RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 SPART-AS1P0CW21 52 aa11.53□□□□□ -0.56
ATG4D-205ENST00000586477 AZU1P20160 251 aa11.53□□□□□ -0.56
ATG4D-205ENST00000586477 LGALS9BQ3B8N2 356 aa11.53□□□□□ -0.56
ATG4D-205ENST00000586477 SLC7A5P1Q8MH63 180 aa11.53□□□□□ -0.56
ATG4D-205ENST00000586477 C11orf72Q8NBR9 251 aa11.53□□□□□ -0.56
ATG4D-205ENST00000586477 GFRA4Q9GZZ7 299 aa11.53□□□□□ -0.56
ATG4D-205ENST00000586477 F2Z2F3 143 aa11.52□□□□□ -0.57
ATG4D-205ENST00000586477 EMP1P54849 157 aa11.52□□□□□ -0.57
ATG4D-205ENST00000586477 SYT8Q8NBV8 401 aa11.52□□□□□ -0.57
ATG4D-205ENST00000586477 GSN-AS1Q9NRJ2 163 aa11.52□□□□□ -0.57
ATG4D-205ENST00000586477 M0R2P5 195 aa11.51□□□□□ -0.57
ATG4D-205ENST00000586477 SNAPINO95295 136 aa11.51□□□□□ -0.57
ATG4D-205ENST00000586477 OR5AL1P0C617 328 aa11.51□□□□□ -0.57
ATG4D-205ENST00000586477 RPL19P84098 196 aaKnown RBP11.51□□□□□ -0.57
ATG4D-205ENST00000586477 RHEBQ15382 184 aa11.51□□□□□ -0.57
ATG4D-205ENST00000586477 PIK3CD-AS1Q5SR53 167 aa11.51□□□□□ -0.57
ATG4D-205ENST00000586477 FER1L6-AS1Q8NA97 138 aa11.51□□□□□ -0.57
ATG4D-205ENST00000586477 TSKUQ8WUA8 353 aa11.51□□□□□ -0.57
ATG4D-205ENST00000586477 PTH2Q96A98 100 aa11.51□□□□□ -0.57
ATG4D-205ENST00000586477 BORCS7Q96B45 105 aa11.51□□□□□ -0.57
ATG4D-205ENST00000586477 C9orf85Q96MD7 179 aa11.51□□□□□ -0.57
ATG4D-205ENST00000586477 CTDSP1Q9GZU7 261 aa11.51□□□□□ -0.57
ATG4D-205ENST00000586477 MDFICQ9P1T7 246 aa11.51□□□□□ -0.57
ATG4D-205ENST00000586477 PHLDA3Q9Y5J5 127 aa11.51□□□□□ -0.57
ATG4D-205ENST00000586477 BIRC6Q9NR09 4857 aa11.51□□□□□ -0.57
ATG4D-205ENST00000586477 PLAC8L1A1L4L8 177 aa11.5□□□□□ -0.57
ATG4D-205ENST00000586477 GRIFINA4D1Z8 144 aa11.5□□□□□ -0.57
ATG4D-205ENST00000586477 CXorf65A6NEN9 183 aa11.5□□□□□ -0.57
ATG4D-205ENST00000586477 H3BVH4 76 aa11.5□□□□□ -0.57
ATG4D-205ENST00000586477 APOC3P02656 99 aa11.5□□□□□ -0.57
ATG4D-205ENST00000586477 ARMS2P0C7Q2 107 aa11.5□□□□□ -0.57
ATG4D-205ENST00000586477 NOP10Q9NPE3 64 aaKnown RBP11.5□□□□□ -0.57
ATG4D-205ENST00000586477 DKK2Q9UBU2 259 aa11.5□□□□□ -0.57
ATG4D-205ENST00000586477 DEFB4AO15263 64 aa11.49□□□□□ -0.57
ATG4D-205ENST00000586477 SNAI2O43623 268 aa11.49□□□□□ -0.57
ATG4D-205ENST00000586477 PRM2P04554 102 aa11.49□□□□□ -0.57
ATG4D-205ENST00000586477 RNASE3P12724 160 aaKnown RBP11.49□□□□□ -0.57
ATG4D-205ENST00000586477 CACNG7P62955 275 aa11.49□□□□□ -0.57
ATG4D-205ENST00000586477 FAM222AQ5U5X8 452 aa11.49□□□□□ -0.57
ATG4D-205ENST00000586477 CEMP1Q6PRD7 247 aaPredicted RBP11.49□□□□□ -0.57
ATG4D-205ENST00000586477 ZFP82Q8N141 532 aa11.49□□□□□ -0.57
ATG4D-205ENST00000586477 SSBP4Q9BWG4 385 aaPredicted RBP11.49□□□□□ -0.57
ATG4D-205ENST00000586477 V9GYV3 84 aa11.49□□□□□ -0.57
ATG4D-205ENST00000586477 DNAH10Q8IVF4 4471 aa11.49□□□□□ -0.57
ATG4D-205ENST00000586477 SPINK4O60575 86 aa11.48□□□□□ -0.57
ATG4D-205ENST00000586477 IGLC6P0CF74 106 aa11.48□□□□□ -0.57
ATG4D-205ENST00000586477 RNF212Q495C1 297 aa11.48□□□□□ -0.57
ATG4D-205ENST00000586477 WDR73Q6P4I2 378 aa11.48□□□□□ -0.57
ATG4D-205ENST00000586477 CLRN3Q8NCR9 226 aa11.48□□□□□ -0.57
ATG4D-205ENST00000586477 C11orf45Q8TAV5 145 aa11.48□□□□□ -0.57
ATG4D-205ENST00000586477 SCRT2Q9NQ03 307 aa11.48□□□□□ -0.57
ATG4D-205ENST00000586477 TMEM242Q9NWH2 141 aa11.48□□□□□ -0.57
ATG4D-205ENST00000586477 NAT8BQ9UHF3 227 aa11.48□□□□□ -0.57
ATG4D-205ENST00000586477 A0A087WWC5 75 aa11.47□□□□□ -0.57
ATG4D-205ENST00000586477 TRGV1A0A0A0MS02 117 aa11.47□□□□□ -0.57
ATG4D-205ENST00000586477 CTRLP40313 264 aa11.47□□□□□ -0.57
ATG4D-205ENST00000586477 FOXA3P55318 350 aaPredicted RBP11.47□□□□□ -0.57
ATG4D-205ENST00000586477 NANOS2P60321 138 aaKnown RBP11.47□□□□□ -0.57
ATG4D-205ENST00000586477 DAD1P61803 113 aa11.47□□□□□ -0.57
ATG4D-205ENST00000586477 ZNF876PQ49A33 203 aa11.47□□□□□ -0.57
ATG4D-205ENST00000586477 SPANXN1Q5VSR9 72 aa11.47□□□□□ -0.57
ATG4D-205ENST00000586477 RASL10AQ92737 203 aa11.47□□□□□ -0.57
ATG4D-205ENST00000586477 C18orf15Q96N68 181 aa11.47□□□□□ -0.57
ATG4D-205ENST00000586477 TPPP3Q9BW30 176 aa11.47□□□□□ -0.57
ATG4D-205ENST00000586477 TRGV2A0A075B6R0 118 aa11.46□□□□□ -0.57
ATG4D-205ENST00000586477 NUPR2A6NF83 97 aa11.46□□□□□ -0.57
ATG4D-205ENST00000586477 CIDEAO60543 219 aa11.46□□□□□ -0.57
ATG4D-205ENST00000586477 PHLDA1Q8WV24 401 aaPredicted RBP11.46□□□□□ -0.57
ATG4D-205ENST00000586477 LINC00476Q8WZB0 136 aa11.46□□□□□ -0.57
ATG4D-205ENST00000586477 IMMP2LQ96T52 175 aa11.46□□□□□ -0.57
ATG4D-205ENST00000586477 FRAS1Q86XX4 4008 aa11.46□□□□□ -0.58
ATG4D-205ENST00000586477 SMIM27A0A1W2PRY6 76 aa11.45□□□□□ -0.58
ATG4D-205ENST00000586477 HIGD1CA8MV81 97 aa11.45□□□□□ -0.58
ATG4D-205ENST00000586477 A8MWV9 139 aa11.45□□□□□ -0.58
ATG4D-205ENST00000586477 GZMBP10144 247 aa11.45□□□□□ -0.58
ATG4D-205ENST00000586477 KCNIP4Q6PIL6 250 aa11.45□□□□□ -0.58
ATG4D-205ENST00000586477 LINC00612Q8N6U2 182 aa11.45□□□□□ -0.58
ATG4D-205ENST00000586477 C7orf77A4D0Y5 90 aa11.44□□□□□ -0.58
ATG4D-205ENST00000586477 NXPH4O95158 308 aa11.44□□□□□ -0.58
ATG4D-205ENST00000586477 LY6G6CO95867 125 aa11.44□□□□□ -0.58
ATG4D-205ENST00000586477 DEFB130BP0DP73 79 aa11.44□□□□□ -0.58
ATG4D-205ENST00000586477 DEFB130AP0DP74 79 aa11.44□□□□□ -0.58
ATG4D-205ENST00000586477 S100PP25815 95 aa11.44□□□□□ -0.58
ATG4D-205ENST00000586477 LYZL1Q6UWQ5 148 aa11.44□□□□□ -0.58
ATG4D-205ENST00000586477 Q6ZTI0 123 aa11.44□□□□□ -0.58
ATG4D-205ENST00000586477 ZNF575Q86XF7 245 aa11.44□□□□□ -0.58
ATG4D-205ENST00000586477 CNFNQ9BYD5 112 aa11.44□□□□□ -0.58
ATG4D-205ENST00000586477 RPS10P5Q9NQ39 176 aa11.44□□□□□ -0.58
ATG4D-205ENST00000586477 MRPL16Q9NX20 251 aaKnown RBP11.44□□□□□ -0.58
ATG4D-205ENST00000586477 IGHV4-4A0A075B6R2 117 aa11.43□□□□□ -0.58
ATG4D-205ENST00000586477 GAGE12BA1L429 117 aa11.43□□□□□ -0.58
ATG4D-205ENST00000586477 M0R381 172 aa11.43□□□□□ -0.58
ATG4D-205ENST00000586477 GAGE7O76087 117 aa11.43□□□□□ -0.58
ATG4D-205ENST00000586477 TRGC1P0CF51 173 aa11.43□□□□□ -0.58
ATG4D-205ENST00000586477 GAGE12FP0CL80 117 aa11.43□□□□□ -0.58
ATG4D-205ENST00000586477 GAGE12GP0CL81 117 aa11.43□□□□□ -0.58
ATG4D-205ENST00000586477 GAGE12IP0CL82 117 aa11.43□□□□□ -0.58
ATG4D-205ENST00000586477 SMIM15Q7Z3B0 74 aa11.43□□□□□ -0.58
ATG4D-205ENST00000586477 GTSF1Q8WW33 167 aa11.43□□□□□ -0.58
ATG4D-205ENST00000586477 AP1S3Q96PC3 154 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms