RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 GSKIPQ9P0R6 139 aa2.33□□□□□ -2.04
TUBD1-208ENST00000588009 LHFPL6Q9Y693 200 aa2.33□□□□□ -2.04
TUBD1-208ENST00000588009 PTPRDP23468 1912 aa2.32□□□□□ -2.04
TUBD1-208ENST00000588009 OR2T1O43869 369 aa2.32□□□□□ -2.04
TUBD1-208ENST00000588009 FKBP2P26885 142 aaKnown RBP2.32□□□□□ -2.04
TUBD1-208ENST00000588009 PRR15Q8IV56 129 aa2.32□□□□□ -2.04
TUBD1-208ENST00000588009 C10orf126Q8N4M7 172 aa2.32□□□□□ -2.04
TUBD1-208ENST00000588009 C3orf56Q8N813 242 aa2.32□□□□□ -2.04
TUBD1-208ENST00000588009 OR9Q1Q8NGQ5 310 aa2.32□□□□□ -2.04
TUBD1-208ENST00000588009 HIST1H2BLQ99880 126 aa2.32□□□□□ -2.04
TUBD1-208ENST00000588009 YIPF3Q9GZM5 350 aa2.32□□□□□ -2.04
TUBD1-208ENST00000588009 C6orf62Q9GZU0 229 aaPredicted RBP2.32□□□□□ -2.04
TUBD1-208ENST00000588009 EPDR1Q9UM22 224 aa2.32□□□□□ -2.04
TUBD1-208ENST00000588009 NUBP2Q9Y5Y2 271 aa2.32□□□□□ -2.04
TUBD1-208ENST00000588009 IGKV1D-42A0A075B6H8 117 aa2.31□□□□□ -2.04
TUBD1-208ENST00000588009 MEIKINA0A087WXM9 373 aa2.31□□□□□ -2.04
TUBD1-208ENST00000588009 TRDV1A0A1B0GX56 115 aa2.31□□□□□ -2.04
TUBD1-208ENST00000588009 TLCD2A6NGC4 264 aa2.31□□□□□ -2.04
TUBD1-208ENST00000588009 CTSDP07339 412 aaPredicted RBP2.31□□□□□ -2.04
TUBD1-208ENST00000588009 GPX2P18283 190 aa2.31□□□□□ -2.04
TUBD1-208ENST00000588009 PSPHP78330 225 aa2.31□□□□□ -2.04
TUBD1-208ENST00000588009 KRTAP13-4Q3LI77 160 aa2.31□□□□□ -2.04
TUBD1-208ENST00000588009 MYO7BQ6PIF6 2116 aa2.31□□□□□ -2.04
TUBD1-208ENST00000588009 ZNF826PQ6ZT77 177 aa2.31□□□□□ -2.04
TUBD1-208ENST00000588009 CANT1Q8WVQ1 401 aa2.31□□□□□ -2.04
TUBD1-208ENST00000588009 BORCS5Q969J3 196 aa2.31□□□□□ -2.04
TUBD1-208ENST00000588009 MRPL32Q9BYC8 188 aaKnown RBP2.31□□□□□ -2.04
TUBD1-208ENST00000588009 TMEM126AQ9H061 195 aa2.31□□□□□ -2.04
TUBD1-208ENST00000588009 OTORQ9NRC9 128 aa2.31□□□□□ -2.04
TUBD1-208ENST00000588009 RASL12Q9NYN1 266 aa2.31□□□□□ -2.04
TUBD1-208ENST00000588009 RNF11Q9Y3C5 154 aa2.31□□□□□ -2.04
TUBD1-208ENST00000588009 MED31Q9Y3C7 131 aa2.31□□□□□ -2.04
TUBD1-208ENST00000588009 INTS1Q8N201 2190 aaKnown RBP2.31□□□□□ -2.04
TUBD1-208ENST00000588009 MUC4Q99102 2169 aa2.3□□□□□ -2.04
TUBD1-208ENST00000588009 S100A11P31949 105 aa2.3□□□□□ -2.04
TUBD1-208ENST00000588009 SRP14P37108 136 aaKnown RBP2.3□□□□□ -2.04
TUBD1-208ENST00000588009 RPS28P62857 69 aaKnown RBP2.3□□□□□ -2.04
TUBD1-208ENST00000588009 EIF5AP63241 154 aaKnown RBP2.3□□□□□ -2.04
TUBD1-208ENST00000588009 ELOBQ15370 118 aa2.3□□□□□ -2.04
TUBD1-208ENST00000588009 OR8B8Q15620 311 aa2.3□□□□□ -2.04
TUBD1-208ENST00000588009 PCOTHQ58A44 107 aa2.3□□□□□ -2.04
TUBD1-208ENST00000588009 C1orf140Q5VVS0 124 aa2.3□□□□□ -2.04
TUBD1-208ENST00000588009 Q6ZRN7 208 aaPredicted RBP2.3□□□□□ -2.04
TUBD1-208ENST00000588009 ANGPTL5Q86XS5 388 aa2.3□□□□□ -2.04
TUBD1-208ENST00000588009 OR4D11Q8NGI4 311 aa2.3□□□□□ -2.04
TUBD1-208ENST00000588009 FOCADQ5VW36 1801 aa2.3□□□□□ -2.04
TUBD1-208ENST00000588009 DLG5Q8TDM6 1919 aa2.3□□□□□ -2.04
TUBD1-208ENST00000588009 ROS1P08922 2347 aa2.29□□□□□ -2.04
TUBD1-208ENST00000588009 USF3Q68DE3 2245 aa2.29□□□□□ -2.04
TUBD1-208ENST00000588009 SCN8AQ9UQD0 1980 aa2.29□□□□□ -2.04
TUBD1-208ENST00000588009 ODAMA1E959 279 aa2.29□□□□□ -2.04
TUBD1-208ENST00000588009 C7orf71A4D174 169 aa2.29□□□□□ -2.04
TUBD1-208ENST00000588009 OVOL1O14753 267 aa2.29□□□□□ -2.04
TUBD1-208ENST00000588009 PIN1P1O15428 100 aa2.29□□□□□ -2.04
TUBD1-208ENST00000588009 BCL2P10415 239 aa2.29□□□□□ -2.04
TUBD1-208ENST00000588009 MSMO1Q15800 293 aa2.29□□□□□ -2.04
TUBD1-208ENST00000588009 RTL8BQ17RB0 113 aa2.29□□□□□ -2.04
TUBD1-208ENST00000588009 COA5Q86WW8 74 aa2.29□□□□□ -2.04
TUBD1-208ENST00000588009 AQP3Q92482 292 aa2.29□□□□□ -2.04
TUBD1-208ENST00000588009 BORCS8Q96FH0 119 aa2.29□□□□□ -2.04
TUBD1-208ENST00000588009 FAM107BQ9H098 131 aa2.29□□□□□ -2.04
TUBD1-208ENST00000588009 SPANXA1Q9NS26 97 aa2.29□□□□□ -2.04
TUBD1-208ENST00000588009 LAMTOR3Q9UHA4 124 aa2.29□□□□□ -2.04
TUBD1-208ENST00000588009 TRAPPC2LQ9UL33 140 aa2.29□□□□□ -2.04
TUBD1-208ENST00000588009 SRRM2Q9UQ35 2752 aaKnown RBP2.29□□□□□ -2.04
TUBD1-208ENST00000588009 DOCK10Q96BY6 2186 aa2.29□□□□□ -2.04
TUBD1-208ENST00000588009 A0A1B0GX51 115 aa2.28□□□□□ -2.04
TUBD1-208ENST00000588009 ARL5CA6NH57 179 aa2.28□□□□□ -2.04
TUBD1-208ENST00000588009 GABARAPH6UMI1 98 aa2.28□□□□□ -2.04
TUBD1-208ENST00000588009 J3KT08 172 aa2.28□□□□□ -2.04
TUBD1-208ENST00000588009 DEGS1O15121 323 aa2.28□□□□□ -2.04
TUBD1-208ENST00000588009 GGCTO75223 188 aaKnown RBP2.28□□□□□ -2.04
TUBD1-208ENST00000588009 CXCL1P09341 107 aa2.28□□□□□ -2.04
TUBD1-208ENST00000588009 UBBP0CG47 229 aa2.28□□□□□ -2.04
TUBD1-208ENST00000588009 AKR1C3P42330 323 aa2.28□□□□□ -2.04
TUBD1-208ENST00000588009 DYNLT3P51808 116 aa2.28□□□□□ -2.04
TUBD1-208ENST00000588009 KRTAP12-1P59990 96 aa2.28□□□□□ -2.04
TUBD1-208ENST00000588009 UBE2BP63146 152 aa2.28□□□□□ -2.04
TUBD1-208ENST00000588009 RHOGP84095 191 aa2.28□□□□□ -2.04
TUBD1-208ENST00000588009 Q1T7F1 81 aa2.28□□□□□ -2.04
TUBD1-208ENST00000588009 DEFB109BQ30KR1 87 aa2.28□□□□□ -2.04
TUBD1-208ENST00000588009 BCL2L15Q5TBC7 163 aa2.28□□□□□ -2.04
TUBD1-208ENST00000588009 C22orf39Q6P5X5 142 aa2.28□□□□□ -2.04
TUBD1-208ENST00000588009 TCEAL4Q96EI5 215 aa2.28□□□□□ -2.04
TUBD1-208ENST00000588009 SLC25A21Q9BQT8 299 aaPredicted RBP2.28□□□□□ -2.04
TUBD1-208ENST00000588009 TNRC6AQ8NDV7 1962 aaKnown RBP2.28□□□□□ -2.04
TUBD1-208ENST00000588009 CADP27708 2225 aa2.27□□□□□ -2.05
TUBD1-208ENST00000588009 TRAV36DV7A0A075B6V5 113 aa2.27□□□□□ -2.05
TUBD1-208ENST00000588009 LCE6AA0A183 80 aa2.27□□□□□ -2.05
TUBD1-208ENST00000588009 GADD45GO95257 159 aa2.27□□□□□ -2.05
TUBD1-208ENST00000588009 FAM107AO95990 144 aa2.27□□□□□ -2.05
TUBD1-208ENST00000588009 GPX1P07203 203 aa2.27□□□□□ -2.05
TUBD1-208ENST00000588009 PLCXD2Q0VAA5 305 aa2.27□□□□□ -2.05
TUBD1-208ENST00000588009 ZNF846Q147U1 533 aa2.27□□□□□ -2.05
TUBD1-208ENST00000588009 SOSTDC1Q6X4U4 206 aa2.27□□□□□ -2.05
TUBD1-208ENST00000588009 PDZD9Q8IXQ8 264 aa2.27□□□□□ -2.05
TUBD1-208ENST00000588009 YPEL2Q96QA6 119 aa2.27□□□□□ -2.05
TUBD1-208ENST00000588009 NHP2Q9NX24 153 aaKnown RBP2.27□□□□□ -2.05
TUBD1-208ENST00000588009 TAS2R4Q9NYW5 299 aa2.27□□□□□ -2.05
TUBD1-208ENST00000588009 LAMTOR2Q9Y2Q5 125 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms