RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 TRBV6-1A0A0K0K1D8 114 aa13.35□□□□□ -0.27
SREBF1-220ENST00000581707 B4DEV8 164 aa13.35□□□□□ -0.27
SREBF1-220ENST00000581707 H2AFB1P0C5Y9 115 aa13.35□□□□□ -0.27
SREBF1-220ENST00000581707 CRIP1P50238 77 aa13.35□□□□□ -0.27
SREBF1-220ENST00000581707 LOC100131303A0A0U1RQF7 123 aa13.34□□□□□ -0.27
SREBF1-220ENST00000581707 BTF3P20290 206 aaKnown RBP13.34□□□□□ -0.27
SREBF1-220ENST00000581707 ASIPP42127 132 aa13.34□□□□□ -0.27
SREBF1-220ENST00000581707 AKR1C3P42330 323 aa13.34□□□□□ -0.27
SREBF1-220ENST00000581707 FAM162BQ5T6X4 162 aa13.34□□□□□ -0.27
SREBF1-220ENST00000581707 IGHV3-73A0A0B4J1V6 119 aa13.33□□□□□ -0.28
SREBF1-220ENST00000581707 SH2D1AO60880 128 aa13.33□□□□□ -0.28
SREBF1-220ENST00000581707 LTAP01374 205 aa13.33□□□□□ -0.28
SREBF1-220ENST00000581707 LGALSLQ3ZCW2 172 aaPredicted RBP13.33□□□□□ -0.28
SREBF1-220ENST00000581707 SH2D6Q7Z4S9 175 aa13.33□□□□□ -0.28
SREBF1-220ENST00000581707 TCTE3Q8IZS6 198 aa13.33□□□□□ -0.28
SREBF1-220ENST00000581707 SLC25A29Q8N8R3 303 aa13.33□□□□□ -0.28
SREBF1-220ENST00000581707 KRBOX1C9JBD0 128 aa13.32□□□□□ -0.28
SREBF1-220ENST00000581707 M0R036 132 aa13.32□□□□□ -0.28
SREBF1-220ENST00000581707 NHLRC2Q8NBF2 726 aa13.32□□□□□ -0.28
SREBF1-220ENST00000581707 PRADC1Q9BSG0 188 aa13.32□□□□□ -0.28
SREBF1-220ENST00000581707 IL36BQ9NZH7 164 aa13.32□□□□□ -0.28
SREBF1-220ENST00000581707 TRBV6-4A0A1B0GX49 114 aa13.31□□□□□ -0.28
SREBF1-220ENST00000581707 S100A9P06702 114 aaKnown RBP13.31□□□□□ -0.28
SREBF1-220ENST00000581707 ZNF674Q2M3X9 581 aa13.31□□□□□ -0.28
SREBF1-220ENST00000581707 PIK3CD-AS1Q5SR53 167 aa13.31□□□□□ -0.28
SREBF1-220ENST00000581707 SCO2A0A1W2PP80 73 aa13.3□□□□□ -0.28
SREBF1-220ENST00000581707 A8MWV9 139 aa13.3□□□□□ -0.28
SREBF1-220ENST00000581707 H3BVH4 76 aa13.3□□□□□ -0.28
SREBF1-220ENST00000581707 LINC00315P59091 139 aa13.3□□□□□ -0.28
SREBF1-220ENST00000581707 RHOHQ15669 191 aa13.3□□□□□ -0.28
SREBF1-220ENST00000581707 DNLZQ5SXM8 178 aa13.3□□□□□ -0.28
SREBF1-220ENST00000581707 EIF5AL1Q6IS14 154 aaKnown RBP13.3□□□□□ -0.28
SREBF1-220ENST00000581707 Q6ZNX1 250 aa13.3□□□□□ -0.28
SREBF1-220ENST00000581707 TRAV9-2A0A087WT02 112 aa13.29□□□□□ -0.28
SREBF1-220ENST00000581707 GRIFINA4D1Z8 144 aa13.29□□□□□ -0.28
SREBF1-220ENST00000581707 MED14OSP0DP75 135 aa13.29□□□□□ -0.28
SREBF1-220ENST00000581707 MGST1P10620 155 aaKnown RBP13.29□□□□□ -0.28
SREBF1-220ENST00000581707 RAB5CP51148 216 aa13.29□□□□□ -0.28
SREBF1-220ENST00000581707 ZNF575Q86XF7 245 aa13.29□□□□□ -0.28
SREBF1-220ENST00000581707 PARLQ9H300 379 aa13.29□□□□□ -0.28
SREBF1-220ENST00000581707 LY96Q9Y6Y9 160 aa13.29□□□□□ -0.28
SREBF1-220ENST00000581707 ARMS2P0C7Q2 107 aa13.28□□□□□ -0.28
SREBF1-220ENST00000581707 TIRAPP58753 221 aa13.28□□□□□ -0.28
SREBF1-220ENST00000581707 DMRTA1Q5VZB9 504 aa13.28□□□□□ -0.28
SREBF1-220ENST00000581707 ZFP2Q6ZN57 461 aa13.28□□□□□ -0.28
SREBF1-220ENST00000581707 WFDC10BQ8IUB3 73 aa13.28□□□□□ -0.28
SREBF1-220ENST00000581707 TMSB15BA0A087X1C1 80 aa13.27□□□□□ -0.29
SREBF1-220ENST00000581707 TRAV1-1A0A0B4J248 108 aa13.27□□□□□ -0.29
SREBF1-220ENST00000581707 C1QBP02746 253 aa13.27□□□□□ -0.29
SREBF1-220ENST00000581707 CCL20P78556 96 aa13.27□□□□□ -0.29
SREBF1-220ENST00000581707 LINC01559Q495D7 138 aa13.27□□□□□ -0.29
SREBF1-220ENST00000581707 BAGE2Q86Y30 109 aa13.27□□□□□ -0.29
SREBF1-220ENST00000581707 SYT8Q8NBV8 401 aa13.27□□□□□ -0.29
SREBF1-220ENST00000581707 MANBALQ9NQG1 85 aa13.27□□□□□ -0.29
SREBF1-220ENST00000581707 GNG13Q9P2W3 67 aa13.27□□□□□ -0.29
SREBF1-220ENST00000581707 DNAH11Q96DT5 4516 aa13.27□□□□□ -0.29
SREBF1-220ENST00000581707 KIAA1109Q2LD37 5005 aa13.26□□□□□ -0.29
SREBF1-220ENST00000581707 EVI2AP22794 236 aa13.26□□□□□ -0.29
SREBF1-220ENST00000581707 Q6ZSN1 163 aa13.26□□□□□ -0.29
SREBF1-220ENST00000581707 JPT2Q9H910 190 aa13.26□□□□□ -0.29
SREBF1-220ENST00000581707 PHLDA3Q9Y5J5 127 aa13.26□□□□□ -0.29
SREBF1-220ENST00000581707 TEX46H3BTG2 121 aa13.25□□□□□ -0.29
SREBF1-220ENST00000581707 K7EP13 123 aa13.25□□□□□ -0.29
SREBF1-220ENST00000581707 DNAH10OSP0CZ25 163 aa13.25□□□□□ -0.29
SREBF1-220ENST00000581707 SULT1A2P50226 295 aa13.25□□□□□ -0.29
SREBF1-220ENST00000581707 Q6ZRN7 208 aaPredicted RBP13.25□□□□□ -0.29
SREBF1-220ENST00000581707 MLST8Q9BVC4 326 aa13.25□□□□□ -0.29
SREBF1-220ENST00000581707 TNFRSF18Q9Y5U5 241 aa13.25□□□□□ -0.29
SREBF1-220ENST00000581707 C16orf90A8MZG2 172 aa13.24□□□□□ -0.29
SREBF1-220ENST00000581707 SLC51BQ86UW2 128 aa13.24□□□□□ -0.29
SREBF1-220ENST00000581707 SAMD10Q9BYL1 202 aa13.24□□□□□ -0.29
SREBF1-220ENST00000581707 SCRT2Q9NQ03 307 aa13.24□□□□□ -0.29
SREBF1-220ENST00000581707 HERC2O95714 4834 aa13.23□□□□□ -0.29
SREBF1-220ENST00000581707 UFSP1Q6NVU6 142 aa13.23□□□□□ -0.29
SREBF1-220ENST00000581707 SPATA12Q7Z6I5 190 aa13.23□□□□□ -0.29
SREBF1-220ENST00000581707 NFE4Q86UQ8 179 aa13.23□□□□□ -0.29
SREBF1-220ENST00000581707 ATP6V0E2Q8NHE4 81 aa13.23□□□□□ -0.29
SREBF1-220ENST00000581707 DYNC1H1Q14204 4646 aaKnown RBP13.23□□□□□ -0.29
SREBF1-220ENST00000581707 TRAV8-6A0A0B4J262 113 aa13.22□□□□□ -0.29
SREBF1-220ENST00000581707 IGHV3-38A0A0C4DH36 116 aa13.22□□□□□ -0.29
SREBF1-220ENST00000581707 M0R381 172 aa13.22□□□□□ -0.29
SREBF1-220ENST00000581707 RPL35P42766 123 aaKnown RBP13.22□□□□□ -0.29
SREBF1-220ENST00000581707 AKAP14Q86UN6 197 aa13.22□□□□□ -0.29
SREBF1-220ENST00000581707 C11orf52Q96A22 123 aa13.22□□□□□ -0.29
SREBF1-220ENST00000581707 MSRB1Q9NZV6 116 aa13.22□□□□□ -0.29
SREBF1-220ENST00000581707 hCG_2014768A0A024R1R8 64 aa13.21□□□□□ -0.29
SREBF1-220ENST00000581707 RHODO00212 210 aa13.21□□□□□ -0.29
SREBF1-220ENST00000581707 CRYGDP07320 174 aa13.21□□□□□ -0.29
SREBF1-220ENST00000581707 OR10J3Q5JRS4 329 aa13.21□□□□□ -0.29
SREBF1-220ENST00000581707 ZFP82Q8N141 532 aa13.21□□□□□ -0.29
SREBF1-220ENST00000581707 SFRP2Q96HF1 295 aa13.21□□□□□ -0.29
SREBF1-220ENST00000581707 GTSF1LQ9H1H1 148 aa13.21□□□□□ -0.29
SREBF1-220ENST00000581707 GAGE12JA6NER3 117 aa13.2□□□□□ -0.3
SREBF1-220ENST00000581707 RPL19P84098 196 aaKnown RBP13.2□□□□□ -0.3
SREBF1-220ENST00000581707 GAGE1Q13065 139 aa13.2□□□□□ -0.3
SREBF1-220ENST00000581707 GAGE4Q13068 117 aa13.2□□□□□ -0.3
SREBF1-220ENST00000581707 GAGE5Q13069 117 aa13.2□□□□□ -0.3
SREBF1-220ENST00000581707 GAGE13Q4V321 117 aa13.2□□□□□ -0.3
SREBF1-220ENST00000581707 LELP1Q5T871 98 aa13.2□□□□□ -0.3
SREBF1-220ENST00000581707 FAM74A4Q5TZK3 123 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms