RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 CBY1Q9Y3M2 126 aa10.21□□□□□ -0.78
CDK5RAP3-219ENST00000580670 CMYA5Q8N3K9 4069 aa10.2□□□□□ -0.78
CDK5RAP3-219ENST00000580670 TRPT1Q86TN4 253 aaKnown RBP10.2□□□□□ -0.78
CDK5RAP3-219ENST00000580670 DEFB125Q8N687 156 aa10.2□□□□□ -0.78
CDK5RAP3-219ENST00000580670 CLUHP3Q96NS8 147 aa10.2□□□□□ -0.78
CDK5RAP3-219ENST00000580670 UQCR10Q9UDW1 63 aa10.2□□□□□ -0.78
CDK5RAP3-219ENST00000580670 PKD1L1Q8TDX9 2849 aa10.2□□□□□ -0.78
CDK5RAP3-219ENST00000580670 TRAV12-2A0A075B6T6 113 aa10.19□□□□□ -0.78
CDK5RAP3-219ENST00000580670 ZNF324O75467 553 aaPredicted RBP10.19□□□□□ -0.78
CDK5RAP3-219ENST00000580670 CA1P00915 261 aaPredicted RBP10.19□□□□□ -0.78
CDK5RAP3-219ENST00000580670 Q6ZQT7 251 aa10.19□□□□□ -0.78
CDK5RAP3-219ENST00000580670 OR2D3Q8NGH3 330 aa10.19□□□□□ -0.78
CDK5RAP3-219ENST00000580670 TRAV21A0A0B4J279 112 aa10.19□□□□□ -0.78
CDK5RAP3-219ENST00000580670 C7orf71A4D174 169 aa10.19□□□□□ -0.78
CDK5RAP3-219ENST00000580670 IGLC3P0DOY3 106 aa10.19□□□□□ -0.78
CDK5RAP3-219ENST00000580670 KRTDAPP60985 99 aa10.19□□□□□ -0.78
CDK5RAP3-219ENST00000580670 Q6AWC8 147 aa10.19□□□□□ -0.78
CDK5RAP3-219ENST00000580670 NIT1Q86X76 327 aa10.19□□□□□ -0.78
CDK5RAP3-219ENST00000580670 TMEM189A5PLL7 270 aa10.18□□□□□ -0.78
CDK5RAP3-219ENST00000580670 ORM1P02763 201 aa10.18□□□□□ -0.78
CDK5RAP3-219ENST00000580670 SPATA45Q537H7 98 aa10.18□□□□□ -0.78
CDK5RAP3-219ENST00000580670 TMSB15BA0A087X1C1 80 aa10.17□□□□□ -0.78
CDK5RAP3-219ENST00000580670 TRAV12-3A0A0B4J271 114 aa10.17□□□□□ -0.78
CDK5RAP3-219ENST00000580670 RPL35AP18077 110 aaKnown RBP10.17□□□□□ -0.78
CDK5RAP3-219ENST00000580670 AMTP48728 403 aa10.17□□□□□ -0.78
CDK5RAP3-219ENST00000580670 EGFEM1PQ0D2K5 195 aa10.17□□□□□ -0.78
CDK5RAP3-219ENST00000580670 CT83Q5H943 113 aa10.17□□□□□ -0.78
CDK5RAP3-219ENST00000580670 Q8N1Y9 231 aa10.17□□□□□ -0.78
CDK5RAP3-219ENST00000580670 C11orf21Q9P2W6 132 aa10.17□□□□□ -0.78
CDK5RAP3-219ENST00000580670 C20orf202A1L168 122 aa10.16□□□□□ -0.78
CDK5RAP3-219ENST00000580670 A8MWL6 223 aa10.16□□□□□ -0.78
CDK5RAP3-219ENST00000580670 G3V4G9 280 aa10.16□□□□□ -0.78
CDK5RAP3-219ENST00000580670 C3orf79P0CE67 100 aa10.16□□□□□ -0.78
CDK5RAP3-219ENST00000580670 KRTAP10-11P60412 298 aa10.16□□□□□ -0.78
CDK5RAP3-219ENST00000580670 TSKUQ8WUA8 353 aa10.16□□□□□ -0.78
CDK5RAP3-219ENST00000580670 RCHY1Q96PM5 261 aa10.16□□□□□ -0.78
CDK5RAP3-219ENST00000580670 CRXO43186 299 aaPredicted RBP10.16□□□□□ -0.78
CDK5RAP3-219ENST00000580670 APCSP02743 223 aa10.16□□□□□ -0.78
CDK5RAP3-219ENST00000580670 SRIP30626 198 aa10.16□□□□□ -0.78
CDK5RAP3-219ENST00000580670 TCL1AP56279 114 aa10.16□□□□□ -0.78
CDK5RAP3-219ENST00000580670 PMCHL1Q16048 86 aa10.16□□□□□ -0.78
CDK5RAP3-219ENST00000580670 LINC01559Q495D7 138 aa10.16□□□□□ -0.78
CDK5RAP3-219ENST00000580670 ORAOV1Q8WV07 137 aa10.16□□□□□ -0.78
CDK5RAP3-219ENST00000580670 MRPS16Q9Y3D3 137 aaKnown RBP10.16□□□□□ -0.78
CDK5RAP3-219ENST00000580670 IGKV3D-20A0A0C4DH25 116 aa10.15□□□□□ -0.78
CDK5RAP3-219ENST00000580670 RPS20P60866 119 aaKnown RBP10.15□□□□□ -0.78
CDK5RAP3-219ENST00000580670 MUC21Q5SSG8 566 aa10.15□□□□□ -0.78
CDK5RAP3-219ENST00000580670 XCL2Q9UBD3 114 aa10.15□□□□□ -0.78
CDK5RAP3-219ENST00000580670 LAMTOR2Q9Y2Q5 125 aa10.15□□□□□ -0.78
CDK5RAP3-219ENST00000580670 KIAA1644Q3SXP7 199 aa10.14□□□□□ -0.79
CDK5RAP3-219ENST00000580670 SAMD5Q5TGI4 173 aa10.14□□□□□ -0.79
CDK5RAP3-219ENST00000580670 INSP01308 110 aa10.14□□□□□ -0.79
CDK5RAP3-219ENST00000580670 BATFQ16520 125 aa10.14□□□□□ -0.79
CDK5RAP3-219ENST00000580670 ANXA2RQ3ZCQ2 193 aa10.14□□□□□ -0.79
CDK5RAP3-219ENST00000580670 DMRTA1Q5VZB9 504 aa10.14□□□□□ -0.79
CDK5RAP3-219ENST00000580670 MORN3Q6PF18 240 aaPredicted RBP10.14□□□□□ -0.79
CDK5RAP3-219ENST00000580670 STPG4Q8N801 248 aa10.14□□□□□ -0.79
CDK5RAP3-219ENST00000580670 C18orf32Q8TCD1 76 aa10.14□□□□□ -0.79
CDK5RAP3-219ENST00000580670 GTSF1Q8WW33 167 aa10.14□□□□□ -0.79
CDK5RAP3-219ENST00000580670 BORCS7Q96B45 105 aa10.14□□□□□ -0.79
CDK5RAP3-219ENST00000580670 GFRA4Q9GZZ7 299 aa10.14□□□□□ -0.79
CDK5RAP3-219ENST00000580670 HIGD1CA8MV81 97 aa10.13□□□□□ -0.79
CDK5RAP3-219ENST00000580670 RBMY1A1P0DJD3 496 aaKnown RBP10.13□□□□□ -0.79
CDK5RAP3-219ENST00000580670 RBMY1CP0DJD4 496 aa10.13□□□□□ -0.79
CDK5RAP3-219ENST00000580670 PMCHP20382 165 aa10.13□□□□□ -0.79
CDK5RAP3-219ENST00000580670 HNRNPA3P51991 378 aaKnown RBP10.13□□□□□ -0.79
CDK5RAP3-219ENST00000580670 RBMY1FQ15415 496 aaKnown RBP10.13□□□□□ -0.79
CDK5RAP3-219ENST00000580670 FAM159AQ6UWV7 190 aa10.13□□□□□ -0.79
CDK5RAP3-219ENST00000580670 Q6ZN92 141 aa10.13□□□□□ -0.79
CDK5RAP3-219ENST00000580670 FAM231BA6NCW3 169 aa10.12□□□□□ -0.79
CDK5RAP3-219ENST00000580670 SPINK4O60575 86 aa10.12□□□□□ -0.79
CDK5RAP3-219ENST00000580670 KRTAP21-3Q3LHN1 58 aa10.12□□□□□ -0.79
CDK5RAP3-219ENST00000580670 MRPL54Q6P161 138 aaKnown RBP10.12□□□□□ -0.79
CDK5RAP3-219ENST00000580670 ZNF575Q86XF7 245 aa10.12□□□□□ -0.79
CDK5RAP3-219ENST00000580670 GIG44P09565 113 aaPredicted RBP10.11□□□□□ -0.79
CDK5RAP3-219ENST00000580670 SLAQ13239 276 aa10.11□□□□□ -0.79
CDK5RAP3-219ENST00000580670 NUP35Q8NFH5 326 aa10.11□□□□□ -0.79
CDK5RAP3-219ENST00000580670 PGLYRP4Q96LB8 373 aa10.11□□□□□ -0.79
CDK5RAP3-219ENST00000580670 TPPP3Q9BW30 176 aa10.11□□□□□ -0.79
CDK5RAP3-219ENST00000580670 IGHV1OR15-1A0A075B7D0 117 aa10.11□□□□□ -0.79
CDK5RAP3-219ENST00000580670 TRAV9-2A0A087WT02 112 aa10.11□□□□□ -0.79
CDK5RAP3-219ENST00000580670 LOC102724200A0A096LPH7 203 aaPredicted RBP10.11□□□□□ -0.79
CDK5RAP3-219ENST00000580670 ATP5L2Q7Z4Y8 100 aa10.11□□□□□ -0.79
CDK5RAP3-219ENST00000580670 C1QTNF4Q9BXJ3 329 aa10.11□□□□□ -0.79
CDK5RAP3-219ENST00000580670 CSTL1Q9H114 145 aa10.11□□□□□ -0.79
CDK5RAP3-219ENST00000580670 GNRH2O43555 120 aa10.1□□□□□ -0.79
CDK5RAP3-219ENST00000580670 IGHV4-30-4P0DP06 118 aa10.1□□□□□ -0.79
CDK5RAP3-219ENST00000580670 FOXA3P55318 350 aaPredicted RBP10.1□□□□□ -0.79
CDK5RAP3-219ENST00000580670 FER1L6-AS1Q8NA97 138 aa10.1□□□□□ -0.79
CDK5RAP3-219ENST00000580670 LINC01587Q99440 93 aa10.1□□□□□ -0.79
CDK5RAP3-219ENST00000580670 ALKBH7Q9BT30 221 aaPredicted RBP10.1□□□□□ -0.79
CDK5RAP3-219ENST00000580670 IGLC6P0CF74 106 aa10.09□□□□□ -0.79
CDK5RAP3-219ENST00000580670 HTN1P15515 57 aa10.09□□□□□ -0.79
CDK5RAP3-219ENST00000580670 ASIPP42127 132 aa10.09□□□□□ -0.79
CDK5RAP3-219ENST00000580670 FAM19A2Q8N3H0 131 aa10.09□□□□□ -0.79
CDK5RAP3-219ENST00000580670 IGHV3OR16-12A0A075B7B8 117 aa10.09□□□□□ -0.79
CDK5RAP3-219ENST00000580670 A0A1B0GXF2 115 aa10.09□□□□□ -0.79
CDK5RAP3-219ENST00000580670 S100A4P26447 101 aaKnown RBP10.09□□□□□ -0.79
CDK5RAP3-219ENST00000580670 LYZL1Q6UWQ5 148 aa10.09□□□□□ -0.79
CDK5RAP3-219ENST00000580670 C1orf158Q8N1D5 194 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 590.4 ms