RNA–Protein interactions for RNA: ENST00000580533.1

SNORD3C-201, Transcript of small nucleolar RNA, C/D box 3C, humanhuman

BASIC

Gene SNORD3C, Length 581 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3C-201ENST00000580533 LINC01559Q495D7 138 aa8.53□□□□□ -1.04
SNORD3C-201ENST00000580533 FAM231DQ6ZW35 169 aa8.53□□□□□ -1.04
SNORD3C-201ENST00000580533 S100A4P26447 101 aaKnown RBP8.52□□□□□ -1.05
SNORD3C-201ENST00000580533 ASIPP42127 132 aa8.52□□□□□ -1.05
SNORD3C-201ENST00000580533 ZNF80P51504 273 aaPredicted RBP8.52□□□□□ -1.05
SNORD3C-201ENST00000580533 KIR3DS1Q14943 382 aa8.52□□□□□ -1.05
SNORD3C-201ENST00000580533 IBA57Q5T440 356 aaKnown RBP8.52□□□□□ -1.05
SNORD3C-201ENST00000580533 C11orf68Q9H3H3 251 aaKnown RBP8.52□□□□□ -1.05
SNORD3C-201ENST00000580533 SMIM27A0A1W2PRY6 76 aa8.51□□□□□ -1.05
SNORD3C-201ENST00000580533 MT-ND6P03923 174 aa8.51□□□□□ -1.05
SNORD3C-201ENST00000580533 FABP4P15090 132 aa8.51□□□□□ -1.05
SNORD3C-201ENST00000580533 CTAG1AP78358 180 aa8.51□□□□□ -1.05
SNORD3C-201ENST00000580533 MUC21Q5SSG8 566 aa8.51□□□□□ -1.05
SNORD3C-201ENST00000580533 PACRGQ96M98 296 aaPredicted RBP8.51□□□□□ -1.05
SNORD3C-201ENST00000580533 GNB1LQ9BYB4 327 aa8.51□□□□□ -1.05
SNORD3C-201ENST00000580533 X6R8D5 127 aa8.51□□□□□ -1.05
SNORD3C-201ENST00000580533 C19orf71A6NCJ1 209 aa8.5□□□□□ -1.05
SNORD3C-201ENST00000580533 ZNF705GA8MUZ8 300 aaPredicted RBP8.5□□□□□ -1.05
SNORD3C-201ENST00000580533 GATCO43716 136 aaKnown RBP8.5□□□□□ -1.05
SNORD3C-201ENST00000580533 RBMY1A1P0DJD3 496 aaKnown RBP8.5□□□□□ -1.05
SNORD3C-201ENST00000580533 RBMY1CP0DJD4 496 aa8.5□□□□□ -1.05
SNORD3C-201ENST00000580533 JOSD1Q15040 202 aaPredicted RBP8.5□□□□□ -1.05
SNORD3C-201ENST00000580533 RBMY1FQ15415 496 aaKnown RBP8.5□□□□□ -1.05
SNORD3C-201ENST00000580533 CT83Q5H943 113 aa8.5□□□□□ -1.05
SNORD3C-201ENST00000580533 WDR73Q6P4I2 378 aa8.5□□□□□ -1.05
SNORD3C-201ENST00000580533 OR2D3Q8NGH3 330 aa8.5□□□□□ -1.05
SNORD3C-201ENST00000580533 SPXQ9BT56 116 aa8.5□□□□□ -1.05
SNORD3C-201ENST00000580533 RPP21Q9H633 154 aaKnown RBP8.5□□□□□ -1.05
SNORD3C-201ENST00000580533 RETNQ9HD89 108 aa8.5□□□□□ -1.05
SNORD3C-201ENST00000580533 TIMM8BQ9Y5J9 83 aaPredicted RBP8.5□□□□□ -1.05
SNORD3C-201ENST00000580533 IGHV4-28A0A0C4DH34 117 aa8.49□□□□□ -1.05
SNORD3C-201ENST00000580533 LYRM9A8MSI8 78 aa8.49□□□□□ -1.05
SNORD3C-201ENST00000580533 A8MWL6 223 aa8.49□□□□□ -1.05
SNORD3C-201ENST00000580533 ESDP10768 282 aa8.49□□□□□ -1.05
SNORD3C-201ENST00000580533 CRIP1P50238 77 aa8.49□□□□□ -1.05
SNORD3C-201ENST00000580533 PDZD11Q5EBL8 140 aa8.49□□□□□ -1.05
SNORD3C-201ENST00000580533 RASL11AQ6T310 242 aa8.49□□□□□ -1.05
SNORD3C-201ENST00000580533 Q8NAQ8 132 aa8.49□□□□□ -1.05
SNORD3C-201ENST00000580533 RNASE8Q8TDE3 154 aaKnown RBP8.49□□□□□ -1.05
SNORD3C-201ENST00000580533 TMEM18Q96B42 140 aa8.49□□□□□ -1.05
SNORD3C-201ENST00000580533 NDUFAF3Q9BU61 184 aa8.49□□□□□ -1.05
SNORD3C-201ENST00000580533 TP53TG3Q9ULZ0 132 aa8.49□□□□□ -1.05
SNORD3C-201ENST00000580533 U3KQK5 164 aa8.49□□□□□ -1.05
SNORD3C-201ENST00000580533 MEGF8Q7Z7M0 2845 aa8.48□□□□□ -1.05
SNORD3C-201ENST00000580533 SPART-AS1P0CW21 52 aa8.48□□□□□ -1.05
SNORD3C-201ENST00000580533 MED14OSP0DP75 135 aa8.48□□□□□ -1.05
SNORD3C-201ENST00000580533 TCL1AP56279 114 aa8.48□□□□□ -1.05
SNORD3C-201ENST00000580533 Q0VG73 95 aa8.48□□□□□ -1.05
SNORD3C-201ENST00000580533 SYT8Q8NBV8 401 aa8.48□□□□□ -1.05
SNORD3C-201ENST00000580533 NUDT10Q8NFP7 164 aa8.48□□□□□ -1.05
SNORD3C-201ENST00000580533 NUDT11Q96G61 164 aa8.48□□□□□ -1.05
SNORD3C-201ENST00000580533 MRPL18Q9H0U6 180 aaKnown RBP8.48□□□□□ -1.05
SNORD3C-201ENST00000580533 RNASE7Q9H1E1 156 aaKnown RBP8.48□□□□□ -1.05
SNORD3C-201ENST00000580533 IGKV3D-20A0A0C4DH25 116 aa8.47□□□□□ -1.05
SNORD3C-201ENST00000580533 IGHV3-16A0A0C4DH30 117 aa8.47□□□□□ -1.05
SNORD3C-201ENST00000580533 FAM231BA6NCW3 169 aa8.47□□□□□ -1.05
SNORD3C-201ENST00000580533 LINC00587B1AMM8 73 aa8.47□□□□□ -1.05
SNORD3C-201ENST00000580533 F2Z2F3 143 aa8.47□□□□□ -1.05
SNORD3C-201ENST00000580533 EMP1P54849 157 aa8.47□□□□□ -1.05
SNORD3C-201ENST00000580533 DAZ2Q13117 558 aaKnown RBP8.47□□□□□ -1.05
SNORD3C-201ENST00000580533 LGALS9BQ3B8N2 356 aa8.47□□□□□ -1.05
SNORD3C-201ENST00000580533 IL17DQ8TAD2 202 aa8.47□□□□□ -1.05
SNORD3C-201ENST00000580533 BORCS7Q96B45 105 aa8.47□□□□□ -1.05
SNORD3C-201ENST00000580533 GFRA4Q9GZZ7 299 aa8.47□□□□□ -1.05
SNORD3C-201ENST00000580533 FBN3Q75N90 2809 aa8.47□□□□□ -1.05
SNORD3C-201ENST00000580533 TMSB15BA0A087X1C1 80 aa8.46□□□□□ -1.06
SNORD3C-201ENST00000580533 GNRH2O43555 120 aa8.46□□□□□ -1.06
SNORD3C-201ENST00000580533 HLA-DQA1P01909 254 aa8.46□□□□□ -1.06
SNORD3C-201ENST00000580533 TMEM136Q6ZRR5 245 aa8.46□□□□□ -1.06
SNORD3C-201ENST00000580533 C11orf21Q9P2W6 132 aa8.46□□□□□ -1.06
SNORD3C-201ENST00000580533 PHLDA3Q9Y5J5 127 aa8.46□□□□□ -1.06
SNORD3C-201ENST00000580533 A0A0J9YWU9 116 aa8.45□□□□□ -1.06
SNORD3C-201ENST00000580533 M0R2P5 195 aa8.45□□□□□ -1.06
SNORD3C-201ENST00000580533 OR5AL1P0C617 328 aa8.45□□□□□ -1.06
SNORD3C-201ENST00000580533 AZU1P20160 251 aa8.45□□□□□ -1.06
SNORD3C-201ENST00000580533 CACNG7P62955 275 aa8.45□□□□□ -1.06
SNORD3C-201ENST00000580533 PIK3CD-AS1Q5SR53 167 aa8.45□□□□□ -1.06
SNORD3C-201ENST00000580533 Q6ZQT7 251 aa8.45□□□□□ -1.06
SNORD3C-201ENST00000580533 FER1L6-AS1Q8NA97 138 aa8.45□□□□□ -1.06
SNORD3C-201ENST00000580533 C11orf72Q8NBR9 251 aa8.45□□□□□ -1.06
SNORD3C-201ENST00000580533 TSKUQ8WUA8 353 aa8.45□□□□□ -1.06
SNORD3C-201ENST00000580533 PTH2Q96A98 100 aa8.45□□□□□ -1.06
SNORD3C-201ENST00000580533 NOP10Q9NPE3 64 aaKnown RBP8.45□□□□□ -1.06
SNORD3C-201ENST00000580533 GRIFINA4D1Z8 144 aa8.44□□□□□ -1.06
SNORD3C-201ENST00000580533 H3BVH4 76 aa8.44□□□□□ -1.06
SNORD3C-201ENST00000580533 ARMS2P0C7Q2 107 aa8.44□□□□□ -1.06
SNORD3C-201ENST00000580533 GZMBP10144 247 aa8.44□□□□□ -1.06
SNORD3C-201ENST00000580533 DAD1P61803 113 aa8.44□□□□□ -1.06
SNORD3C-201ENST00000580533 PKIAP61925 76 aa8.44□□□□□ -1.06
SNORD3C-201ENST00000580533 OR10J3Q5JRS4 329 aa8.44□□□□□ -1.06
SNORD3C-201ENST00000580533 FAM222AQ5U5X8 452 aa8.44□□□□□ -1.06
SNORD3C-201ENST00000580533 ATP5L2Q7Z4Y8 100 aa8.44□□□□□ -1.06
SNORD3C-201ENST00000580533 C11orf45Q8TAV5 145 aa8.44□□□□□ -1.06
SNORD3C-201ENST00000580533 C9orf85Q96MD7 179 aa8.44□□□□□ -1.06
SNORD3C-201ENST00000580533 TPPP3Q9BW30 176 aa8.44□□□□□ -1.06
SNORD3C-201ENST00000580533 MDFICQ9P1T7 246 aa8.44□□□□□ -1.06
SNORD3C-201ENST00000580533 DKK2Q9UBU2 259 aa8.44□□□□□ -1.06
SNORD3C-201ENST00000580533 NAT8BQ9UHF3 227 aa8.44□□□□□ -1.06
SNORD3C-201ENST00000580533 TRGV2A0A075B6R0 118 aa8.43□□□□□ -1.06
SNORD3C-201ENST00000580533 TRGV1A0A0A0MS02 117 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms