RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 FAM240BA0A1B0GVZ2 78 aa10.57□□□□□ -0.72
SREBF1-221ENST00000583080 RBFOX3A6NFN3 312 aa10.57□□□□□ -0.72
SREBF1-221ENST00000583080 RNASE3P12724 160 aaKnown RBP10.57□□□□□ -0.72
SREBF1-221ENST00000583080 FAM74A1Q5RGS3 127 aa10.57□□□□□ -0.72
SREBF1-221ENST00000583080 SMIM3Q9BZL3 60 aa10.57□□□□□ -0.72
SREBF1-221ENST00000583080 PARLQ9H300 379 aa10.56□□□□□ -0.72
SREBF1-221ENST00000583080 HSPB11Q9Y547 144 aa10.56□□□□□ -0.72
SREBF1-221ENST00000583080 GGTLC3B5MD39 225 aa10.55□□□□□ -0.72
SREBF1-221ENST00000583080 HMGB3O15347 200 aaKnown RBP10.55□□□□□ -0.72
SREBF1-221ENST00000583080 GCGP01275 180 aa10.55□□□□□ -0.72
SREBF1-221ENST00000583080 RAB2AP61019 212 aa10.55□□□□□ -0.72
SREBF1-221ENST00000583080 TOR2AQ5JU69 321 aa10.55□□□□□ -0.72
SREBF1-221ENST00000583080 ARL6IP6Q8N6S5 226 aa10.55□□□□□ -0.72
SREBF1-221ENST00000583080 NDFIP1Q9BT67 221 aa10.55□□□□□ -0.72
SREBF1-221ENST00000583080 RNF222A6NCQ9 220 aa10.54□□□□□ -0.72
SREBF1-221ENST00000583080 PQLC2Q6ZP29 291 aa10.54□□□□□ -0.72
SREBF1-221ENST00000583080 PTH2Q96A98 100 aa10.54□□□□□ -0.72
SREBF1-221ENST00000583080 SAMD10Q9BYL1 202 aa10.54□□□□□ -0.72
SREBF1-221ENST00000583080 IGKV2D-24A0A075B6R9 120 aa10.53□□□□□ -0.72
SREBF1-221ENST00000583080 TAAR5O14804 337 aa10.53□□□□□ -0.72
SREBF1-221ENST00000583080 HNRNPA3P51991 378 aaKnown RBP10.53□□□□□ -0.72
SREBF1-221ENST00000583080 ASAH1Q13510 395 aa10.53□□□□□ -0.72
SREBF1-221ENST00000583080 C14orf178Q8N769 122 aaPredicted RBP10.53□□□□□ -0.72
SREBF1-221ENST00000583080 CYB561D1Q8N8Q1 229 aa10.53□□□□□ -0.72
SREBF1-221ENST00000583080 Q8N976 141 aa10.53□□□□□ -0.72
SREBF1-221ENST00000583080 OR2T35Q8NGX2 323 aa10.53□□□□□ -0.72
SREBF1-221ENST00000583080 SCGB1C1Q8TD33 95 aa10.53□□□□□ -0.72
SREBF1-221ENST00000583080 PPP1R1CQ8WVI7 109 aa10.53□□□□□ -0.72
SREBF1-221ENST00000583080 CCDC32Q9BV29 185 aa10.53□□□□□ -0.72
SREBF1-221ENST00000583080 JPT2Q9H910 190 aa10.53□□□□□ -0.72
SREBF1-221ENST00000583080 WFDC1Q9HC57 220 aa10.53□□□□□ -0.72
SREBF1-221ENST00000583080 COX11Q9Y6N1 276 aa10.53□□□□□ -0.72
SREBF1-221ENST00000583080 IGLV2-11P01706 119 aa10.52□□□□□ -0.73
SREBF1-221ENST00000583080 IGLV2-8P01709 118 aa10.52□□□□□ -0.73
SREBF1-221ENST00000583080 TCRAP04437 139 aa10.52□□□□□ -0.73
SREBF1-221ENST00000583080 H2BFSP57053 126 aa10.52□□□□□ -0.73
SREBF1-221ENST00000583080 RGS21Q2M5E4 152 aa10.52□□□□□ -0.73
SREBF1-221ENST00000583080 RMI2Q96E14 147 aa10.52□□□□□ -0.73
SREBF1-221ENST00000583080 LINC00479Q96M42 142 aa10.52□□□□□ -0.73
SREBF1-221ENST00000583080 PSG8Q9UQ74 426 aa10.52□□□□□ -0.73
SREBF1-221ENST00000583080 A0A1W2PPV4 95 aa10.51□□□□□ -0.73
SREBF1-221ENST00000583080 ARL14EPLP0DKL9 152 aa10.51□□□□□ -0.73
SREBF1-221ENST00000583080 ACOT6Q3I5F7 207 aaPredicted RBP10.51□□□□□ -0.73
SREBF1-221ENST00000583080 UFSP1Q6NVU6 142 aa10.51□□□□□ -0.73
SREBF1-221ENST00000583080 ZFP2Q6ZN57 461 aa10.51□□□□□ -0.73
SREBF1-221ENST00000583080 NIT1Q86X76 327 aa10.51□□□□□ -0.73
SREBF1-221ENST00000583080 KLK12Q9UKR0 248 aa10.51□□□□□ -0.73
SREBF1-221ENST00000583080 A0A087WWC5 75 aa10.5□□□□□ -0.73
SREBF1-221ENST00000583080 A8MWV9 139 aa10.5□□□□□ -0.73
SREBF1-221ENST00000583080 LGALSLQ3ZCW2 172 aaPredicted RBP10.5□□□□□ -0.73
SREBF1-221ENST00000583080 MZT2BQ6NZ67 158 aa10.5□□□□□ -0.73
SREBF1-221ENST00000583080 PRNTQ86SH4 94 aa10.5□□□□□ -0.73
SREBF1-221ENST00000583080 C5orf17Q8NAS9 161 aa10.5□□□□□ -0.73
SREBF1-221ENST00000583080 SH3BGRL3Q9H299 93 aa10.5□□□□□ -0.73
SREBF1-221ENST00000583080 IGKV3D-20A0A0C4DH25 116 aa10.49□□□□□ -0.73
SREBF1-221ENST00000583080 SERTM2A0A1B0GWG4 89 aa10.49□□□□□ -0.73
SREBF1-221ENST00000583080 MPC2O95563 127 aa10.49□□□□□ -0.73
SREBF1-221ENST00000583080 RPL12P30050 165 aaKnown RBP10.49□□□□□ -0.73
SREBF1-221ENST00000583080 RPL37AP61513 92 aaKnown RBP10.49□□□□□ -0.73
SREBF1-221ENST00000583080 CYCSP99999 105 aaKnown RBP10.49□□□□□ -0.73
SREBF1-221ENST00000583080 FLI1Q01543 452 aaPredicted RBP10.49□□□□□ -0.73
SREBF1-221ENST00000583080 ZFP69Q49AA0 526 aa10.49□□□□□ -0.73
SREBF1-221ENST00000583080 SMUG1Q53HV7 270 aa10.49□□□□□ -0.73
SREBF1-221ENST00000583080 UBE2WQ96B02 151 aa10.49□□□□□ -0.73
SREBF1-221ENST00000583080 URGCP-MRPS24S4R325 110 aa10.49□□□□□ -0.73
SREBF1-221ENST00000583080 OR10G9Q8NGN4 311 aa10.48□□□□□ -0.73
SREBF1-221ENST00000583080 OR10G7Q8NGN6 311 aa10.48□□□□□ -0.73
SREBF1-221ENST00000583080 ENKURQ8TC29 256 aa10.48□□□□□ -0.73
SREBF1-221ENST00000583080 DAZAP1Q96EP5 407 aaKnown RBP10.48□□□□□ -0.73
SREBF1-221ENST00000583080 CDC34P49427 236 aaPredicted RBP10.47□□□□□ -0.73
SREBF1-221ENST00000583080 ATRAIDQ6UW56 229 aa10.47□□□□□ -0.73
SREBF1-221ENST00000583080 A0A1B0GVG6 124 aa10.46□□□□□ -0.73
SREBF1-221ENST00000583080 H3BVH4 76 aa10.46□□□□□ -0.73
SREBF1-221ENST00000583080 K7EQM0 130 aa10.46□□□□□ -0.73
SREBF1-221ENST00000583080 STAG3L2P0CL84 134 aa10.46□□□□□ -0.73
SREBF1-221ENST00000583080 STAG3L3P0CL85 134 aa10.46□□□□□ -0.73
SREBF1-221ENST00000583080 S100A4P26447 101 aaKnown RBP10.46□□□□□ -0.73
SREBF1-221ENST00000583080 GCHFRP30047 84 aa10.46□□□□□ -0.73
SREBF1-221ENST00000583080 ASIPP42127 132 aa10.46□□□□□ -0.73
SREBF1-221ENST00000583080 FGF8P55075 233 aaPredicted RBP10.46□□□□□ -0.73
SREBF1-221ENST00000583080 PIK3CD-AS1Q5SR53 167 aa10.46□□□□□ -0.73
SREBF1-221ENST00000583080 PET100P0DJ07 73 aa10.45□□□□□ -0.74
SREBF1-221ENST00000583080 SUMO1P63165 101 aaKnown RBP10.45□□□□□ -0.74
SREBF1-221ENST00000583080 FAM74A4Q5TZK3 123 aa10.45□□□□□ -0.74
SREBF1-221ENST00000583080 DMRTA1Q5VZB9 504 aa10.45□□□□□ -0.74
SREBF1-221ENST00000583080 SUN5Q8TC36 379 aa10.45□□□□□ -0.74
SREBF1-221ENST00000583080 EPDR1Q9UM22 224 aa10.45□□□□□ -0.74
SREBF1-221ENST00000583080 A0A087WX48 190 aa10.44□□□□□ -0.74
SREBF1-221ENST00000583080 TRAV34A0A0B4J273 112 aa10.44□□□□□ -0.74
SREBF1-221ENST00000583080 SEC11BP0C7V7 166 aa10.44□□□□□ -0.74
SREBF1-221ENST00000583080 MT1HL1P0DM35 61 aa10.44□□□□□ -0.74
SREBF1-221ENST00000583080 RAB24Q969Q5 203 aa10.44□□□□□ -0.74
SREBF1-221ENST00000583080 IL36BQ9NZH7 164 aa10.44□□□□□ -0.74
SREBF1-221ENST00000583080 ARL2-SNX15V9GYD0 113 aa10.44□□□□□ -0.74
SREBF1-221ENST00000583080 A0A087WWL8 130 aa10.43□□□□□ -0.74
SREBF1-221ENST00000583080 INMT-MINDY4F8WBC2 141 aa10.43□□□□□ -0.74
SREBF1-221ENST00000583080 RHODO00212 210 aa10.43□□□□□ -0.74
SREBF1-221ENST00000583080 OR2G3Q8NGZ4 309 aa10.43□□□□□ -0.74
SREBF1-221ENST00000583080 CHCHD7Q9BUK0 85 aa10.43□□□□□ -0.74
SREBF1-221ENST00000583080 PTTG1O95997 202 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms