RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 RRAS2P62070 204 aaPredicted RBP4.78□□□□□ -1.64
SMARCE1-217ENST00000580654 ZNF266Q14584 549 aa4.78□□□□□ -1.64
SMARCE1-217ENST00000580654 SPCS2Q15005 226 aa4.78□□□□□ -1.64
SMARCE1-217ENST00000580654 KCNIP4Q6PIL6 250 aa4.78□□□□□ -1.64
SMARCE1-217ENST00000580654 ZNF546Q86UE3 836 aa4.78□□□□□ -1.64
SMARCE1-217ENST00000580654 SPACA4Q8TDM5 124 aa4.78□□□□□ -1.64
SMARCE1-217ENST00000580654 RAB2BQ8WUD1 216 aa4.78□□□□□ -1.64
SMARCE1-217ENST00000580654 CIB3Q96Q77 187 aaPredicted RBP4.78□□□□□ -1.64
SMARCE1-217ENST00000580654 Q9UF83 564 aa4.78□□□□□ -1.64
SMARCE1-217ENST00000580654 KCNIP3Q9Y2W7 256 aa4.78□□□□□ -1.64
SMARCE1-217ENST00000580654 TRGV11A0A075B6L2 103 aa4.77□□□□□ -1.65
SMARCE1-217ENST00000580654 F5H697 171 aa4.77□□□□□ -1.65
SMARCE1-217ENST00000580654 TEX46H3BTG2 121 aa4.77□□□□□ -1.65
SMARCE1-217ENST00000580654 AGPAT2O15120 278 aa4.77□□□□□ -1.65
SMARCE1-217ENST00000580654 TRIAP1O43715 76 aa4.77□□□□□ -1.65
SMARCE1-217ENST00000580654 COX7A2P2O60397 106 aa4.77□□□□□ -1.65
SMARCE1-217ENST00000580654 MED6O75586 246 aa4.77□□□□□ -1.65
SMARCE1-217ENST00000580654 SRSF9Q13242 221 aaKnown RBP eCLIP4.77□□□□□ -1.65
SMARCE1-217ENST00000580654 TMEM78Q5T7P6 136 aa4.77□□□□□ -1.65
SMARCE1-217ENST00000580654 CFAP126Q5VTH2 177 aa4.77□□□□□ -1.65
SMARCE1-217ENST00000580654 C10orf113Q5VZT2 155 aa4.77□□□□□ -1.65
SMARCE1-217ENST00000580654 Q6AWC8 147 aa4.77□□□□□ -1.65
SMARCE1-217ENST00000580654 REG3GQ6UW15 175 aa4.77□□□□□ -1.65
SMARCE1-217ENST00000580654 SPINK6Q6UWN8 80 aa4.77□□□□□ -1.65
SMARCE1-217ENST00000580654 ENHOQ6UWT2 76 aa4.77□□□□□ -1.65
SMARCE1-217ENST00000580654 PQLC2Q6ZP29 291 aa4.77□□□□□ -1.65
SMARCE1-217ENST00000580654 OR1L4Q8NGR5 311 aa4.77□□□□□ -1.65
SMARCE1-217ENST00000580654 YIPF6Q96EC8 236 aa4.77□□□□□ -1.65
SMARCE1-217ENST00000580654 C2orf50Q96LR7 162 aa4.77□□□□□ -1.65
SMARCE1-217ENST00000580654 NPVFQ9HCQ7 196 aa4.77□□□□□ -1.65
SMARCE1-217ENST00000580654 VCX3AQ9NNX9 186 aa4.77□□□□□ -1.65
SMARCE1-217ENST00000580654 PLAC8Q9NZF1 115 aa4.77□□□□□ -1.65
SMARCE1-217ENST00000580654 CSDC2Q9Y534 153 aaKnown RBP4.77□□□□□ -1.65
SMARCE1-217ENST00000580654 TRBV7-9A0A0J9YWB2 115 aa4.76□□□□□ -1.65
SMARCE1-217ENST00000580654 DUXBA0A1W2PPF3 345 aa4.76□□□□□ -1.65
SMARCE1-217ENST00000580654 GAGE12JA6NER3 117 aa4.76□□□□□ -1.65
SMARCE1-217ENST00000580654 DISC1C4P0D8 188 aa4.76□□□□□ -1.65
SMARCE1-217ENST00000580654 VCYO14598 125 aa4.76□□□□□ -1.65
SMARCE1-217ENST00000580654 GOSR2O14653 212 aa4.76□□□□□ -1.65
SMARCE1-217ENST00000580654 SLC25A6P12236 298 aa4.76□□□□□ -1.65
SMARCE1-217ENST00000580654 ZNF138P52744 262 aa4.76□□□□□ -1.65
SMARCE1-217ENST00000580654 RAB4BP61018 213 aa4.76□□□□□ -1.65
SMARCE1-217ENST00000580654 SUMO2P61956 95 aaKnown RBP4.76□□□□□ -1.65
SMARCE1-217ENST00000580654 HERV-K104P63124 156 aa4.76□□□□□ -1.65
SMARCE1-217ENST00000580654 RPL19P84098 196 aaKnown RBP4.76□□□□□ -1.65
SMARCE1-217ENST00000580654 GAGE1Q13065 139 aa4.76□□□□□ -1.65
SMARCE1-217ENST00000580654 GAGE4Q13068 117 aa4.76□□□□□ -1.65
SMARCE1-217ENST00000580654 GAGE5Q13069 117 aa4.76□□□□□ -1.65
SMARCE1-217ENST00000580654 CYB561D1Q8N8Q1 229 aa4.76□□□□□ -1.65
SMARCE1-217ENST00000580654 RNF185Q96GF1 192 aa4.76□□□□□ -1.65
SMARCE1-217ENST00000580654 SGK494Q96LW2 274 aa4.76□□□□□ -1.65
SMARCE1-217ENST00000580654 MGST2Q99735 147 aa4.76□□□□□ -1.65
SMARCE1-217ENST00000580654 SOSTQ9BQB4 213 aa4.76□□□□□ -1.65
SMARCE1-217ENST00000580654 OR51M1Q9H341 326 aa4.76□□□□□ -1.65
SMARCE1-217ENST00000580654 VAX2Q9UIW0 290 aa4.76□□□□□ -1.65
SMARCE1-217ENST00000580654 MUC21A0A0G2JKD1 596 aa4.75□□□□□ -1.65
SMARCE1-217ENST00000580654 A0A1B0GW15 77 aa4.75□□□□□ -1.65
SMARCE1-217ENST00000580654 FNDC10F2Z333 226 aa4.75□□□□□ -1.65
SMARCE1-217ENST00000580654 HLA-DQA1P01909 254 aa4.75□□□□□ -1.65
SMARCE1-217ENST00000580654 TYMSP04818 313 aa4.75□□□□□ -1.65
SMARCE1-217ENST00000580654 PYYP10082 97 aa4.75□□□□□ -1.65
SMARCE1-217ENST00000580654 INPP1P49441 399 aa4.75□□□□□ -1.65
SMARCE1-217ENST00000580654 AP3S2P59780 193 aa4.75□□□□□ -1.65
SMARCE1-217ENST00000580654 NCS1P62166 190 aa4.75□□□□□ -1.65
SMARCE1-217ENST00000580654 SRPXP78539 464 aa4.75□□□□□ -1.65
SMARCE1-217ENST00000580654 ARL16Q0P5N6 197 aa4.75□□□□□ -1.65
SMARCE1-217ENST00000580654 C5orf47Q569G3 176 aa4.75□□□□□ -1.65
SMARCE1-217ENST00000580654 C7orf33Q8WU49 177 aa4.75□□□□□ -1.65
SMARCE1-217ENST00000580654 C15orf40Q8WUR7 153 aa4.75□□□□□ -1.65
SMARCE1-217ENST00000580654 PSENENQ9NZ42 101 aa4.75□□□□□ -1.65
SMARCE1-217ENST00000580654 ATP6V1G2O95670 118 aa4.74□□□□□ -1.65
SMARCE1-217ENST00000580654 SEC11BP0C7V7 166 aa4.74□□□□□ -1.65
SMARCE1-217ENST00000580654 METTL15P1P0C7V9 234 aa4.74□□□□□ -1.65
SMARCE1-217ENST00000580654 HIST1H1EP10412 219 aaKnown RBP4.74□□□□□ -1.65
SMARCE1-217ENST00000580654 Q0VG73 95 aa4.74□□□□□ -1.65
SMARCE1-217ENST00000580654 RAB31Q13636 194 aa4.74□□□□□ -1.65
SMARCE1-217ENST00000580654 KRTAP26-1Q6PEX3 210 aa4.74□□□□□ -1.65
SMARCE1-217ENST00000580654 TMEM14EPQ6UXP3 125 aa4.74□□□□□ -1.65
SMARCE1-217ENST00000580654 OR10G9Q8NGN4 311 aa4.74□□□□□ -1.65
SMARCE1-217ENST00000580654 AP3S1Q92572 193 aa4.74□□□□□ -1.65
SMARCE1-217ENST00000580654 DPH3Q96FX2 82 aa4.74□□□□□ -1.65
SMARCE1-217ENST00000580654 SCGB3A2Q96PL1 93 aa4.74□□□□□ -1.65
SMARCE1-217ENST00000580654 SAMD10Q9BYL1 202 aa4.74□□□□□ -1.65
SMARCE1-217ENST00000580654 CCDC59Q9P031 241 aaKnown RBP4.74□□□□□ -1.65
SMARCE1-217ENST00000580654 URGCP-MRPS24S4R325 110 aa4.74□□□□□ -1.65
SMARCE1-217ENST00000580654 A0A087WWC5 75 aa4.73□□□□□ -1.65
SMARCE1-217ENST00000580654 A0A087WXM4 84 aa4.73□□□□□ -1.65
SMARCE1-217ENST00000580654 RGS5O15539 181 aa4.73□□□□□ -1.65
SMARCE1-217ENST00000580654 MBPP02686 304 aaPredicted RBP4.73□□□□□ -1.65
SMARCE1-217ENST00000580654 AKAIN1P0CW23 69 aa4.73□□□□□ -1.65
SMARCE1-217ENST00000580654 MGST1P10620 155 aaKnown RBP4.73□□□□□ -1.65
SMARCE1-217ENST00000580654 ANXA3P12429 323 aa4.73□□□□□ -1.65
SMARCE1-217ENST00000580654 CAV2P51636 162 aa4.73□□□□□ -1.65
SMARCE1-217ENST00000580654 CNBPP62633 177 aaKnown RBP4.73□□□□□ -1.65
SMARCE1-217ENST00000580654 PDE6HQ13956 83 aa4.73□□□□□ -1.65
SMARCE1-217ENST00000580654 ZNF876PQ49A33 203 aa4.73□□□□□ -1.65
SMARCE1-217ENST00000580654 MIC13Q5XKP0 118 aa4.73□□□□□ -1.65
SMARCE1-217ENST00000580654 SLC51BQ86UW2 128 aa4.73□□□□□ -1.65
SMARCE1-217ENST00000580654 GTSF1Q8WW33 167 aa4.73□□□□□ -1.65
SMARCE1-217ENST00000580654 PRRT1Q99946 306 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms