RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 COL12A1Q99715 3063 aa8.26□□□□□ -1.09
SKA2-204ENST00000578519 LINC01546A6NGU7 62 aa8.26□□□□□ -1.09
SKA2-204ENST00000578519 CBY3A6NI87 242 aa8.26□□□□□ -1.09
SKA2-204ENST00000578519 KNCNA6PVL3 124 aa8.26□□□□□ -1.09
SKA2-204ENST00000578519 SYS1-DBNDD2H3BUS1 97 aa8.26□□□□□ -1.09
SKA2-204ENST00000578519 CRXO43186 299 aaPredicted RBP8.26□□□□□ -1.09
SKA2-204ENST00000578519 SAP30O75446 220 aa8.26□□□□□ -1.09
SKA2-204ENST00000578519 INSP01308 110 aa8.26□□□□□ -1.09
SKA2-204ENST00000578519 RNASE3P12724 160 aaKnown RBP8.26□□□□□ -1.09
SKA2-204ENST00000578519 DDTP30046 118 aa8.26□□□□□ -1.09
SKA2-204ENST00000578519 FCER1GP30273 86 aa8.26□□□□□ -1.09
SKA2-204ENST00000578519 SMCPP49901 116 aaPredicted RBP8.26□□□□□ -1.09
SKA2-204ENST00000578519 PIK3CD-AS1Q5SR53 167 aa8.26□□□□□ -1.09
SKA2-204ENST00000578519 AMTNQ6UX39 209 aa8.26□□□□□ -1.09
SKA2-204ENST00000578519 KRTAP9-2Q9BYQ4 174 aa8.26□□□□□ -1.09
SKA2-204ENST00000578519 CREBBPQ92793 2442 aa8.26□□□□□ -1.09
SKA2-204ENST00000578519 IGHV3-16A0A0C4DH30 117 aa8.25□□□□□ -1.09
SKA2-204ENST00000578519 SMKR1H3BMG3 65 aa8.25□□□□□ -1.09
SKA2-204ENST00000578519 TCAPO15273 167 aa8.25□□□□□ -1.09
SKA2-204ENST00000578519 NCR2O95944 276 aa8.25□□□□□ -1.09
SKA2-204ENST00000578519 PF4P02776 101 aa8.25□□□□□ -1.09
SKA2-204ENST00000578519 MGPP08493 103 aa8.25□□□□□ -1.09
SKA2-204ENST00000578519 ZNF415Q09FC8 603 aa8.25□□□□□ -1.09
SKA2-204ENST00000578519 ORMDL2Q53FV1 153 aa8.25□□□□□ -1.09
SKA2-204ENST00000578519 CDPF1Q6NVV7 123 aa8.25□□□□□ -1.09
SKA2-204ENST00000578519 ZNF705AQ6ZN79 300 aaPredicted RBP8.25□□□□□ -1.09
SKA2-204ENST00000578519 SPATA12Q7Z6I5 190 aa8.25□□□□□ -1.09
SKA2-204ENST00000578519 PTH2Q96A98 100 aa8.25□□□□□ -1.09
SKA2-204ENST00000578519 C9orf85Q96MD7 179 aa8.25□□□□□ -1.09
SKA2-204ENST00000578519 SPXQ9BT56 116 aa8.25□□□□□ -1.09
SKA2-204ENST00000578519 PRO1933Q9H354 126 aa8.25□□□□□ -1.09
SKA2-204ENST00000578519 TRAV12-2A0A075B6T6 113 aa8.24□□□□□ -1.09
SKA2-204ENST00000578519 TRAV9-2A0A087WT02 112 aa8.24□□□□□ -1.09
SKA2-204ENST00000578519 KIR2DL5BA0A0G2JN68 375 aa8.24□□□□□ -1.09
SKA2-204ENST00000578519 KIR2DL5BA0A0G2JPC4 375 aa8.24□□□□□ -1.09
SKA2-204ENST00000578519 CRLF1O75462 422 aa8.24□□□□□ -1.09
SKA2-204ENST00000578519 ATP5LO75964 103 aa8.24□□□□□ -1.09
SKA2-204ENST00000578519 LAGE3Q14657 143 aa8.24□□□□□ -1.09
SKA2-204ENST00000578519 NSUN5P1Q3KNT7 163 aa8.24□□□□□ -1.09
SKA2-204ENST00000578519 PRR31Q5SQ13 230 aa8.24□□□□□ -1.09
SKA2-204ENST00000578519 KIR2DL5AQ8N109 375 aa8.24□□□□□ -1.09
SKA2-204ENST00000578519 C14orf178Q8N769 122 aaPredicted RBP8.24□□□□□ -1.09
SKA2-204ENST00000578519 POM121L12Q8N7R1 296 aa8.24□□□□□ -1.09
SKA2-204ENST00000578519 SMR3AQ99954 134 aa8.24□□□□□ -1.09
SKA2-204ENST00000578519 NDUFAF3Q9BU61 184 aa8.24□□□□□ -1.09
SKA2-204ENST00000578519 ZNF747Q9BV97 191 aa8.24□□□□□ -1.09
SKA2-204ENST00000578519 ZNF256Q9Y2P7 627 aaPredicted RBP8.24□□□□□ -1.09
SKA2-204ENST00000578519 INAFM1C9JVW0 142 aa8.23□□□□□ -1.09
SKA2-204ENST00000578519 H7C1H1 209 aa8.23□□□□□ -1.09
SKA2-204ENST00000578519 INSL3P51460 131 aa8.23□□□□□ -1.09
SKA2-204ENST00000578519 RPL32P62910 135 aaKnown RBP8.23□□□□□ -1.09
SKA2-204ENST00000578519 KIR3DS1Q14943 382 aa8.23□□□□□ -1.09
SKA2-204ENST00000578519 SPATA45Q537H7 98 aa8.23□□□□□ -1.09
SKA2-204ENST00000578519 Q6ZQT7 251 aa8.23□□□□□ -1.09
SKA2-204ENST00000578519 Q8N1Y9 231 aa8.23□□□□□ -1.09
SKA2-204ENST00000578519 LINC01587Q99440 93 aa8.23□□□□□ -1.09
SKA2-204ENST00000578519 C1QTNF4Q9BXJ3 329 aa8.23□□□□□ -1.09
SKA2-204ENST00000578519 ST20Q9HBF5 79 aa8.23□□□□□ -1.09
SKA2-204ENST00000578519 PAM16Q9Y3D7 125 aa8.23□□□□□ -1.09
SKA2-204ENST00000578519 KRTAP9-6A0A140TA67 174 aa8.22□□□□□ -1.09
SKA2-204ENST00000578519 LINC00587B1AMM8 73 aa8.22□□□□□ -1.09
SKA2-204ENST00000578519 F5H697 171 aa8.22□□□□□ -1.09
SKA2-204ENST00000578519 SUMO2P61956 95 aaKnown RBP8.22□□□□□ -1.09
SKA2-204ENST00000578519 LBHQ53QV2 105 aaPredicted RBP8.22□□□□□ -1.09
SKA2-204ENST00000578519 MRPL52Q86TS9 123 aaKnown RBP8.22□□□□□ -1.09
SKA2-204ENST00000578519 NRACQ8N912 160 aa8.22□□□□□ -1.09
SKA2-204ENST00000578519 IFI27L1Q96BM0 104 aa8.22□□□□□ -1.09
SKA2-204ENST00000578519 MIEN1Q9BRT3 115 aa8.22□□□□□ -1.09
SKA2-204ENST00000578519 TMEM208Q9BTX3 173 aa8.22□□□□□ -1.09
SKA2-204ENST00000578519 SMIM2Q9BVW6 85 aa8.22□□□□□ -1.09
SKA2-204ENST00000578519 UQCR10Q9UDW1 63 aa8.22□□□□□ -1.09
SKA2-204ENST00000578519 FBN2P35556 2912 aa8.22□□□□□ -1.09
SKA2-204ENST00000578519 A8MWV9 139 aa8.21□□□□□ -1.1
SKA2-204ENST00000578519 M0R2P5 195 aa8.21□□□□□ -1.1
SKA2-204ENST00000578519 VCYO14598 125 aa8.21□□□□□ -1.1
SKA2-204ENST00000578519 IGLV1-51P01701 117 aa8.21□□□□□ -1.1
SKA2-204ENST00000578519 LGALS9BQ3B8N2 356 aa8.21□□□□□ -1.1
SKA2-204ENST00000578519 LGALS9CQ6DKI2 356 aa8.21□□□□□ -1.1
SKA2-204ENST00000578519 MORN3Q6PF18 240 aaPredicted RBP8.21□□□□□ -1.1
SKA2-204ENST00000578519 Q8N976 141 aa8.21□□□□□ -1.1
SKA2-204ENST00000578519 NUDT3O95989 172 aa8.2□□□□□ -1.1
SKA2-204ENST00000578519 FXYD7P58549 80 aa8.2□□□□□ -1.1
SKA2-204ENST00000578519 ZNF876PQ49A33 203 aa8.2□□□□□ -1.1
SKA2-204ENST00000578519 LINC01545Q5VT33 79 aa8.2□□□□□ -1.1
SKA2-204ENST00000578519 TRPT1Q86TN4 253 aaKnown RBP8.2□□□□□ -1.1
SKA2-204ENST00000578519 KIR2DL4Q99706 377 aa8.2□□□□□ -1.1
SKA2-204ENST00000578519 GOLT1BQ9Y3E0 138 aa8.2□□□□□ -1.1
SKA2-204ENST00000578519 POLQO75417 2590 aa8.2□□□□□ -1.1
SKA2-204ENST00000578519 TACC2O95359 2948 aa8.19□□□□□ -1.1
SKA2-204ENST00000578519 UTP20O75691 2785 aaKnown RBP8.19□□□□□ -1.1
SKA2-204ENST00000578519 RHODO00212 210 aa8.19□□□□□ -1.1
SKA2-204ENST00000578519 PRSS1P07477 247 aa8.19□□□□□ -1.1
SKA2-204ENST00000578519 ZNF56Q15929 161 aa8.19□□□□□ -1.1
SKA2-204ENST00000578519 BEAN1Q3B7T3 259 aa8.19□□□□□ -1.1
SKA2-204ENST00000578519 ODF3L2Q3SX64 289 aa8.19□□□□□ -1.1
SKA2-204ENST00000578519 C9orf66Q5T8R8 295 aa8.19□□□□□ -1.1
SKA2-204ENST00000578519 TMEM158Q8WZ71 300 aa8.19□□□□□ -1.1
SKA2-204ENST00000578519 RASL10AQ92737 203 aa8.19□□□□□ -1.1
SKA2-204ENST00000578519 PMCHL2Q9BQD1 86 aa8.19□□□□□ -1.1
SKA2-204ENST00000578519 MCRIP2Q9BUT9 160 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms