RNA–Protein interactions for RNA: ENST00000579238.1

CASC3-206, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-206ENST00000579238 PLA2G2DQ9UNK4 145 aa5.61□□□□□ -1.51
CASC3-206ENST00000579238 HSPB11Q9Y547 144 aa5.61□□□□□ -1.51
CASC3-206ENST00000579238 A0A1W2PPV4 95 aa5.6□□□□□ -1.51
CASC3-206ENST00000579238 RNF222A6NCQ9 220 aa5.6□□□□□ -1.51
CASC3-206ENST00000579238 GAGE12JA6NER3 117 aa5.6□□□□□ -1.51
CASC3-206ENST00000579238 A8MWV9 139 aa5.6□□□□□ -1.51
CASC3-206ENST00000579238 SEC11BP0C7V7 166 aa5.6□□□□□ -1.51
CASC3-206ENST00000579238 RNASE3P12724 160 aaKnown RBP5.6□□□□□ -1.51
CASC3-206ENST00000579238 ZNF80P51504 273 aaPredicted RBP5.6□□□□□ -1.51
CASC3-206ENST00000579238 GAGE1Q13065 139 aa5.6□□□□□ -1.51
CASC3-206ENST00000579238 GAGE4Q13068 117 aa5.6□□□□□ -1.51
CASC3-206ENST00000579238 GAGE5Q13069 117 aa5.6□□□□□ -1.51
CASC3-206ENST00000579238 GAGE13Q4V321 117 aa5.6□□□□□ -1.51
CASC3-206ENST00000579238 MZT2BQ6NZ67 158 aa5.6□□□□□ -1.51
CASC3-206ENST00000579238 ZFP2Q6ZN57 461 aa5.6□□□□□ -1.51
CASC3-206ENST00000579238 CYB561D1Q8N8Q1 229 aa5.6□□□□□ -1.51
CASC3-206ENST00000579238 CIRBP-AS1Q8TBR5 109 aa5.6□□□□□ -1.51
CASC3-206ENST00000579238 SGK494Q96LW2 274 aa5.6□□□□□ -1.51
CASC3-206ENST00000579238 PARLQ9H300 379 aa5.6□□□□□ -1.51
CASC3-206ENST00000579238 IGKV2D-24A0A075B6R9 120 aa5.59□□□□□ -1.51
CASC3-206ENST00000579238 GCGP01275 180 aa5.59□□□□□ -1.51
CASC3-206ENST00000579238 IGLV2-8P01709 118 aa5.59□□□□□ -1.51
CASC3-206ENST00000579238 FGF8P55075 233 aaPredicted RBP5.59□□□□□ -1.51
CASC3-206ENST00000579238 SMUG1Q53HV7 270 aa5.59□□□□□ -1.51
CASC3-206ENST00000579238 PIK3CD-AS1Q5SR53 167 aa5.59□□□□□ -1.51
CASC3-206ENST00000579238 TMEM75Q8N9X5 138 aa5.59□□□□□ -1.51
CASC3-206ENST00000579238 C5orf17Q8NAS9 161 aa5.59□□□□□ -1.51
CASC3-206ENST00000579238 PPP1R1CQ8WVI7 109 aa5.59□□□□□ -1.51
CASC3-206ENST00000579238 LINC00479Q96M42 142 aa5.59□□□□□ -1.51
CASC3-206ENST00000579238 PSG8Q9UQ74 426 aa5.59□□□□□ -1.51
CASC3-206ENST00000579238 URGCP-MRPS24S4R325 110 aa5.59□□□□□ -1.51
CASC3-206ENST00000579238 K7EQM0 130 aa5.58□□□□□ -1.52
CASC3-206ENST00000579238 TCRAP04437 139 aa5.58□□□□□ -1.52
CASC3-206ENST00000579238 PET100P0DJ07 73 aa5.58□□□□□ -1.52
CASC3-206ENST00000579238 RAB2AP61019 212 aa5.58□□□□□ -1.52
CASC3-206ENST00000579238 LGALSLQ3ZCW2 172 aaPredicted RBP5.58□□□□□ -1.52
CASC3-206ENST00000579238 ZFP69Q49AA0 526 aa5.58□□□□□ -1.52
CASC3-206ENST00000579238 NIT1Q86X76 327 aa5.58□□□□□ -1.52
CASC3-206ENST00000579238 OR2T35Q8NGX2 323 aa5.58□□□□□ -1.52
CASC3-206ENST00000579238 SAMD10Q9BYL1 202 aa5.58□□□□□ -1.52
CASC3-206ENST00000579238 SMIM3Q9BZL3 60 aa5.58□□□□□ -1.52
CASC3-206ENST00000579238 Q9UF83 564 aa5.58□□□□□ -1.52
CASC3-206ENST00000579238 PKHD1L1Q86WI1 4243 aa5.57□□□□□ -1.52
CASC3-206ENST00000579238 HMGB3O15347 200 aaKnown RBP5.57□□□□□ -1.52
CASC3-206ENST00000579238 MPC2O95563 127 aa5.57□□□□□ -1.52
CASC3-206ENST00000579238 IGLV2-11P01706 119 aa5.57□□□□□ -1.52
CASC3-206ENST00000579238 ARL14EPLP0DKL9 152 aa5.57□□□□□ -1.52
CASC3-206ENST00000579238 S100A4P26447 101 aaKnown RBP5.57□□□□□ -1.52
CASC3-206ENST00000579238 RPL12P30050 165 aaKnown RBP5.57□□□□□ -1.52
CASC3-206ENST00000579238 H2BFSP57053 126 aa5.57□□□□□ -1.52
CASC3-206ENST00000579238 FLI1Q01543 452 aaPredicted RBP5.57□□□□□ -1.52
CASC3-206ENST00000579238 ELOBQ15370 118 aa5.57□□□□□ -1.52
CASC3-206ENST00000579238 C14orf177Q52M58 125 aa5.57□□□□□ -1.52
CASC3-206ENST00000579238 UFSP1Q6NVU6 142 aa5.57□□□□□ -1.52
CASC3-206ENST00000579238 PRNTQ86SH4 94 aa5.57□□□□□ -1.52
CASC3-206ENST00000579238 C14orf178Q8N769 122 aaPredicted RBP5.57□□□□□ -1.52
CASC3-206ENST00000579238 OR10G9Q8NGN4 311 aa5.57□□□□□ -1.52
CASC3-206ENST00000579238 OR10G7Q8NGN6 311 aa5.57□□□□□ -1.52
CASC3-206ENST00000579238 ENKURQ8TC29 256 aa5.57□□□□□ -1.52
CASC3-206ENST00000579238 SUN5Q8TC36 379 aa5.57□□□□□ -1.52
CASC3-206ENST00000579238 UBE2WQ96B02 151 aa5.57□□□□□ -1.52
CASC3-206ENST00000579238 DNAJC30Q96LL9 226 aa5.57□□□□□ -1.52
CASC3-206ENST00000579238 CHCHD7Q9BUK0 85 aa5.57□□□□□ -1.52
CASC3-206ENST00000579238 WFDC1Q9HC57 220 aa5.57□□□□□ -1.52
CASC3-206ENST00000579238 KLK12Q9UKR0 248 aa5.57□□□□□ -1.52
CASC3-206ENST00000579238 A0A087WX48 190 aa5.56□□□□□ -1.52
CASC3-206ENST00000579238 IGKV3D-20A0A0C4DH25 116 aa5.56□□□□□ -1.52
CASC3-206ENST00000579238 RHODO00212 210 aa5.56□□□□□ -1.52
CASC3-206ENST00000579238 STAG3L2P0CL84 134 aa5.56□□□□□ -1.52
CASC3-206ENST00000579238 STAG3L3P0CL85 134 aa5.56□□□□□ -1.52
CASC3-206ENST00000579238 GCHFRP30047 84 aa5.56□□□□□ -1.52
CASC3-206ENST00000579238 ASIPP42127 132 aa5.56□□□□□ -1.52
CASC3-206ENST00000579238 CDC34P49427 236 aaPredicted RBP5.56□□□□□ -1.52
CASC3-206ENST00000579238 RPL37AP61513 92 aaKnown RBP5.56□□□□□ -1.52
CASC3-206ENST00000579238 Q0VG73 95 aa5.56□□□□□ -1.52
CASC3-206ENST00000579238 SAPCD1Q5SSQ6 148 aa5.56□□□□□ -1.52
CASC3-206ENST00000579238 ATRAIDQ6UW56 229 aa5.56□□□□□ -1.52
CASC3-206ENST00000579238 JPT2Q9H910 190 aa5.56□□□□□ -1.52
CASC3-206ENST00000579238 IL36BQ9NZH7 164 aa5.56□□□□□ -1.52
CASC3-206ENST00000579238 EPDR1Q9UM22 224 aa5.56□□□□□ -1.52
CASC3-206ENST00000579238 FABP5P3A8MUU1 101 aa5.55□□□□□ -1.52
CASC3-206ENST00000579238 SUMO1P63165 101 aaKnown RBP5.55□□□□□ -1.52
CASC3-206ENST00000579238 DMRTA1Q5VZB9 504 aa5.55□□□□□ -1.52
CASC3-206ENST00000579238 KCNIP4Q6PIL6 250 aa5.55□□□□□ -1.52
CASC3-206ENST00000579238 RAB24Q969Q5 203 aa5.55□□□□□ -1.52
CASC3-206ENST00000579238 INMT-MINDY4F8WBC2 141 aa5.54□□□□□ -1.52
CASC3-206ENST00000579238 LINC00299Q6ZSB3 139 aa5.54□□□□□ -1.52
CASC3-206ENST00000579238 OR2G3Q8NGZ4 309 aa5.54□□□□□ -1.52
CASC3-206ENST00000579238 DAZAP1Q96EP5 407 aaKnown RBP5.54□□□□□ -1.52
CASC3-206ENST00000579238 C1orf43Q9BWL3 253 aa5.54□□□□□ -1.52
CASC3-206ENST00000579238 TMEM167BQ9NRX6 74 aa5.54□□□□□ -1.52
CASC3-206ENST00000579238 NDUFA13Q9P0J0 144 aa5.54□□□□□ -1.52
CASC3-206ENST00000579238 TRAV34A0A0B4J273 112 aa5.53□□□□□ -1.52
CASC3-206ENST00000579238 TRBV10-1A0A0K0K1A3 114 aa5.53□□□□□ -1.52
CASC3-206ENST00000579238 B4DEV8 164 aa5.53□□□□□ -1.52
CASC3-206ENST00000579238 H3BVH4 76 aa5.53□□□□□ -1.52
CASC3-206ENST00000579238 SSNA1O43805 119 aa5.53□□□□□ -1.52
CASC3-206ENST00000579238 CXorf1O96002 111 aa5.53□□□□□ -1.52
CASC3-206ENST00000579238 HNRNPA3P51991 378 aaKnown RBP5.53□□□□□ -1.52
CASC3-206ENST00000579238 DNLZQ5SXM8 178 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms