RNA–Protein interactions for RNA: ENST00000587718.5

CAPNS1-204, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-204ENST00000587718 MAP1LC3AQ9H492 121 aa19.09■□□□□ 0.65
CAPNS1-204ENST00000587718 OR4C46A6NHA9 309 aa19.08■□□□□ 0.65
CAPNS1-204ENST00000587718 IFI27P40305 119 aaPredicted RBP19.08■□□□□ 0.65
CAPNS1-204ENST00000587718 NXT2Q9NPJ8 142 aaKnown RBP19.08■□□□□ 0.65
CAPNS1-204ENST00000587718 EREGO14944 169 aa19.07■□□□□ 0.64
CAPNS1-204ENST00000587718 ODF3Q96PU9 254 aa19.07■□□□□ 0.64
CAPNS1-204ENST00000587718 MS4A6AQ9H2W1 248 aa19.07■□□□□ 0.64
CAPNS1-204ENST00000587718 ZMAT5Q9UDW3 170 aaKnown RBP19.07■□□□□ 0.64
CAPNS1-204ENST00000587718 LGALS1P09382 135 aaKnown RBP19.06■□□□□ 0.64
CAPNS1-204ENST00000587718 TM4SF20Q53R12 229 aa19.06■□□□□ 0.64
CAPNS1-204ENST00000587718 MRPS16Q9Y3D3 137 aaKnown RBP19.06■□□□□ 0.64
CAPNS1-204ENST00000587718 HBDP02042 147 aa19.06■□□□□ 0.64
CAPNS1-204ENST00000587718 TCTEX1D4Q5JR98 221 aa19.06■□□□□ 0.64
CAPNS1-204ENST00000587718 NPYP01303 97 aa19.05■□□□□ 0.64
CAPNS1-204ENST00000587718 UBE2E2Q96LR5 201 aa19.05■□□□□ 0.64
CAPNS1-204ENST00000587718 OXLD1Q5BKU9 147 aa19.04■□□□□ 0.64
CAPNS1-204ENST00000587718 LINC00173Q6ZV60 143 aa19.04■□□□□ 0.64
CAPNS1-204ENST00000587718 DPF1Q92782 380 aa19.04■□□□□ 0.64
CAPNS1-204ENST00000587718 HSBP1L1C9JCN9 74 aa19.03■□□□□ 0.64
CAPNS1-204ENST00000587718 NUTF2P61970 127 aaKnown RBP19.03■□□□□ 0.64
CAPNS1-204ENST00000587718 MSRB1Q9NZV6 116 aa19.03■□□□□ 0.64
CAPNS1-204ENST00000587718 A0A096LNJ9 63 aa19.02■□□□□ 0.64
CAPNS1-204ENST00000587718 RPL11P62913 178 aaKnown RBP19.02■□□□□ 0.64
CAPNS1-204ENST00000587718 WFDC9Q8NEX5 89 aa19.02■□□□□ 0.64
CAPNS1-204ENST00000587718 DCANP1Q8TF63 244 aa19.02■□□□□ 0.64
CAPNS1-204ENST00000587718 MRAP2Q96G30 205 aa19.02■□□□□ 0.64
CAPNS1-204ENST00000587718 IGLL1P15814 213 aa19.02■□□□□ 0.63
CAPNS1-204ENST00000587718 HNRNPA3P51991 378 aaKnown RBP19.02■□□□□ 0.63
CAPNS1-204ENST00000587718 SSTP61278 116 aa19.02■□□□□ 0.63
CAPNS1-204ENST00000587718 PSMG4Q5JS54 123 aa19.02■□□□□ 0.63
CAPNS1-204ENST00000587718 PRR9Q5T870 116 aa19.02■□□□□ 0.63
CAPNS1-204ENST00000587718 LCNL1Q6ZST4 164 aa19.02■□□□□ 0.63
CAPNS1-204ENST00000587718 NOTCH3Q9UM47 2321 aa19.01■□□□□ 0.63
CAPNS1-204ENST00000587718 MUC21A0A0G2JKD1 596 aa19.01■□□□□ 0.63
CAPNS1-204ENST00000587718 MUC21A0A140T8X8 626 aa19.01■□□□□ 0.63
CAPNS1-204ENST00000587718 A0A1B0GV90 55 aa19.01■□□□□ 0.63
CAPNS1-204ENST00000587718 TNFRSF6BO95407 300 aa19.01■□□□□ 0.63
CAPNS1-204ENST00000587718 PRB2P02812 416 aaPredicted RBP19.01■□□□□ 0.63
CAPNS1-204ENST00000587718 LGALS9BQ3B8N2 356 aa19.01■□□□□ 0.63
CAPNS1-204ENST00000587718 MUC21Q5SSG8 566 aa19.01■□□□□ 0.63
CAPNS1-204ENST00000587718 LGALS9CQ6DKI2 356 aa19.01■□□□□ 0.63
CAPNS1-204ENST00000587718 Q6ZN92 141 aa19.01■□□□□ 0.63
CAPNS1-204ENST00000587718 ASIPP42127 132 aa19■□□□□ 0.63
CAPNS1-204ENST00000587718 SPANXN1Q5VSR9 72 aa19■□□□□ 0.63
CAPNS1-204ENST00000587718 C10orf99Q6UWK7 81 aa19■□□□□ 0.63
CAPNS1-204ENST00000587718 SCRT2Q9NQ03 307 aa19■□□□□ 0.63
CAPNS1-204ENST00000587718 LOC389332A0A1B0GUA5 103 aa18.99■□□□□ 0.63
CAPNS1-204ENST00000587718 KLLNB2CW77 178 aa18.99■□□□□ 0.63
CAPNS1-204ENST00000587718 ATOH7Q8N100 152 aa18.99■□□□□ 0.63
CAPNS1-204ENST00000587718 Q8N8P6 123 aa18.99■□□□□ 0.63
CAPNS1-204ENST00000587718 A0A1W2PRX2 142 aa18.98■□□□□ 0.63
CAPNS1-204ENST00000587718 TSPOP30536 169 aa18.98■□□□□ 0.63
CAPNS1-204ENST00000587718 TSSC4Q9Y5U2 329 aaPredicted RBP18.98■□□□□ 0.63
CAPNS1-204ENST00000587718 RPLP1P05386 114 aaKnown RBP18.97■□□□□ 0.63
CAPNS1-204ENST00000587718 FCER1GP30273 86 aa18.97■□□□□ 0.63
CAPNS1-204ENST00000587718 LEPP41159 167 aa18.97■□□□□ 0.63
CAPNS1-204ENST00000587718 OR2K2Q8NGT1 345 aa18.97■□□□□ 0.63
CAPNS1-204ENST00000587718 SMKR1H3BMG3 65 aa18.96■□□□□ 0.63
CAPNS1-204ENST00000587718 PMCHL2Q9BQD1 86 aa18.96■□□□□ 0.63
CAPNS1-204ENST00000587718 NXPH4O95158 308 aa18.95■□□□□ 0.62
CAPNS1-204ENST00000587718 NCR2O95944 276 aa18.95■□□□□ 0.62
CAPNS1-204ENST00000587718 SNRPD3P62318 126 aaKnown RBP18.95■□□□□ 0.62
CAPNS1-204ENST00000587718 LINC00469Q8N7U9 141 aa18.95■□□□□ 0.62
CAPNS1-204ENST00000587718 H3BVH4 76 aa18.94■□□□□ 0.62
CAPNS1-204ENST00000587718 K7EMI3 77 aa18.94■□□□□ 0.62
CAPNS1-204ENST00000587718 K7EQG2 157 aa18.94■□□□□ 0.62
CAPNS1-204ENST00000587718 DNAH3Q8TD57 4116 aa18.94■□□□□ 0.62
CAPNS1-204ENST00000587718 M0R381 172 aa18.93■□□□□ 0.62
CAPNS1-204ENST00000587718 PPP1R17O96001 155 aa18.93■□□□□ 0.62
CAPNS1-204ENST00000587718 EVI2AP22794 236 aa18.93■□□□□ 0.62
CAPNS1-204ENST00000587718 S100A4P26447 101 aaKnown RBP18.93■□□□□ 0.62
CAPNS1-204ENST00000587718 MAJINQ3KP22 176 aa18.93■□□□□ 0.62
CAPNS1-204ENST00000587718 COL5A1-AS1Q5SY13 56 aa18.93■□□□□ 0.62
CAPNS1-204ENST00000587718 IFI27L1Q96BM0 104 aa18.93■□□□□ 0.62
CAPNS1-204ENST00000587718 IGLV2-18A0A075B6J9 118 aa18.93■□□□□ 0.62
CAPNS1-204ENST00000587718 ANXA2RQ3ZCQ2 193 aa18.93■□□□□ 0.62
CAPNS1-204ENST00000587718 NRACQ8N912 160 aa18.93■□□□□ 0.62
CAPNS1-204ENST00000587718 OR1N2Q8NGR9 330 aa18.93■□□□□ 0.62
CAPNS1-204ENST00000587718 TRAV2A0A0B4J234 112 aa18.92■□□□□ 0.62
CAPNS1-204ENST00000587718 DUSP14O95147 198 aaKnown RBP18.92■□□□□ 0.62
CAPNS1-204ENST00000587718 DPH3P1Q9H4G8 78 aa18.92■□□□□ 0.62
CAPNS1-204ENST00000587718 RNASE4P34096 147 aaKnown RBP18.91■□□□□ 0.62
CAPNS1-204ENST00000587718 POM121L12Q8N7R1 296 aa18.91■□□□□ 0.62
CAPNS1-204ENST00000587718 SLC25A34Q6PIV7 304 aa18.9■□□□□ 0.62
CAPNS1-204ENST00000587718 C20orf78Q9BR46 151 aa18.9■□□□□ 0.62
CAPNS1-204ENST00000587718 PHLDA3Q9Y5J5 127 aa18.9■□□□□ 0.62
CAPNS1-204ENST00000587718 GOLT1BQ9Y3E0 138 aa18.89■□□□□ 0.62
CAPNS1-204ENST00000587718 IGHV4OR15-8A0A075B7B6 117 aa18.89■□□□□ 0.61
CAPNS1-204ENST00000587718 A0A087WW49 117 aa18.89■□□□□ 0.61
CAPNS1-204ENST00000587718 A0A0J9YX75 114 aa18.89■□□□□ 0.61
CAPNS1-204ENST00000587718 F6UB75 175 aa18.89■□□□□ 0.61
CAPNS1-204ENST00000587718 MRAPQ8TCY5 172 aa18.89■□□□□ 0.61
CAPNS1-204ENST00000587718 ATP5LO75964 103 aa18.88■□□□□ 0.61
CAPNS1-204ENST00000587718 PF4P02776 101 aa18.88■□□□□ 0.61
CAPNS1-204ENST00000587718 HOXD3P31249 432 aaPredicted RBP18.88■□□□□ 0.61
CAPNS1-204ENST00000587718 KIR3DS1Q14943 382 aa18.88■□□□□ 0.61
CAPNS1-204ENST00000587718 AP1S3Q96PC3 154 aa18.88■□□□□ 0.61
CAPNS1-204ENST00000587718 hDV102S1A0JD36 115 aa18.87■□□□□ 0.61
CAPNS1-204ENST00000587718 C7orf71A4D174 169 aa18.86■□□□□ 0.61
CAPNS1-204ENST00000587718 SYNJ2BPP57105 145 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms