RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 G3V318 75 aa11.07□□□□□ -0.64
CCDC43-203ENST00000588210 TNFRSF6BO95407 300 aa11.07□□□□□ -0.64
CCDC43-203ENST00000588210 PPIFP30405 207 aaKnown RBP11.07□□□□□ -0.64
CCDC43-203ENST00000588210 RBX1P62877 108 aa11.07□□□□□ -0.64
CCDC43-203ENST00000588210 METTL26Q96S19 204 aa11.07□□□□□ -0.64
CCDC43-203ENST00000588210 CITED2Q99967 270 aaPredicted RBP11.07□□□□□ -0.64
CCDC43-203ENST00000588210 AGPAT4-IT1Q9H0P7 198 aa11.07□□□□□ -0.64
CCDC43-203ENST00000588210 IGKV3D-20A0A0C4DH25 116 aa11.06□□□□□ -0.64
CCDC43-203ENST00000588210 FCER1GP30273 86 aa11.06□□□□□ -0.64
CCDC43-203ENST00000588210 TCTEX1D4Q5JR98 221 aa11.06□□□□□ -0.64
CCDC43-203ENST00000588210 NDUFA11Q86Y39 141 aa11.06□□□□□ -0.64
CCDC43-203ENST00000588210 U3KQE9 123 aa11.06□□□□□ -0.64
CCDC43-203ENST00000588210 IGHV3-66A0A0C4DH42 116 aa11.05□□□□□ -0.64
CCDC43-203ENST00000588210 C7orf71A4D174 169 aa11.05□□□□□ -0.64
CCDC43-203ENST00000588210 ELANEP08246 267 aa11.05□□□□□ -0.64
CCDC43-203ENST00000588210 HSD52Q0P140 79 aa11.05□□□□□ -0.64
CCDC43-203ENST00000588210 C19orf54Q5BKX5 351 aa11.05□□□□□ -0.64
CCDC43-203ENST00000588210 PSMG4Q5JS54 123 aa11.05□□□□□ -0.64
CCDC43-203ENST00000588210 AMMECR1LQ6DCA0 310 aa11.05□□□□□ -0.64
CCDC43-203ENST00000588210 ATP6V0BQ99437 205 aa11.05□□□□□ -0.64
CCDC43-203ENST00000588210 TSSC4Q9Y5U2 329 aaPredicted RBP11.05□□□□□ -0.64
CCDC43-203ENST00000588210 GAS8-AS1O95177 125 aa11.05□□□□□ -0.64
CCDC43-203ENST00000588210 TMEM78Q5T7P6 136 aa11.05□□□□□ -0.64
CCDC43-203ENST00000588210 C9orf47Q6ZRZ4 202 aa11.05□□□□□ -0.64
CCDC43-203ENST00000588210 C8orf86Q6ZUL3 223 aa11.05□□□□□ -0.64
CCDC43-203ENST00000588210 C11orf21Q9P2W6 132 aa11.05□□□□□ -0.64
CCDC43-203ENST00000588210 LEPP41159 167 aa11.04□□□□□ -0.64
CCDC43-203ENST00000588210 RNF152Q8N8N0 203 aa11.04□□□□□ -0.64
CCDC43-203ENST00000588210 ZMAT4Q9H898 229 aa11.04□□□□□ -0.64
CCDC43-203ENST00000588210 DKK2Q9UBU2 259 aa11.04□□□□□ -0.64
CCDC43-203ENST00000588210 TRAV8-6A0A0B4J262 113 aa11.04□□□□□ -0.64
CCDC43-203ENST00000588210 A6NDN8 102 aa11.04□□□□□ -0.64
CCDC43-203ENST00000588210 IGLV1-40P01703 118 aa11.04□□□□□ -0.64
CCDC43-203ENST00000588210 PSMB8P28062 276 aa11.04□□□□□ -0.64
CCDC43-203ENST00000588210 HIST2H2BDQ6DRA6 164 aa11.04□□□□□ -0.64
CCDC43-203ENST00000588210 ADAMTSL5Q6ZMM2 481 aa11.04□□□□□ -0.64
CCDC43-203ENST00000588210 Q8N8P6 123 aa11.04□□□□□ -0.64
CCDC43-203ENST00000588210 IGLV2-18A0A075B6J9 118 aa11.03□□□□□ -0.64
CCDC43-203ENST00000588210 IGHV7-4-1A0A0J9YVY3 117 aa11.03□□□□□ -0.64
CCDC43-203ENST00000588210 EVI2AP22794 236 aa11.03□□□□□ -0.64
CCDC43-203ENST00000588210 CDKN1BP46527 198 aa11.03□□□□□ -0.64
CCDC43-203ENST00000588210 ODF1Q14990 250 aa11.03□□□□□ -0.64
CCDC43-203ENST00000588210 C18orf15Q96N68 181 aa11.03□□□□□ -0.64
CCDC43-203ENST00000588210 PRSS47A8MTI9 375 aa11.02□□□□□ -0.64
CCDC43-203ENST00000588210 H3BRM9 83 aa11.02□□□□□ -0.64
CCDC43-203ENST00000588210 ATP5G2Q06055 141 aa11.02□□□□□ -0.64
CCDC43-203ENST00000588210 NSUN5P1Q3KNT7 163 aa11.02□□□□□ -0.64
CCDC43-203ENST00000588210 KHDC1LQ5JSQ8 128 aa11.02□□□□□ -0.64
CCDC43-203ENST00000588210 WFDC3Q8IUB2 231 aa11.02□□□□□ -0.64
CCDC43-203ENST00000588210 IGHV4-4A0A075B6R2 117 aa11.02□□□□□ -0.65
CCDC43-203ENST00000588210 IGHV3OR16-13A0A075B7E8 117 aa11.02□□□□□ -0.65
CCDC43-203ENST00000588210 IGHV3-74A0A0B4J1X5 117 aa11.02□□□□□ -0.65
CCDC43-203ENST00000588210 ADARB2-AS1A8MUL3 147 aa11.02□□□□□ -0.65
CCDC43-203ENST00000588210 TRGV3P03979 118 aa11.02□□□□□ -0.65
CCDC43-203ENST00000588210 OR2K2Q8NGT1 345 aa11.02□□□□□ -0.65
CCDC43-203ENST00000588210 IGHV3-49A0A0A0MS15 119 aa11.01□□□□□ -0.65
CCDC43-203ENST00000588210 FAM223BA6NKX1 122 aa11.01□□□□□ -0.65
CCDC43-203ENST00000588210 ZNF207O43670 478 aaKnown RBP11.01□□□□□ -0.65
CCDC43-203ENST00000588210 GATA1P15976 413 aaPredicted RBP11.01□□□□□ -0.65
CCDC43-203ENST00000588210 NMUP48645 174 aa11.01□□□□□ -0.65
CCDC43-203ENST00000588210 SMIM15Q7Z3B0 74 aa11.01□□□□□ -0.65
CCDC43-203ENST00000588210 PCP2Q8IVA1 136 aa11.01□□□□□ -0.65
CCDC43-203ENST00000588210 FAM223AQ8IWN6 122 aa11.01□□□□□ -0.65
CCDC43-203ENST00000588210 TRRAPQ9Y4A5 3859 aa11.01□□□□□ -0.65
CCDC43-203ENST00000588210 C9orf118A6NHY6 69 aa11□□□□□ -0.65
CCDC43-203ENST00000588210 ATP5LO75964 103 aa11□□□□□ -0.65
CCDC43-203ENST00000588210 PF4V1P10720 104 aa11□□□□□ -0.65
CCDC43-203ENST00000588210 NRACQ8N912 160 aa11□□□□□ -0.65
CCDC43-203ENST00000588210 GLMPQ8WWB7 406 aa11□□□□□ -0.65
CCDC43-203ENST00000588210 LENEPQ9Y5L5 61 aa11□□□□□ -0.65
CCDC43-203ENST00000588210 A0A1W2PRX2 142 aa11□□□□□ -0.65
CCDC43-203ENST00000588210 H3BUA1 57 aa11□□□□□ -0.65
CCDC43-203ENST00000588210 BRI3O95415 125 aa11□□□□□ -0.65
CCDC43-203ENST00000588210 TCTAP57738 103 aa11□□□□□ -0.65
CCDC43-203ENST00000588210 LCNL1Q6ZST4 164 aa11□□□□□ -0.65
CCDC43-203ENST00000588210 MYOZ3Q8TDC0 251 aa11□□□□□ -0.65
CCDC43-203ENST00000588210 KLK15Q9H2R5 256 aa11□□□□□ -0.65
CCDC43-203ENST00000588210 CST9LQ9H4G1 147 aa11□□□□□ -0.65
CCDC43-203ENST00000588210 SMPXQ9UHP9 88 aa11□□□□□ -0.65
CCDC43-203ENST00000588210 UBE2E2Q96LR5 201 aa10.99□□□□□ -0.65
CCDC43-203ENST00000588210 HHLA3Q9XRX5 114 aa10.99□□□□□ -0.65
CCDC43-203ENST00000588210 IGKCP01834 107 aa10.99□□□□□ -0.65
CCDC43-203ENST00000588210 KIR3DS1Q14943 382 aa10.99□□□□□ -0.65
CCDC43-203ENST00000588210 C16orf92Q96LL3 132 aa10.99□□□□□ -0.65
CCDC43-203ENST00000588210 HIGD1BQ9P298 99 aa10.99□□□□□ -0.65
CCDC43-203ENST00000588210 PRSS1P07477 247 aa10.98□□□□□ -0.65
CCDC43-203ENST00000588210 HLA-DRB4P13762 266 aa10.98□□□□□ -0.65
CCDC43-203ENST00000588210 UFSP1Q6NVU6 142 aa10.98□□□□□ -0.65
CCDC43-203ENST00000588210 KLHL30-AS1Q8NEE0 82 aa10.98□□□□□ -0.65
CCDC43-203ENST00000588210 HLA-DRB4X5D2U9 266 aa10.98□□□□□ -0.65
CCDC43-203ENST00000588210 DPM2O94777 84 aa10.97□□□□□ -0.65
CCDC43-203ENST00000588210 PCP4P48539 62 aa10.97□□□□□ -0.65
CCDC43-203ENST00000588210 AP1S3Q96PC3 154 aa10.97□□□□□ -0.65
CCDC43-203ENST00000588210 UFC1Q9Y3C8 167 aa10.97□□□□□ -0.65
CCDC43-203ENST00000588210 IGKV2D-26A0A0A0MRZ7 120 aa10.97□□□□□ -0.65
CCDC43-203ENST00000588210 LAGE3Q14657 143 aa10.97□□□□□ -0.65
CCDC43-203ENST00000588210 OCIAD2Q56VL3 154 aa10.97□□□□□ -0.65
CCDC43-203ENST00000588210 PRR9Q5T870 116 aa10.97□□□□□ -0.65
CCDC43-203ENST00000588210 SPANXN1Q5VSR9 72 aa10.97□□□□□ -0.65
CCDC43-203ENST00000588210 GTF2H5Q6ZYL4 71 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms