RNA–Protein interactions for RNA: ENST00000587173.5

VAT1-205, Transcript of vesicle amine transport 1, humanhuman

TSL 2 BASIC

Gene VAT1, Length 1,174 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-205ENST00000587173 PRADC1Q9BSG0 188 aa10.6□□□□□ -0.71
VAT1-205ENST00000587173 TRAV8-6A0A0B4J262 113 aa10.59□□□□□ -0.71
VAT1-205ENST00000587173 IGHV3-38A0A0C4DH36 116 aa10.59□□□□□ -0.71
VAT1-205ENST00000587173 LOC100131303A0A0U1RQF7 123 aa10.59□□□□□ -0.71
VAT1-205ENST00000587173 PSCAO43653 123 aa10.59□□□□□ -0.71
VAT1-205ENST00000587173 TCRAP04437 139 aa10.59□□□□□ -0.71
VAT1-205ENST00000587173 STAG3L2P0CL84 134 aa10.59□□□□□ -0.71
VAT1-205ENST00000587173 STAG3L3P0CL85 134 aa10.59□□□□□ -0.71
VAT1-205ENST00000587173 NKX2-5P52952 324 aaPredicted RBP10.59□□□□□ -0.71
VAT1-205ENST00000587173 DPPA3Q6W0C5 159 aa10.59□□□□□ -0.71
VAT1-205ENST00000587173 RAB24Q969Q5 203 aa10.59□□□□□ -0.71
VAT1-205ENST00000587173 FAT1Q14517 4588 aa10.59□□□□□ -0.71
VAT1-205ENST00000587173 CTXND1A0A1B0GTU2 59 aa10.58□□□□□ -0.72
VAT1-205ENST00000587173 CXorf1O96002 111 aa10.58□□□□□ -0.72
VAT1-205ENST00000587173 GCGP01275 180 aa10.58□□□□□ -0.72
VAT1-205ENST00000587173 GCSHP23434 173 aa10.58□□□□□ -0.72
VAT1-205ENST00000587173 RAB5CP51148 216 aa10.58□□□□□ -0.72
VAT1-205ENST00000587173 PSG8Q9UQ74 426 aa10.58□□□□□ -0.72
VAT1-205ENST00000587173 TRBV6-4A0A1B0GX49 114 aa10.57□□□□□ -0.72
VAT1-205ENST00000587173 GCHFRP30047 84 aa10.57□□□□□ -0.72
VAT1-205ENST00000587173 SUMO1P63165 101 aaKnown RBP10.57□□□□□ -0.72
VAT1-205ENST00000587173 RHOHQ15669 191 aa10.57□□□□□ -0.72
VAT1-205ENST00000587173 SMUG1Q53HV7 270 aa10.57□□□□□ -0.72
VAT1-205ENST00000587173 OR10J3Q5JRS4 329 aa10.57□□□□□ -0.72
VAT1-205ENST00000587173 SLC25A29Q8N8R3 303 aa10.57□□□□□ -0.72
VAT1-205ENST00000587173 TMEM167BQ9NRX6 74 aa10.57□□□□□ -0.72
VAT1-205ENST00000587173 RS1O15537 224 aa10.56□□□□□ -0.72
VAT1-205ENST00000587173 FLI1Q01543 452 aaPredicted RBP10.56□□□□□ -0.72
VAT1-205ENST00000587173 LINC01556Q5JQF7 62 aa10.56□□□□□ -0.72
VAT1-205ENST00000587173 SAPCD1Q5SSQ6 148 aa10.56□□□□□ -0.72
VAT1-205ENST00000587173 CFAP126Q5VTH2 177 aa10.56□□□□□ -0.72
VAT1-205ENST00000587173 PRNTQ86SH4 94 aa10.56□□□□□ -0.72
VAT1-205ENST00000587173 EPDR1Q9UM22 224 aa10.56□□□□□ -0.72
VAT1-205ENST00000587173 IBA57-AS1B1ANH7 110 aa10.55□□□□□ -0.72
VAT1-205ENST00000587173 SMR3BP02814 79 aaPredicted RBP10.55□□□□□ -0.72
VAT1-205ENST00000587173 ZNF80P51504 273 aaPredicted RBP10.55□□□□□ -0.72
VAT1-205ENST00000587173 CYB561D1Q8N8Q1 229 aa10.55□□□□□ -0.72
VAT1-205ENST00000587173 FAM213BQ8TBF2 198 aa10.55□□□□□ -0.72
VAT1-205ENST00000587173 SUN5Q8TC36 379 aa10.55□□□□□ -0.72
VAT1-205ENST00000587173 PTH2Q96A98 100 aa10.55□□□□□ -0.72
VAT1-205ENST00000587173 IGLV5-52A0A0A0MRZ9 124 aa10.54□□□□□ -0.72
VAT1-205ENST00000587173 IGHV3-73A0A0B4J1V6 119 aa10.54□□□□□ -0.72
VAT1-205ENST00000587173 MAP1LC3B2A6NCE7 125 aa10.54□□□□□ -0.72
VAT1-205ENST00000587173 TEX46H3BTG2 121 aa10.54□□□□□ -0.72
VAT1-205ENST00000587173 HAMPP81172 84 aa10.54□□□□□ -0.72
VAT1-205ENST00000587173 MAP1LC3BQ9GZQ8 125 aa10.54□□□□□ -0.72
VAT1-205ENST00000587173 C11orf21Q9P2W6 132 aa10.54□□□□□ -0.72
VAT1-205ENST00000587173 LRCOL1A6NCL2 159 aa10.53□□□□□ -0.72
VAT1-205ENST00000587173 MGST1P10620 155 aaKnown RBP10.53□□□□□ -0.72
VAT1-205ENST00000587173 SULT1A2P50226 295 aa10.53□□□□□ -0.72
VAT1-205ENST00000587173 LELP1Q5T871 98 aa10.53□□□□□ -0.72
VAT1-205ENST00000587173 TMEM75Q8N9X5 138 aa10.53□□□□□ -0.72
VAT1-205ENST00000587173 ATP6V0E2Q8NHE4 81 aa10.53□□□□□ -0.72
VAT1-205ENST00000587173 C9orf85Q96MD7 179 aa10.53□□□□□ -0.72
VAT1-205ENST00000587173 A0A1W2PRE2 83 aa10.52□□□□□ -0.73
VAT1-205ENST00000587173 PGPEP1LA6NFU8 196 aa10.52□□□□□ -0.73
VAT1-205ENST00000587173 IGLV2-11P01706 119 aa10.52□□□□□ -0.73
VAT1-205ENST00000587173 H2AFB1P0C5Y9 115 aa10.52□□□□□ -0.73
VAT1-205ENST00000587173 S100A4P26447 101 aaKnown RBP10.52□□□□□ -0.73
VAT1-205ENST00000587173 ZNF726P1Q15940 193 aa10.52□□□□□ -0.73
VAT1-205ENST00000587173 ZNF506Q5JVG8 444 aa10.52□□□□□ -0.73
VAT1-205ENST00000587173 NTN5Q8WTR8 489 aaPredicted RBP10.52□□□□□ -0.73
VAT1-205ENST00000587173 SFT2D1Q8WV19 159 aa10.52□□□□□ -0.73
VAT1-205ENST00000587173 MBD3L1Q8WWY6 194 aa10.52□□□□□ -0.73
VAT1-205ENST00000587173 GTSF1LQ9H1H1 148 aa10.52□□□□□ -0.73
VAT1-205ENST00000587173 Q9HAA7 133 aa10.52□□□□□ -0.73
VAT1-205ENST00000587173 FABP5P3A8MUU1 101 aa10.51□□□□□ -0.73
VAT1-205ENST00000587173 A8MWV9 139 aa10.51□□□□□ -0.73
VAT1-205ENST00000587173 GGTLC3B5MD39 225 aa10.51□□□□□ -0.73
VAT1-205ENST00000587173 IFNA7P01567 189 aa10.51□□□□□ -0.73
VAT1-205ENST00000587173 IGHV3-30P01768 117 aa10.51□□□□□ -0.73
VAT1-205ENST00000587173 IGHV3-33P01772 117 aa10.51□□□□□ -0.73
VAT1-205ENST00000587173 IGHV3-30-3P0DP02 117 aa10.51□□□□□ -0.73
VAT1-205ENST00000587173 IGHV3-30-5P0DP03 117 aa10.51□□□□□ -0.73
VAT1-205ENST00000587173 FHITP49789 147 aa10.51□□□□□ -0.73
VAT1-205ENST00000587173 TMEM70Q9BUB7 260 aa10.51□□□□□ -0.73
VAT1-205ENST00000587173 TM2D2Q9BX73 214 aa10.51□□□□□ -0.73
VAT1-205ENST00000587173 VPS13BQ7Z7G8 4022 aa10.51□□□□□ -0.73
VAT1-205ENST00000587173 FAM229AH3BQW9 127 aa10.5□□□□□ -0.73
VAT1-205ENST00000587173 RNASE3P12724 160 aaKnown RBP10.5□□□□□ -0.73
VAT1-205ENST00000587173 FGF8P55075 233 aaPredicted RBP10.5□□□□□ -0.73
VAT1-205ENST00000587173 ALKAL2Q6UX46 152 aa10.5□□□□□ -0.73
VAT1-205ENST00000587173 ZFP2Q6ZN57 461 aa10.5□□□□□ -0.73
VAT1-205ENST00000587173 Q8N814 137 aa10.5□□□□□ -0.73
VAT1-205ENST00000587173 NKX6-2Q9C056 277 aaPredicted RBP10.5□□□□□ -0.73
VAT1-205ENST00000587173 ASIPP42127 132 aa10.49□□□□□ -0.73
VAT1-205ENST00000587173 PIK3CD-AS1Q5SR53 167 aa10.49□□□□□ -0.73
VAT1-205ENST00000587173 Q6ZSN1 163 aa10.49□□□□□ -0.73
VAT1-205ENST00000587173 TRAV1-1A0A0B4J248 108 aa10.48□□□□□ -0.73
VAT1-205ENST00000587173 TRAV34A0A0B4J273 112 aa10.48□□□□□ -0.73
VAT1-205ENST00000587173 BLOC1S1P78537 153 aa10.48□□□□□ -0.73
VAT1-205ENST00000587173 LINC00479Q96M42 142 aa10.48□□□□□ -0.73
VAT1-205ENST00000587173 PARLQ9H300 379 aa10.48□□□□□ -0.73
VAT1-205ENST00000587173 ARL2-SNX15V9GYD0 113 aa10.48□□□□□ -0.73
VAT1-205ENST00000587173 DMBT1Q9UGM3 2413 aaPredicted RBP10.48□□□□□ -0.73
VAT1-205ENST00000587173 MYCBP2O75592 4640 aa10.47□□□□□ -0.73
VAT1-205ENST00000587173 IGKV3D-20A0A0C4DH25 116 aa10.47□□□□□ -0.73
VAT1-205ENST00000587173 GAGE12JA6NER3 117 aa10.47□□□□□ -0.73
VAT1-205ENST00000587173 GAGE1Q13065 139 aa10.47□□□□□ -0.73
VAT1-205ENST00000587173 GAGE4Q13068 117 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms