RNA–Protein interactions for RNA: ENST00000593048.5

CIRBP-241, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 650 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-241ENST00000593048 ELOBQ15370 118 aa11.29□□□□□ -0.6
CIRBP-241ENST00000593048 ZNRF2Q8NHG8 242 aa11.29□□□□□ -0.6
CIRBP-241ENST00000593048 PYGO2Q9BRQ0 406 aa11.29□□□□□ -0.6
CIRBP-241ENST00000593048 MLST8Q9BVC4 326 aa11.29□□□□□ -0.6
CIRBP-241ENST00000593048 TRAV26-1A0A087WT03 109 aa11.28□□□□□ -0.6
CIRBP-241ENST00000593048 A0A0J9YY99 117 aa11.28□□□□□ -0.6
CIRBP-241ENST00000593048 DIRC3C9JPN6 131 aa11.28□□□□□ -0.6
CIRBP-241ENST00000593048 RAB5AP20339 215 aa11.28□□□□□ -0.6
CIRBP-241ENST00000593048 COX8CQ7Z4L0 72 aa11.28□□□□□ -0.6
CIRBP-241ENST00000593048 TMEM183AQ8IXX5 376 aa11.28□□□□□ -0.6
CIRBP-241ENST00000593048 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.28□□□□□ -0.6
CIRBP-241ENST00000593048 LINC00477Q96M19 166 aa11.28□□□□□ -0.6
CIRBP-241ENST00000593048 ZNF492Q9P255 531 aa11.28□□□□□ -0.6
CIRBP-241ENST00000593048 LINC00588Q9Y4M8 146 aa11.28□□□□□ -0.6
CIRBP-241ENST00000593048 IGLV2-8P01709 118 aa11.27□□□□□ -0.61
CIRBP-241ENST00000593048 COX19Q49B96 90 aa11.27□□□□□ -0.61
CIRBP-241ENST00000593048 CT83Q5H943 113 aa11.27□□□□□ -0.61
CIRBP-241ENST00000593048 SAPCD1Q5SSQ6 148 aa11.27□□□□□ -0.61
CIRBP-241ENST00000593048 EXOC3-AS1Q8N2X6 119 aa11.27□□□□□ -0.61
CIRBP-241ENST00000593048 LINC00612Q8N6U2 182 aa11.27□□□□□ -0.61
CIRBP-241ENST00000593048 NACAE9PAV3 2078 aa11.26□□□□□ -0.61
CIRBP-241ENST00000593048 C7orf71A4D174 169 aa11.26□□□□□ -0.61
CIRBP-241ENST00000593048 TYMSP04818 313 aa11.26□□□□□ -0.61
CIRBP-241ENST00000593048 RNASE4P34096 147 aaKnown RBP11.26□□□□□ -0.61
CIRBP-241ENST00000593048 ERVFC1-1P60608 527 aa11.26□□□□□ -0.61
CIRBP-241ENST00000593048 C6orf223Q8N319 242 aa11.26□□□□□ -0.61
CIRBP-241ENST00000593048 IL36BQ9NZH7 164 aa11.26□□□□□ -0.61
CIRBP-241ENST00000593048 ABCA13Q86UQ4 5058 aa11.26□□□□□ -0.61
CIRBP-241ENST00000593048 TRGV2A0A075B6R0 118 aa11.25□□□□□ -0.61
CIRBP-241ENST00000593048 FAM231BA6NCW3 169 aa11.25□□□□□ -0.61
CIRBP-241ENST00000593048 K7EN84 100 aa11.25□□□□□ -0.61
CIRBP-241ENST00000593048 GPX1P07203 203 aa11.25□□□□□ -0.61
CIRBP-241ENST00000593048 HOXA5P20719 270 aa11.25□□□□□ -0.61
CIRBP-241ENST00000593048 FLI1Q01543 452 aaPredicted RBP11.25□□□□□ -0.61
CIRBP-241ENST00000593048 DAZ2Q13117 558 aaKnown RBP11.25□□□□□ -0.61
CIRBP-241ENST00000593048 IBA57Q5T440 356 aaKnown RBP11.25□□□□□ -0.61
CIRBP-241ENST00000593048 TMEM78Q5T7P6 136 aa11.25□□□□□ -0.61
CIRBP-241ENST00000593048 AGPAT4-IT1Q9H0P7 198 aa11.25□□□□□ -0.61
CIRBP-241ENST00000593048 Q9H8V8 135 aa11.25□□□□□ -0.61
CIRBP-241ENST00000593048 PKD1P98161 4303 aa11.25□□□□□ -0.61
CIRBP-241ENST00000593048 C1orf196B1AJZ1 125 aa11.24□□□□□ -0.61
CIRBP-241ENST00000593048 RAB5BP61020 215 aa11.24□□□□□ -0.61
CIRBP-241ENST00000593048 Q6ZTI0 123 aa11.24□□□□□ -0.61
CIRBP-241ENST00000593048 GOLT1AQ6ZVE7 132 aa11.24□□□□□ -0.61
CIRBP-241ENST00000593048 Q86TA4 180 aa11.24□□□□□ -0.61
CIRBP-241ENST00000593048 ZNF575Q86XF7 245 aa11.24□□□□□ -0.61
CIRBP-241ENST00000593048 GSN-AS1Q9NRJ2 163 aa11.24□□□□□ -0.61
CIRBP-241ENST00000593048 LENEPQ9Y5L5 61 aa11.24□□□□□ -0.61
CIRBP-241ENST00000593048 IGKV2-40A0A087WW87 121 aaPredicted RBP11.23□□□□□ -0.61
CIRBP-241ENST00000593048 TRGV1A0A0A0MS02 117 aa11.23□□□□□ -0.61
CIRBP-241ENST00000593048 KLLNB2CW77 178 aa11.23□□□□□ -0.61
CIRBP-241ENST00000593048 ZNF324O75467 553 aaPredicted RBP11.23□□□□□ -0.61
CIRBP-241ENST00000593048 IGKV2D-40P01614 121 aaPredicted RBP11.23□□□□□ -0.61
CIRBP-241ENST00000593048 IGLV2-11P01706 119 aa11.23□□□□□ -0.61
CIRBP-241ENST00000593048 GNG5P63218 68 aa11.23□□□□□ -0.61
CIRBP-241ENST00000593048 TNP2Q05952 138 aa11.23□□□□□ -0.61
CIRBP-241ENST00000593048 C9orf47Q6ZRZ4 202 aa11.23□□□□□ -0.61
CIRBP-241ENST00000593048 PSG8Q9UQ74 426 aa11.23□□□□□ -0.61
CIRBP-241ENST00000593048 V9GYV3 84 aa11.23□□□□□ -0.61
CIRBP-241ENST00000593048 TRBV7-9A0A0J9YWB2 115 aa11.22□□□□□ -0.61
CIRBP-241ENST00000593048 PGPEP1LA6NFU8 196 aa11.22□□□□□ -0.61
CIRBP-241ENST00000593048 MGST1P10620 155 aaKnown RBP11.22□□□□□ -0.61
CIRBP-241ENST00000593048 RASL11AQ6T310 242 aa11.22□□□□□ -0.61
CIRBP-241ENST00000593048 DAZAP1Q96EP5 407 aaKnown RBP11.22□□□□□ -0.61
CIRBP-241ENST00000593048 FAM19A4Q96LR4 140 aa11.22□□□□□ -0.61
CIRBP-241ENST00000593048 LINC00479Q96M42 142 aa11.22□□□□□ -0.61
CIRBP-241ENST00000593048 NDFIP1Q9BT67 221 aa11.22□□□□□ -0.61
CIRBP-241ENST00000593048 GFRA4Q9GZZ7 299 aa11.22□□□□□ -0.61
CIRBP-241ENST00000593048 H3BNG1 76 aa11.21□□□□□ -0.61
CIRBP-241ENST00000593048 GATCO43716 136 aaKnown RBP11.21□□□□□ -0.61
CIRBP-241ENST00000593048 CRISP2P16562 243 aa11.21□□□□□ -0.61
CIRBP-241ENST00000593048 ESRGQ1W209 222 aa11.21□□□□□ -0.61
CIRBP-241ENST00000593048 ANXA2RQ3ZCQ2 193 aa11.21□□□□□ -0.61
CIRBP-241ENST00000593048 TTC32Q5I0X7 151 aa11.21□□□□□ -0.61
CIRBP-241ENST00000593048 VGLL1Q99990 258 aa11.21□□□□□ -0.61
CIRBP-241ENST00000593048 LINC00467Q9BRT7 94 aa11.21□□□□□ -0.61
CIRBP-241ENST00000593048 TRAV34A0A0B4J273 112 aa11.2□□□□□ -0.62
CIRBP-241ENST00000593048 SMIM27A0A1W2PRY6 76 aa11.2□□□□□ -0.62
CIRBP-241ENST00000593048 C19orf71A6NCJ1 209 aa11.2□□□□□ -0.62
CIRBP-241ENST00000593048 A8MWL6 223 aa11.2□□□□□ -0.62
CIRBP-241ENST00000593048 C16orf90A8MZG2 172 aa11.2□□□□□ -0.62
CIRBP-241ENST00000593048 C11orf72Q8NBR9 251 aa11.2□□□□□ -0.62
CIRBP-241ENST00000593048 TMA7Q9Y2S6 64 aaKnown RBP11.2□□□□□ -0.62
CIRBP-241ENST00000593048 URGCP-MRPS24S4R325 110 aa11.2□□□□□ -0.62
CIRBP-241ENST00000593048 RPS10P46783 165 aaKnown RBP11.19□□□□□ -0.62
CIRBP-241ENST00000593048 ZNF138P52744 262 aa11.19□□□□□ -0.62
CIRBP-241ENST00000593048 Q6AWC8 147 aa11.19□□□□□ -0.62
CIRBP-241ENST00000593048 PRNTQ86SH4 94 aa11.19□□□□□ -0.62
CIRBP-241ENST00000593048 NUDT10Q8NFP7 164 aa11.19□□□□□ -0.62
CIRBP-241ENST00000593048 TSKUQ8WUA8 353 aa11.19□□□□□ -0.62
CIRBP-241ENST00000593048 NUDT11Q96G61 164 aa11.19□□□□□ -0.62
CIRBP-241ENST00000593048 RPH3ALQ9UNE2 315 aa11.19□□□□□ -0.62
CIRBP-241ENST00000593048 IGHV1OR15-1A0A075B7D0 117 aa11.18□□□□□ -0.62
CIRBP-241ENST00000593048 XKRY2A2RUG3 117 aa11.18□□□□□ -0.62
CIRBP-241ENST00000593048 SPINK4O60575 86 aa11.18□□□□□ -0.62
CIRBP-241ENST00000593048 P01737 135 aa11.18□□□□□ -0.62
CIRBP-241ENST00000593048 MT-ND6P03923 174 aa11.18□□□□□ -0.62
CIRBP-241ENST00000593048 CXCL1P09341 107 aa11.18□□□□□ -0.62
CIRBP-241ENST00000593048 TCL1AP56279 114 aa11.18□□□□□ -0.62
CIRBP-241ENST00000593048 ATP5L2Q7Z4Y8 100 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms