RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 SGK494Q96LW2 274 aa7.57□□□□□ -1.2
CCDC47-206ENST00000584112 SH3BGRL3Q9H299 93 aa7.57□□□□□ -1.2
CCDC47-206ENST00000584112 EPDR1Q9UM22 224 aa7.57□□□□□ -1.2
CCDC47-206ENST00000584112 PSG8Q9UQ74 426 aa7.57□□□□□ -1.2
CCDC47-206ENST00000584112 FXYD6-FXYD2A0A087WZ82 144 aa7.56□□□□□ -1.2
CCDC47-206ENST00000584112 A0A1W2PRE2 83 aa7.56□□□□□ -1.2
CCDC47-206ENST00000584112 GGTLC3B5MD39 225 aa7.56□□□□□ -1.2
CCDC47-206ENST00000584112 GAS8-AS1O95177 125 aa7.56□□□□□ -1.2
CCDC47-206ENST00000584112 ERVFC1-1P60608 527 aa7.56□□□□□ -1.2
CCDC47-206ENST00000584112 Q5BKY6 102 aa7.56□□□□□ -1.2
CCDC47-206ENST00000584112 SAPCD1Q5SSQ6 148 aa7.56□□□□□ -1.2
CCDC47-206ENST00000584112 RPL7L1Q6DKI1 246 aaKnown RBP7.56□□□□□ -1.2
CCDC47-206ENST00000584112 TNXBP22105 4242 aa7.55□□□□□ -1.2
CCDC47-206ENST00000584112 CTXND1A0A1B0GTU2 59 aa7.55□□□□□ -1.2
CCDC47-206ENST00000584112 RNF222A6NCQ9 220 aa7.55□□□□□ -1.2
CCDC47-206ENST00000584112 DNAH10OSP0CZ25 163 aa7.55□□□□□ -1.2
CCDC47-206ENST00000584112 GATA1P15976 413 aaPredicted RBP7.55□□□□□ -1.2
CCDC47-206ENST00000584112 PPT1P50897 306 aa7.55□□□□□ -1.2
CCDC47-206ENST00000584112 ZNF80P51504 273 aaPredicted RBP7.55□□□□□ -1.2
CCDC47-206ENST00000584112 ZNF876PQ49A33 203 aa7.55□□□□□ -1.2
CCDC47-206ENST00000584112 PRNTQ86SH4 94 aa7.55□□□□□ -1.2
CCDC47-206ENST00000584112 C10orf126Q8N4M7 172 aa7.55□□□□□ -1.2
CCDC47-206ENST00000584112 NHLRC2Q8NBF2 726 aa7.55□□□□□ -1.2
CCDC47-206ENST00000584112 OR2T35Q8NGX2 323 aa7.55□□□□□ -1.2
CCDC47-206ENST00000584112 TMEM238LA0A1B0GVL6 79 aa7.54□□□□□ -1.2
CCDC47-206ENST00000584112 RS1O15537 224 aa7.54□□□□□ -1.2
CCDC47-206ENST00000584112 IFNA7P01567 189 aa7.54□□□□□ -1.2
CCDC47-206ENST00000584112 IGLV2-11P01706 119 aa7.54□□□□□ -1.2
CCDC47-206ENST00000584112 TIRAPP58753 221 aa7.54□□□□□ -1.2
CCDC47-206ENST00000584112 RHOHQ15669 191 aa7.54□□□□□ -1.2
CCDC47-206ENST00000584112 AKR1C8PQ5T2L2 129 aa7.54□□□□□ -1.2
CCDC47-206ENST00000584112 LELP1Q5T871 98 aa7.54□□□□□ -1.2
CCDC47-206ENST00000584112 WFDC10BQ8IUB3 73 aa7.54□□□□□ -1.2
CCDC47-206ENST00000584112 PTH2Q96A98 100 aa7.54□□□□□ -1.2
CCDC47-206ENST00000584112 C9orf85Q96MD7 179 aa7.54□□□□□ -1.2
CCDC47-206ENST00000584112 PRADC1Q9BSG0 188 aa7.54□□□□□ -1.2
CCDC47-206ENST00000584112 NKX6-2Q9C056 277 aaPredicted RBP7.54□□□□□ -1.2
CCDC47-206ENST00000584112 MSRB1Q9NZV6 116 aa7.54□□□□□ -1.2
CCDC47-206ENST00000584112 C11orf21Q9P2W6 132 aa7.54□□□□□ -1.2
CCDC47-206ENST00000584112 FSIP2Q5CZC0 6907 aa7.54□□□□□ -1.2
CCDC47-206ENST00000584112 LOC100131303A0A0U1RQF7 123 aa7.53□□□□□ -1.2
CCDC47-206ENST00000584112 TRBV6-4A0A1B0GX49 114 aa7.53□□□□□ -1.2
CCDC47-206ENST00000584112 RGS21Q2M5E4 152 aa7.53□□□□□ -1.2
CCDC47-206ENST00000584112 CFAP126Q5VTH2 177 aa7.53□□□□□ -1.2
CCDC47-206ENST00000584112 CDPF1Q6NVV7 123 aa7.53□□□□□ -1.2
CCDC47-206ENST00000584112 FABP5P3A8MUU1 101 aa7.52□□□□□ -1.21
CCDC47-206ENST00000584112 CRYGDP07320 174 aa7.52□□□□□ -1.21
CCDC47-206ENST00000584112 S100A4P26447 101 aaKnown RBP7.52□□□□□ -1.21
CCDC47-206ENST00000584112 KRTAP10-1P60331 282 aa7.52□□□□□ -1.21
CCDC47-206ENST00000584112 ZNF726P1Q15940 193 aa7.52□□□□□ -1.21
CCDC47-206ENST00000584112 ZNF506Q5JVG8 444 aa7.52□□□□□ -1.21
CCDC47-206ENST00000584112 SLC25A29Q8N8R3 303 aa7.52□□□□□ -1.21
CCDC47-206ENST00000584112 HIST1H2BAQ96A08 127 aa7.52□□□□□ -1.21
CCDC47-206ENST00000584112 CRCT1Q9UGL9 99 aa7.52□□□□□ -1.21
CCDC47-206ENST00000584112 TNFRSF18Q9Y5U5 241 aa7.52□□□□□ -1.21
CCDC47-206ENST00000584112 TRAV8-6A0A0B4J262 113 aa7.51□□□□□ -1.21
CCDC47-206ENST00000584112 TRAV34A0A0B4J273 112 aa7.51□□□□□ -1.21
CCDC47-206ENST00000584112 IGHV3-38A0A0C4DH36 116 aa7.51□□□□□ -1.21
CCDC47-206ENST00000584112 PGPEP1LA6NFU8 196 aa7.51□□□□□ -1.21
CCDC47-206ENST00000584112 FAM74A7A6NL05 159 aa7.51□□□□□ -1.21
CCDC47-206ENST00000584112 PEX7O00628 323 aa7.51□□□□□ -1.21
CCDC47-206ENST00000584112 MGST1P10620 155 aaKnown RBP7.51□□□□□ -1.21
CCDC47-206ENST00000584112 RNASE3P12724 160 aaKnown RBP7.51□□□□□ -1.21
CCDC47-206ENST00000584112 FGF8P55075 233 aaPredicted RBP7.51□□□□□ -1.21
CCDC47-206ENST00000584112 UBE2G2P60604 165 aa7.51□□□□□ -1.21
CCDC47-206ENST00000584112 PIK3CD-AS1Q5SR53 167 aa7.51□□□□□ -1.21
CCDC47-206ENST00000584112 Q86TA4 180 aa7.51□□□□□ -1.21
CCDC47-206ENST00000584112 ARL2-SNX15V9GYD0 113 aa7.51□□□□□ -1.21
CCDC47-206ENST00000584112 A0A087WTM6 91 aa7.5□□□□□ -1.21
CCDC47-206ENST00000584112 IGHV3-73A0A0B4J1V6 119 aa7.5□□□□□ -1.21
CCDC47-206ENST00000584112 MAP1LC3B2A6NCE7 125 aa7.5□□□□□ -1.21
CCDC47-206ENST00000584112 A8MWV9 139 aa7.5□□□□□ -1.21
CCDC47-206ENST00000584112 ARPC5O15511 151 aa7.5□□□□□ -1.21
CCDC47-206ENST00000584112 LINC01556Q5JQF7 62 aa7.5□□□□□ -1.21
CCDC47-206ENST00000584112 OR10J3Q5JRS4 329 aa7.5□□□□□ -1.21
CCDC47-206ENST00000584112 DPPA3Q6W0C5 159 aa7.5□□□□□ -1.21
CCDC47-206ENST00000584112 ZFP2Q6ZN57 461 aa7.5□□□□□ -1.21
CCDC47-206ENST00000584112 STOML3Q8TAV4 291 aa7.5□□□□□ -1.21
CCDC47-206ENST00000584112 LINC00479Q96M42 142 aa7.5□□□□□ -1.21
CCDC47-206ENST00000584112 TCEAL7Q9BRU2 100 aa7.5□□□□□ -1.21
CCDC47-206ENST00000584112 MAP1LC3BQ9GZQ8 125 aa7.5□□□□□ -1.21
CCDC47-206ENST00000584112 ZFP30Q9Y2G7 519 aa7.5□□□□□ -1.21
CCDC47-206ENST00000584112 IGKV3D-20A0A0C4DH25 116 aa7.49□□□□□ -1.21
CCDC47-206ENST00000584112 B4DEV8 164 aa7.49□□□□□ -1.21
CCDC47-206ENST00000584112 G3V3Q6 166 aa7.49□□□□□ -1.21
CCDC47-206ENST00000584112 PSCAO43653 123 aa7.49□□□□□ -1.21
CCDC47-206ENST00000584112 UBE2G1P62253 170 aa7.49□□□□□ -1.21
CCDC47-206ENST00000584112 LGALSLQ3ZCW2 172 aaPredicted RBP7.49□□□□□ -1.21
CCDC47-206ENST00000584112 DEFB104AQ8WTQ1 72 aa7.49□□□□□ -1.21
CCDC47-206ENST00000584112 FMC1Q96HJ9 113 aa7.49□□□□□ -1.21
CCDC47-206ENST00000584112 GTSF1LQ9H1H1 148 aa7.49□□□□□ -1.21
CCDC47-206ENST00000584112 IL36BQ9NZH7 164 aa7.49□□□□□ -1.21
CCDC47-206ENST00000584112 FHITP49789 147 aa7.48□□□□□ -1.21
CCDC47-206ENST00000584112 DNLZQ5SXM8 178 aa7.48□□□□□ -1.21
CCDC47-206ENST00000584112 ATP6V0E2Q8NHE4 81 aa7.48□□□□□ -1.21
CCDC47-206ENST00000584112 PARLQ9H300 379 aa7.48□□□□□ -1.21
CCDC47-206ENST00000584112 CYTL1Q9NRR1 136 aa7.48□□□□□ -1.21
CCDC47-206ENST00000584112 IBA57-AS1B1ANH7 110 aa7.47□□□□□ -1.21
CCDC47-206ENST00000584112 RHODO00212 210 aa7.47□□□□□ -1.21
CCDC47-206ENST00000584112 OXTP01178 125 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms