RNA–Protein interactions for RNA: ENST00000587223.1

NPC1-206, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-206ENST00000587223 PCNPQ8WW12 178 aaKnown RBP4.61□□□□□ -1.67
NPC1-206ENST00000587223 BIN3Q9NQY0 253 aa4.61□□□□□ -1.67
NPC1-206ENST00000587223 MUC4Q99102 2169 aa4.6□□□□□ -1.67
NPC1-206ENST00000587223 TRAV26-1A0A087WT03 109 aa4.6□□□□□ -1.67
NPC1-206ENST00000587223 TRGV4A0A0C4DH28 118 aa4.6□□□□□ -1.67
NPC1-206ENST00000587223 A0A0J9YY99 117 aa4.6□□□□□ -1.67
NPC1-206ENST00000587223 PGPEP1LA6NFU8 196 aa4.6□□□□□ -1.67
NPC1-206ENST00000587223 NUDT3O95989 172 aa4.6□□□□□ -1.67
NPC1-206ENST00000587223 ARMS2P0C7Q2 107 aa4.6□□□□□ -1.67
NPC1-206ENST00000587223 SLAQ13239 276 aa4.6□□□□□ -1.67
NPC1-206ENST00000587223 LGALS9CQ6DKI2 356 aa4.6□□□□□ -1.67
NPC1-206ENST00000587223 C15orf53Q8NAA6 179 aa4.6□□□□□ -1.67
NPC1-206ENST00000587223 OR4C5Q8NGB2 326 aa4.6□□□□□ -1.67
NPC1-206ENST00000587223 LINC00476Q8WZB0 136 aa4.6□□□□□ -1.67
NPC1-206ENST00000587223 PTH2Q96A98 100 aa4.6□□□□□ -1.67
NPC1-206ENST00000587223 SMIM12Q96EX1 92 aa4.6□□□□□ -1.67
NPC1-206ENST00000587223 C9orf85Q96MD7 179 aa4.6□□□□□ -1.67
NPC1-206ENST00000587223 FAM210AQ96ND0 272 aa4.6□□□□□ -1.67
NPC1-206ENST00000587223 IL36BQ9NZH7 164 aa4.6□□□□□ -1.67
NPC1-206ENST00000587223 HHLA3Q9XRX5 114 aa4.6□□□□□ -1.67
NPC1-206ENST00000587223 PHLDA3Q9Y5J5 127 aa4.6□□□□□ -1.67
NPC1-206ENST00000587223 TRAV4A0A0B4J268 109 aa4.59□□□□□ -1.67
NPC1-206ENST00000587223 H3BVH4 76 aa4.59□□□□□ -1.67
NPC1-206ENST00000587223 PAX4O43316 350 aa4.59□□□□□ -1.67
NPC1-206ENST00000587223 NDUFS6O75380 124 aaKnown RBP4.59□□□□□ -1.67
NPC1-206ENST00000587223 IGLV2-8P01709 118 aa4.59□□□□□ -1.67
NPC1-206ENST00000587223 SRP19P09132 144 aaKnown RBP4.59□□□□□ -1.67
NPC1-206ENST00000587223 SFTA3P0C7M3 94 aa4.59□□□□□ -1.67
NPC1-206ENST00000587223 P0DMU3 169 aa4.59□□□□□ -1.67
NPC1-206ENST00000587223 FAM231AP0DMU4 169 aa4.59□□□□□ -1.67
NPC1-206ENST00000587223 FAM231CP0DMU5 169 aa4.59□□□□□ -1.67
NPC1-206ENST00000587223 RPL19P84098 196 aaKnown RBP4.59□□□□□ -1.67
NPC1-206ENST00000587223 FHL2Q14192 279 aa4.59□□□□□ -1.67
NPC1-206ENST00000587223 PEA15Q15121 130 aa4.59□□□□□ -1.67
NPC1-206ENST00000587223 DNLZQ5SXM8 178 aa4.59□□□□□ -1.67
NPC1-206ENST00000587223 UBE2DNLQ8IWF7 75 aa4.59□□□□□ -1.67
NPC1-206ENST00000587223 SYT8Q8NBV8 401 aa4.59□□□□□ -1.67
NPC1-206ENST00000587223 OCC1Q8TAD7 63 aa4.59□□□□□ -1.67
NPC1-206ENST00000587223 ZNF479Q96JC4 524 aa4.59□□□□□ -1.67
NPC1-206ENST00000587223 PARLQ9H300 379 aa4.59□□□□□ -1.67
NPC1-206ENST00000587223 CDIP1Q9H305 208 aa4.59□□□□□ -1.67
NPC1-206ENST00000587223 TENM2Q9NT68 2774 aa4.59□□□□□ -1.67
NPC1-206ENST00000587223 PRO0255Q9UI72 69 aa4.59□□□□□ -1.67
NPC1-206ENST00000587223 TRBV20OR9-2A0A075B6H5 130 aa4.58□□□□□ -1.68
NPC1-206ENST00000587223 LOC100996750A0A140TA64 210 aa4.58□□□□□ -1.68
NPC1-206ENST00000587223 XKRY2A2RUG3 117 aa4.58□□□□□ -1.68
NPC1-206ENST00000587223 ZNF727A8MUV8 499 aa4.58□□□□□ -1.68
NPC1-206ENST00000587223 A8MWV9 139 aa4.58□□□□□ -1.68
NPC1-206ENST00000587223 H3BNG1 76 aa4.58□□□□□ -1.68
NPC1-206ENST00000587223 ZNF561-AS1K7EIQ3 104 aa4.58□□□□□ -1.68
NPC1-206ENST00000587223 RS1O15537 224 aa4.58□□□□□ -1.68
NPC1-206ENST00000587223 CIDEAO60543 219 aa4.58□□□□□ -1.68
NPC1-206ENST00000587223 P01737 135 aa4.58□□□□□ -1.68
NPC1-206ENST00000587223 CRYBA4P53673 196 aa4.58□□□□□ -1.68
NPC1-206ENST00000587223 CCL18P55774 89 aa4.58□□□□□ -1.68
NPC1-206ENST00000587223 RPS20P60866 119 aaKnown RBP4.58□□□□□ -1.68
NPC1-206ENST00000587223 SSTP61278 116 aa4.58□□□□□ -1.68
NPC1-206ENST00000587223 PIK3CD-AS1Q5SR53 167 aa4.58□□□□□ -1.68
NPC1-206ENST00000587223 CFAP126Q5VTH2 177 aa4.58□□□□□ -1.68
NPC1-206ENST00000587223 ZNF575Q86XF7 245 aa4.58□□□□□ -1.68
NPC1-206ENST00000587223 ZFP82Q8N141 532 aa4.58□□□□□ -1.68
NPC1-206ENST00000587223 POM121L12Q8N7R1 296 aa4.58□□□□□ -1.68
NPC1-206ENST00000587223 CLRN3Q8NCR9 226 aa4.58□□□□□ -1.68
NPC1-206ENST00000587223 NUDT10Q8NFP7 164 aa4.58□□□□□ -1.68
NPC1-206ENST00000587223 OR2D3Q8NGH3 330 aa4.58□□□□□ -1.68
NPC1-206ENST00000587223 NUDT11Q96G61 164 aa4.58□□□□□ -1.68
NPC1-206ENST00000587223 SMIM7Q9BQ49 75 aa4.58□□□□□ -1.68
NPC1-206ENST00000587223 KRTAP4-6Q9BYQ5 205 aa4.58□□□□□ -1.68
NPC1-206ENST00000587223 IGHV3-73A0A0B4J1V6 119 aa4.57□□□□□ -1.68
NPC1-206ENST00000587223 C19orf71A6NCJ1 209 aa4.57□□□□□ -1.68
NPC1-206ENST00000587223 M0R381 172 aa4.57□□□□□ -1.68
NPC1-206ENST00000587223 CXCL1P09341 107 aa4.57□□□□□ -1.68
NPC1-206ENST00000587223 MED14OSP0DP75 135 aa4.57□□□□□ -1.68
NPC1-206ENST00000587223 MRPL23Q16540 153 aaKnown RBP4.57□□□□□ -1.68
NPC1-206ENST00000587223 RNF212Q495C1 297 aa4.57□□□□□ -1.68
NPC1-206ENST00000587223 FAM74A3Q4VXF1 159 aa4.57□□□□□ -1.68
NPC1-206ENST00000587223 SPANXN1Q5VSR9 72 aa4.57□□□□□ -1.68
NPC1-206ENST00000587223 VSIG2Q96IQ7 327 aa4.57□□□□□ -1.68
NPC1-206ENST00000587223 SMDT1Q9H4I9 107 aa4.57□□□□□ -1.68
NPC1-206ENST00000587223 SCRT2Q9NQ03 307 aa4.57□□□□□ -1.68
NPC1-206ENST00000587223 ICOSQ9Y6W8 199 aa4.57□□□□□ -1.68
NPC1-206ENST00000587223 LY96Q9Y6Y9 160 aa4.57□□□□□ -1.68
NPC1-206ENST00000587223 DNAH7Q8WXX0 4024 aa4.56□□□□□ -1.68
NPC1-206ENST00000587223 A0A096LPF7 62 aa4.56□□□□□ -1.68
NPC1-206ENST00000587223 MUC21A0A0G2JKD1 596 aa4.56□□□□□ -1.68
NPC1-206ENST00000587223 MUC21A0A140T8X8 626 aa4.56□□□□□ -1.68
NPC1-206ENST00000587223 C9JQL5 133 aa4.56□□□□□ -1.68
NPC1-206ENST00000587223 K7EN84 100 aa4.56□□□□□ -1.68
NPC1-206ENST00000587223 GATCO43716 136 aaKnown RBP4.56□□□□□ -1.68
NPC1-206ENST00000587223 OR5AL1P0C617 328 aa4.56□□□□□ -1.68
NPC1-206ENST00000587223 GZMBP10144 247 aa4.56□□□□□ -1.68
NPC1-206ENST00000587223 GYPEP15421 78 aa4.56□□□□□ -1.68
NPC1-206ENST00000587223 GATA1P15976 413 aaPredicted RBP4.56□□□□□ -1.68
NPC1-206ENST00000587223 ERVFC1-1P60608 527 aa4.56□□□□□ -1.68
NPC1-206ENST00000587223 SRSF3P84103 164 aaKnown RBP4.56□□□□□ -1.68
NPC1-206ENST00000587223 TMEM241Q24JQ0 296 aa4.56□□□□□ -1.68
NPC1-206ENST00000587223 CLLU1Q5K131 121 aa4.56□□□□□ -1.68
NPC1-206ENST00000587223 ZFP2Q6ZN57 461 aa4.56□□□□□ -1.68
NPC1-206ENST00000587223 SFRP2Q96HF1 295 aa4.56□□□□□ -1.68
NPC1-206ENST00000587223 PRADC1Q9BSG0 188 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms