RNA–Protein interactions for RNA: ENST00000580958.5

SS18-217, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 775 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-217ENST00000580958 RBMY1CP0DJD4 496 aa7.73□□□□□ -1.17
SS18-217ENST00000580958 MED14OSP0DP75 135 aa7.73□□□□□ -1.17
SS18-217ENST00000580958 RBMY1FQ15415 496 aaKnown RBP7.73□□□□□ -1.17
SS18-217ENST00000580958 PDZD11Q5EBL8 140 aa7.73□□□□□ -1.17
SS18-217ENST00000580958 TRPT1Q86TN4 253 aaKnown RBP7.73□□□□□ -1.17
SS18-217ENST00000580958 HIST3H2BBQ8N257 126 aa7.73□□□□□ -1.17
SS18-217ENST00000580958 CLUHP3Q96NS8 147 aa7.73□□□□□ -1.17
SS18-217ENST00000580958 ALKBH7Q9BT30 221 aaPredicted RBP7.73□□□□□ -1.17
SS18-217ENST00000580958 ZNF747Q9BV97 191 aa7.73□□□□□ -1.17
SS18-217ENST00000580958 C19orf73Q9NVV2 129 aa7.73□□□□□ -1.17
SS18-217ENST00000580958 TP53TG3Q9ULZ0 132 aa7.73□□□□□ -1.17
SS18-217ENST00000580958 TRRAPQ9Y4A5 3859 aa7.72□□□□□ -1.17
SS18-217ENST00000580958 IFITM10A6NMD0 228 aa7.72□□□□□ -1.17
SS18-217ENST00000580958 RNASE3P12724 160 aaKnown RBP7.72□□□□□ -1.17
SS18-217ENST00000580958 AKR1D1P51857 326 aa7.72□□□□□ -1.17
SS18-217ENST00000580958 Q0VG73 95 aa7.72□□□□□ -1.17
SS18-217ENST00000580958 IQCJQ1A5X6 159 aa7.72□□□□□ -1.17
SS18-217ENST00000580958 TDRG1Q3Y452 100 aa7.72□□□□□ -1.17
SS18-217ENST00000580958 SPANXN1Q5VSR9 72 aa7.72□□□□□ -1.17
SS18-217ENST00000580958 FAM104BQ5XKR9 115 aa7.72□□□□□ -1.17
SS18-217ENST00000580958 BAGE3Q86Y29 109 aa7.72□□□□□ -1.17
SS18-217ENST00000580958 AMN1Q8IY45 258 aa7.72□□□□□ -1.17
SS18-217ENST00000580958 TMEM256Q8N2U0 113 aa7.72□□□□□ -1.17
SS18-217ENST00000580958 SCRT2Q9NQ03 307 aa7.72□□□□□ -1.17
SS18-217ENST00000580958 IGHV4-4A0A075B6R2 117 aa7.71□□□□□ -1.18
SS18-217ENST00000580958 IGHV3-16A0A0C4DH30 117 aa7.71□□□□□ -1.18
SS18-217ENST00000580958 NUPR1O60356 82 aa7.71□□□□□ -1.18
SS18-217ENST00000580958 INSP01308 110 aa7.71□□□□□ -1.18
SS18-217ENST00000580958 INSL3P51460 131 aa7.71□□□□□ -1.18
SS18-217ENST00000580958 LINC00310P59036 64 aa7.71□□□□□ -1.18
SS18-217ENST00000580958 MRPL51Q4U2R6 128 aaKnown RBP7.71□□□□□ -1.18
SS18-217ENST00000580958 OR10J3Q5JRS4 329 aa7.71□□□□□ -1.18
SS18-217ENST00000580958 C18orf32Q8TCD1 76 aa7.71□□□□□ -1.18
SS18-217ENST00000580958 FAM110AQ9BQ89 295 aa7.71□□□□□ -1.18
SS18-217ENST00000580958 TMEM191AQ9H0A3 160 aa7.71□□□□□ -1.18
SS18-217ENST00000580958 PHLDA3Q9Y5J5 127 aa7.71□□□□□ -1.18
SS18-217ENST00000580958 TRGV11A0A075B6L2 103 aa7.7□□□□□ -1.18
SS18-217ENST00000580958 M0R381 172 aa7.7□□□□□ -1.18
SS18-217ENST00000580958 SERF1AO75920 110 aa7.7□□□□□ -1.18
SS18-217ENST00000580958 AMBPP02760 352 aa7.7□□□□□ -1.18
SS18-217ENST00000580958 RPL35AP18077 110 aaKnown RBP7.7□□□□□ -1.18
SS18-217ENST00000580958 S100A2P29034 98 aa7.7□□□□□ -1.18
SS18-217ENST00000580958 C12orf54Q6X4T0 127 aa7.7□□□□□ -1.18
SS18-217ENST00000580958 SMIM15Q7Z3B0 74 aa7.7□□□□□ -1.18
SS18-217ENST00000580958 Q8N1Y9 231 aa7.7□□□□□ -1.18
SS18-217ENST00000580958 C3orf56Q8N813 242 aa7.7□□□□□ -1.18
SS18-217ENST00000580958 RNF185Q96GF1 192 aa7.7□□□□□ -1.18
SS18-217ENST00000580958 C9orf85Q96MD7 179 aa7.7□□□□□ -1.18
SS18-217ENST00000580958 MDFICQ9P1T7 246 aa7.7□□□□□ -1.18
SS18-217ENST00000580958 XCL2Q9UBD3 114 aa7.7□□□□□ -1.18
SS18-217ENST00000580958 DNAH3Q8TD57 4116 aa7.7□□□□□ -1.18
SS18-217ENST00000580958 NACAE9PAV3 2078 aa7.69□□□□□ -1.18
SS18-217ENST00000580958 CBY3A6NI87 242 aa7.69□□□□□ -1.18
SS18-217ENST00000580958 SMKR1H3BMG3 65 aa7.69□□□□□ -1.18
SS18-217ENST00000580958 NXPH4O95158 308 aa7.69□□□□□ -1.18
SS18-217ENST00000580958 IGLL1P15814 213 aa7.69□□□□□ -1.18
SS18-217ENST00000580958 RAB4AP20338 218 aa7.69□□□□□ -1.18
SS18-217ENST00000580958 EVI2AP22794 236 aa7.69□□□□□ -1.18
SS18-217ENST00000580958 DEFB125Q8N687 156 aa7.69□□□□□ -1.18
SS18-217ENST00000580958 WFDC9Q8NEX5 89 aa7.69□□□□□ -1.18
SS18-217ENST00000580958 RCHY1Q96PM5 261 aa7.69□□□□□ -1.18
SS18-217ENST00000580958 LINC01587Q99440 93 aa7.69□□□□□ -1.18
SS18-217ENST00000580958 C20orf144Q9BQM9 153 aa7.69□□□□□ -1.18
SS18-217ENST00000580958 MCRIP2Q9BUT9 160 aaKnown RBP7.69□□□□□ -1.18
SS18-217ENST00000580958 KRTAP4-8Q9BYQ9 185 aa7.69□□□□□ -1.18
SS18-217ENST00000580958 STAB1Q9NY15 2570 aa7.69□□□□□ -1.18
SS18-217ENST00000580958 D6R8Y8 96 aa7.68□□□□□ -1.18
SS18-217ENST00000580958 NCR2O95944 276 aa7.68□□□□□ -1.18
SS18-217ENST00000580958 PRM2P04554 102 aa7.68□□□□□ -1.18
SS18-217ENST00000580958 FABP4P15090 132 aa7.68□□□□□ -1.18
SS18-217ENST00000580958 HTN1P15515 57 aa7.68□□□□□ -1.18
SS18-217ENST00000580958 PRELID3AQ96N28 172 aa7.68□□□□□ -1.18
SS18-217ENST00000580958 HIST1H2BLQ99880 126 aa7.68□□□□□ -1.18
SS18-217ENST00000580958 U3KQK5 164 aa7.68□□□□□ -1.18
SS18-217ENST00000580958 ANK2Q01484 3957 aa7.68□□□□□ -1.18
SS18-217ENST00000580958 ESDP10768 282 aa7.67□□□□□ -1.18
SS18-217ENST00000580958 CKS2P33552 79 aa7.67□□□□□ -1.18
SS18-217ENST00000580958 NUTF2P61970 127 aaKnown RBP7.67□□□□□ -1.18
SS18-217ENST00000580958 RNASEKQ6P5S7 137 aaKnown RBP7.67□□□□□ -1.18
SS18-217ENST00000580958 SHISA2Q6UWI4 295 aa7.67□□□□□ -1.18
SS18-217ENST00000580958 GTSCR1Q86UQ5 136 aa7.67□□□□□ -1.18
SS18-217ENST00000580958 ORMDL3Q8N138 153 aa7.67□□□□□ -1.18
SS18-217ENST00000580958 C1orf158Q8N1D5 194 aa7.67□□□□□ -1.18
SS18-217ENST00000580958 TMEM158Q8WZ71 300 aa7.67□□□□□ -1.18
SS18-217ENST00000580958 LINC00467Q9BRT7 94 aa7.67□□□□□ -1.18
SS18-217ENST00000580958 GAS8-AS1O95177 125 aa7.66□□□□□ -1.18
SS18-217ENST00000580958 GIG44P09565 113 aaPredicted RBP7.66□□□□□ -1.18
SS18-217ENST00000580958 GATA1P15976 413 aaPredicted RBP7.66□□□□□ -1.18
SS18-217ENST00000580958 ZNF415Q09FC8 603 aa7.66□□□□□ -1.18
SS18-217ENST00000580958 MORN3Q6PF18 240 aaPredicted RBP7.66□□□□□ -1.18
SS18-217ENST00000580958 NIT1Q86X76 327 aa7.66□□□□□ -1.18
SS18-217ENST00000580958 C14orf178Q8N769 122 aaPredicted RBP7.66□□□□□ -1.18
SS18-217ENST00000580958 SYT8Q8NBV8 401 aa7.66□□□□□ -1.18
SS18-217ENST00000580958 OR10D4PQ8NGN7 298 aa7.66□□□□□ -1.18
SS18-217ENST00000580958 TMEM18Q96B42 140 aa7.66□□□□□ -1.18
SS18-217ENST00000580958 URB1-AS1Q96HZ7 61 aa7.66□□□□□ -1.18
SS18-217ENST00000580958 AP1S3Q96PC3 154 aa7.66□□□□□ -1.18
SS18-217ENST00000580958 TMEM208Q9BTX3 173 aa7.66□□□□□ -1.18
SS18-217ENST00000580958 DPH3P1Q9H4G8 78 aa7.66□□□□□ -1.18
SS18-217ENST00000580958 FBN1P35555 2871 aaKnown RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms