RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 ACTR3CQ9C0K3 210 aaPredicted RBP3.58□□□□□ -1.84
VAPA-207ENST00000583879 NIT2Q9NQR4 276 aa3.58□□□□□ -1.84
VAPA-207ENST00000583879 KLF12Q9Y4X4 402 aa3.58□□□□□ -1.84
VAPA-207ENST00000583879 PXMP4Q9Y6I8 212 aa3.58□□□□□ -1.84
VAPA-207ENST00000583879 C7orf71A4D174 169 aa3.57□□□□□ -1.84
VAPA-207ENST00000583879 KLLNB2CW77 178 aa3.57□□□□□ -1.84
VAPA-207ENST00000583879 K7EN84 100 aa3.57□□□□□ -1.84
VAPA-207ENST00000583879 K7EQD1 137 aa3.57□□□□□ -1.84
VAPA-207ENST00000583879 AGPAT2O15120 278 aa3.57□□□□□ -1.84
VAPA-207ENST00000583879 MPDU1O75352 247 aa3.57□□□□□ -1.84
VAPA-207ENST00000583879 EIF3GO75821 320 aaKnown RBP eCLIP3.57□□□□□ -1.84
VAPA-207ENST00000583879 C1QBP02746 253 aa3.57□□□□□ -1.84
VAPA-207ENST00000583879 IGLC2P0DOY2 106 aa3.57□□□□□ -1.84
VAPA-207ENST00000583879 ZNF25P17030 456 aaPredicted RBP3.57□□□□□ -1.84
VAPA-207ENST00000583879 RRAS2P62070 204 aaPredicted RBP3.57□□□□□ -1.84
VAPA-207ENST00000583879 CD300CQ08708 224 aa3.57□□□□□ -1.84
VAPA-207ENST00000583879 SLC38A11Q08AI6 406 aa3.57□□□□□ -1.84
VAPA-207ENST00000583879 ERCC8Q13216 396 aa3.57□□□□□ -1.84
VAPA-207ENST00000583879 PPP1R1AQ13522 171 aa3.57□□□□□ -1.84
VAPA-207ENST00000583879 CNPY1Q3B7I2 92 aa3.57□□□□□ -1.84
VAPA-207ENST00000583879 IBA57Q5T440 356 aaKnown RBP3.57□□□□□ -1.84
VAPA-207ENST00000583879 MORN5Q5VZ52 161 aa3.57□□□□□ -1.84
VAPA-207ENST00000583879 TMEM14EPQ6UXP3 125 aa3.57□□□□□ -1.84
VAPA-207ENST00000583879 WFDC10BQ8IUB3 73 aa3.57□□□□□ -1.84
VAPA-207ENST00000583879 C10orf126Q8N4M7 172 aa3.57□□□□□ -1.84
VAPA-207ENST00000583879 NTN5Q8WTR8 489 aaPredicted RBP3.57□□□□□ -1.84
VAPA-207ENST00000583879 FAM19A4Q96LR4 140 aa3.57□□□□□ -1.84
VAPA-207ENST00000583879 LINC00477Q96M19 166 aa3.57□□□□□ -1.84
VAPA-207ENST00000583879 SOSTQ9BQB4 213 aa3.57□□□□□ -1.84
VAPA-207ENST00000583879 SLC25A21Q9BQT8 299 aaPredicted RBP3.57□□□□□ -1.84
VAPA-207ENST00000583879 AGPAT4-IT1Q9H0P7 198 aa3.57□□□□□ -1.84
VAPA-207ENST00000583879 RSL24D1Q9UHA3 163 aaKnown RBP3.57□□□□□ -1.84
VAPA-207ENST00000583879 TP53TG3Q9ULZ0 132 aa3.57□□□□□ -1.84
VAPA-207ENST00000583879 SRRM2Q9UQ35 2752 aaKnown RBP3.57□□□□□ -1.84
VAPA-207ENST00000583879 UBR4Q5T4S7 5183 aa3.56□□□□□ -1.84
VAPA-207ENST00000583879 TRAV5A0A0B4J249 113 aa3.56□□□□□ -1.84
VAPA-207ENST00000583879 TRGV4A0A0C4DH28 118 aa3.56□□□□□ -1.84
VAPA-207ENST00000583879 IGSF23A1L1A6 192 aa3.56□□□□□ -1.84
VAPA-207ENST00000583879 CCDC160A6NGH7 325 aa3.56□□□□□ -1.84
VAPA-207ENST00000583879 E5RGE8 158 aa3.56□□□□□ -1.84
VAPA-207ENST00000583879 PSCAO43653 123 aa3.56□□□□□ -1.84
VAPA-207ENST00000583879 PDE6DO43924 150 aa3.56□□□□□ -1.84
VAPA-207ENST00000583879 COX7A2P2O60397 106 aa3.56□□□□□ -1.84
VAPA-207ENST00000583879 ZNF253O75346 499 aa3.56□□□□□ -1.84
VAPA-207ENST00000583879 IFNA1P01562 189 aa3.56□□□□□ -1.84
VAPA-207ENST00000583879 GPX1P07203 203 aa3.56□□□□□ -1.84
VAPA-207ENST00000583879 CRYGDP07320 174 aa3.56□□□□□ -1.84
VAPA-207ENST00000583879 NMBP08949 121 aa3.56□□□□□ -1.84
VAPA-207ENST00000583879 GATA1P15976 413 aaPredicted RBP3.56□□□□□ -1.84
VAPA-207ENST00000583879 PVALBP20472 110 aaPredicted RBP3.56□□□□□ -1.84
VAPA-207ENST00000583879 SRIP30626 198 aa3.56□□□□□ -1.84
VAPA-207ENST00000583879 RNASE4P34096 147 aaKnown RBP3.56□□□□□ -1.84
VAPA-207ENST00000583879 FAUP35544 74 aaKnown RBP3.56□□□□□ -1.84
VAPA-207ENST00000583879 ZNF415Q09FC8 603 aa3.56□□□□□ -1.84
VAPA-207ENST00000583879 BTN1A1Q13410 526 aa3.56□□□□□ -1.84
VAPA-207ENST00000583879 OPCMLQ14982 345 aa3.56□□□□□ -1.84
VAPA-207ENST00000583879 C10orf113Q5VZT2 155 aa3.56□□□□□ -1.84
VAPA-207ENST00000583879 Q6ZRG5 221 aa3.56□□□□□ -1.84
VAPA-207ENST00000583879 Q8N814 137 aa3.56□□□□□ -1.84
VAPA-207ENST00000583879 ATP5SQ99766 215 aa3.56□□□□□ -1.84
VAPA-207ENST00000583879 VGLL1Q99990 258 aa3.56□□□□□ -1.84
VAPA-207ENST00000583879 MLST8Q9BVC4 326 aa3.56□□□□□ -1.84
VAPA-207ENST00000583879 WFDC1Q9HC57 220 aa3.56□□□□□ -1.84
VAPA-207ENST00000583879 MRPL16Q9NX20 251 aaKnown RBP3.56□□□□□ -1.84
VAPA-207ENST00000583879 FLG2Q5D862 2391 aaPredicted RBP3.55□□□□□ -1.84
VAPA-207ENST00000583879 TRBV19A0A075B6N1 114 aa3.55□□□□□ -1.84
VAPA-207ENST00000583879 IGHV1OR15-1A0A075B7D0 117 aa3.55□□□□□ -1.84
VAPA-207ENST00000583879 IGHV3-38A0A0C4DH36 116 aa3.55□□□□□ -1.84
VAPA-207ENST00000583879 IBA57-AS1B1ANH7 110 aa3.55□□□□□ -1.84
VAPA-207ENST00000583879 M0R3E3 92 aa3.55□□□□□ -1.84
VAPA-207ENST00000583879 SSSCA1O60232 199 aa3.55□□□□□ -1.84
VAPA-207ENST00000583879 TYMSP04818 313 aa3.55□□□□□ -1.84
VAPA-207ENST00000583879 CRISP2P16562 243 aa3.55□□□□□ -1.84
VAPA-207ENST00000583879 TNFSF8P32971 234 aa3.55□□□□□ -1.84
VAPA-207ENST00000583879 SULT1A1P50225 295 aa3.55□□□□□ -1.84
VAPA-207ENST00000583879 SULT1A2P50226 295 aa3.55□□□□□ -1.84
VAPA-207ENST00000583879 TAS2R30P59541 319 aa3.55□□□□□ -1.84
VAPA-207ENST00000583879 ARL16Q0P5N6 197 aa3.55□□□□□ -1.84
VAPA-207ENST00000583879 GAGE2BQ13066 116 aa3.55□□□□□ -1.84
VAPA-207ENST00000583879 UBE2V1Q13404 147 aa3.55□□□□□ -1.84
VAPA-207ENST00000583879 TAL2Q16559 108 aa3.55□□□□□ -1.84
VAPA-207ENST00000583879 GAGE2EQ4V326 116 aa3.55□□□□□ -1.84
VAPA-207ENST00000583879 GAGE2AQ6NT46 116 aa3.55□□□□□ -1.84
VAPA-207ENST00000583879 Q6ZQT7 251 aa3.55□□□□□ -1.84
VAPA-207ENST00000583879 TOMM5Q8N4H5 51 aa3.55□□□□□ -1.84
VAPA-207ENST00000583879 LYPD6BQ8NI32 183 aa3.55□□□□□ -1.84
VAPA-207ENST00000583879 RAB2BQ8WUD1 216 aa3.55□□□□□ -1.84
VAPA-207ENST00000583879 MGST2Q99735 147 aa3.55□□□□□ -1.84
VAPA-207ENST00000583879 CCDC32Q9BV29 185 aa3.55□□□□□ -1.84
VAPA-207ENST00000583879 GAGE2DQ9UEU5 116 aa3.55□□□□□ -1.84
VAPA-207ENST00000583879 RCL1Q9Y2P8 373 aaKnown RBP3.55□□□□□ -1.84
VAPA-207ENST00000583879 NDUFB4O95168 129 aa3.54□□□□□ -1.84
VAPA-207ENST00000583879 OXTP01178 125 aa3.54□□□□□ -1.84
VAPA-207ENST00000583879 GIPP09681 153 aaPredicted RBP3.54□□□□□ -1.84
VAPA-207ENST00000583879 SFTA3P0C7M3 94 aa3.54□□□□□ -1.84
VAPA-207ENST00000583879 SMIM18P0DKX4 95 aa3.54□□□□□ -1.84
VAPA-207ENST00000583879 S100A11P31949 105 aa3.54□□□□□ -1.84
VAPA-207ENST00000583879 TMEM97Q5BJF2 176 aa3.54□□□□□ -1.84
VAPA-207ENST00000583879 OR10J3Q5JRS4 329 aa3.54□□□□□ -1.84
VAPA-207ENST00000583879 C9orf47Q6ZRZ4 202 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms