RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 NPBQ8NG41 125 aa10.51□□□□□ -0.73
NDEL1-204ENST00000578172 JPT2Q9H910 190 aa10.51□□□□□ -0.73
NDEL1-204ENST00000578172 A0A096LNJ9 63 aa10.51□□□□□ -0.73
NDEL1-204ENST00000578172 IGHV4-61A0A0C4DH41 118 aa10.51□□□□□ -0.73
NDEL1-204ENST00000578172 GEMIN7Q9H840 131 aaKnown RBP10.51□□□□□ -0.73
NDEL1-204ENST00000578172 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.51□□□□□ -0.73
NDEL1-204ENST00000578172 LY6G5BQ8NDX9 201 aa10.51□□□□□ -0.73
NDEL1-204ENST00000578172 HOXA3O43365 443 aaPredicted RBP10.5□□□□□ -0.73
NDEL1-204ENST00000578172 PPBPP02775 128 aa10.5□□□□□ -0.73
NDEL1-204ENST00000578172 LYRM7Q5U5X0 104 aa10.5□□□□□ -0.73
NDEL1-204ENST00000578172 CENPVL3A0A0U1RRI6 287 aa10.5□□□□□ -0.73
NDEL1-204ENST00000578172 ZNF815PA8K554 130 aa10.5□□□□□ -0.73
NDEL1-204ENST00000578172 MRPS12O15235 138 aaKnown RBP10.5□□□□□ -0.73
NDEL1-204ENST00000578172 SYT8Q8NBV8 401 aa10.5□□□□□ -0.73
NDEL1-204ENST00000578172 C10orf99Q6UWK7 81 aa10.5□□□□□ -0.73
NDEL1-204ENST00000578172 CCL19Q99731 98 aa10.5□□□□□ -0.73
NDEL1-204ENST00000578172 CD7P09564 240 aa10.49□□□□□ -0.73
NDEL1-204ENST00000578172 HERVK_113P61574 105 aa10.49□□□□□ -0.73
NDEL1-204ENST00000578172 FAM110DQ8TAY7 271 aaPredicted RBP10.49□□□□□ -0.73
NDEL1-204ENST00000578172 NPFFR1Q9GZQ6 430 aa10.49□□□□□ -0.73
NDEL1-204ENST00000578172 UBE2E1P51965 193 aa10.49□□□□□ -0.73
NDEL1-204ENST00000578172 C2orf91Q6ZV80 131 aa10.49□□□□□ -0.73
NDEL1-204ENST00000578172 A0A1B0GW15 77 aa10.48□□□□□ -0.73
NDEL1-204ENST00000578172 ODF3BA8MYP8 253 aa10.48□□□□□ -0.73
NDEL1-204ENST00000578172 ATP5LO75964 103 aa10.48□□□□□ -0.73
NDEL1-204ENST00000578172 RPL13AP40429 203 aaKnown RBP10.48□□□□□ -0.73
NDEL1-204ENST00000578172 PRR9Q5T870 116 aa10.48□□□□□ -0.73
NDEL1-204ENST00000578172 RHPN1-AS1Q9BWJ2 59 aa10.48□□□□□ -0.73
NDEL1-204ENST00000578172 IGHV3OR16-12A0A075B7B8 117 aa10.48□□□□□ -0.73
NDEL1-204ENST00000578172 MINOS1Q5TGZ0 78 aa10.48□□□□□ -0.73
NDEL1-204ENST00000578172 DUX3Q96PT4 197 aa10.48□□□□□ -0.73
NDEL1-204ENST00000578172 ATP6V0BQ99437 205 aa10.48□□□□□ -0.73
NDEL1-204ENST00000578172 MINOS1-NBL1R4GNA1 71 aa10.48□□□□□ -0.73
NDEL1-204ENST00000578172 IGHV4-39P01824 125 aa10.47□□□□□ -0.73
NDEL1-204ENST00000578172 RAX2Q96IS3 184 aa10.47□□□□□ -0.73
NDEL1-204ENST00000578172 KLK9Q9UKQ9 250 aa10.47□□□□□ -0.73
NDEL1-204ENST00000578172 DOPEY1Q5JWR5 2465 aa10.47□□□□□ -0.73
NDEL1-204ENST00000578172 CSMD2Q7Z408 3487 aa10.47□□□□□ -0.73
NDEL1-204ENST00000578172 SNCGO76070 127 aa10.47□□□□□ -0.73
NDEL1-204ENST00000578172 ZNF56Q15929 161 aa10.47□□□□□ -0.73
NDEL1-204ENST00000578172 PSMG4Q5JS54 123 aa10.47□□□□□ -0.73
NDEL1-204ENST00000578172 SLC50A1Q9BRV3 221 aa10.47□□□□□ -0.73
NDEL1-204ENST00000578172 IGHG4P01861 327 aa10.47□□□□□ -0.73
NDEL1-204ENST00000578172 ASIPP42127 132 aa10.47□□□□□ -0.73
NDEL1-204ENST00000578172 C20orf173Q96LM9 149 aa10.47□□□□□ -0.73
NDEL1-204ENST00000578172 TEX29Q8N6K0 151 aa10.46□□□□□ -0.73
NDEL1-204ENST00000578172 SIRPDQ9H106 197 aa10.46□□□□□ -0.73
NDEL1-204ENST00000578172 LAGE3Q14657 143 aa10.46□□□□□ -0.73
NDEL1-204ENST00000578172 CLUHP3Q96NS8 147 aa10.46□□□□□ -0.73
NDEL1-204ENST00000578172 NXT2Q9NPJ8 142 aaKnown RBP10.46□□□□□ -0.73
NDEL1-204ENST00000578172 CFAP46Q8IYW2 2715 aa10.46□□□□□ -0.74
NDEL1-204ENST00000578172 G3V4G9 280 aa10.46□□□□□ -0.74
NDEL1-204ENST00000578172 FAM159AQ6UWV7 190 aa10.46□□□□□ -0.74
NDEL1-204ENST00000578172 LINC01549A6NIU2 74 aa10.45□□□□□ -0.74
NDEL1-204ENST00000578172 KNCNA6PVL3 124 aa10.45□□□□□ -0.74
NDEL1-204ENST00000578172 RNF185Q96GF1 192 aa10.45□□□□□ -0.74
NDEL1-204ENST00000578172 MOB4Q9Y3A3 225 aa10.45□□□□□ -0.74
NDEL1-204ENST00000578172 TRAV26-1A0A087WT03 109 aa10.45□□□□□ -0.74
NDEL1-204ENST00000578172 UCNP55089 124 aa10.45□□□□□ -0.74
NDEL1-204ENST00000578172 PRM2P04554 102 aa10.45□□□□□ -0.74
NDEL1-204ENST00000578172 NPC2P61916 151 aa10.45□□□□□ -0.74
NDEL1-204ENST00000578172 ZFHX3Q15911 3703 aa10.44□□□□□ -0.74
NDEL1-204ENST00000578172 LMO4P61968 165 aa10.44□□□□□ -0.74
NDEL1-204ENST00000578172 LGALS9BQ3B8N2 356 aa10.44□□□□□ -0.74
NDEL1-204ENST00000578172 LGALS9CQ6DKI2 356 aa10.44□□□□□ -0.74
NDEL1-204ENST00000578172 IGHV4-30-2A0A087WSY4 118 aa10.44□□□□□ -0.74
NDEL1-204ENST00000578172 PRB1P04280 392 aa10.44□□□□□ -0.74
NDEL1-204ENST00000578172 KLHL30-AS1Q8NEE0 82 aa10.44□□□□□ -0.74
NDEL1-204ENST00000578172 PIMREGQ9BSJ6 248 aa10.44□□□□□ -0.74
NDEL1-204ENST00000578172 ZFAND3Q9H8U3 227 aa10.44□□□□□ -0.74
NDEL1-204ENST00000578172 CRXO43186 299 aaPredicted RBP10.44□□□□□ -0.74
NDEL1-204ENST00000578172 CELSR2Q9HCU4 2923 aa10.44□□□□□ -0.74
NDEL1-204ENST00000578172 TRBV25-1A0A075B6N4 114 aa10.43□□□□□ -0.74
NDEL1-204ENST00000578172 A0A0U1RRA0 63 aa10.43□□□□□ -0.74
NDEL1-204ENST00000578172 LGALS3P17931 250 aaKnown RBP10.43□□□□□ -0.74
NDEL1-204ENST00000578172 CHTOPQ9Y3Y2 248 aaKnown RBP10.43□□□□□ -0.74
NDEL1-204ENST00000578172 TRAV2A0A0B4J234 112 aa10.43□□□□□ -0.74
NDEL1-204ENST00000578172 SPINK13Q1W4C9 94 aa10.43□□□□□ -0.74
NDEL1-204ENST00000578172 RNASE13Q5GAN3 156 aaKnown RBP10.43□□□□□ -0.74
NDEL1-204ENST00000578172 SS18L2Q9UHA2 77 aa10.43□□□□□ -0.74
NDEL1-204ENST00000578172 C11orf71Q6IPW1 123 aa10.43□□□□□ -0.74
NDEL1-204ENST00000578172 C5orf56Q8N8D9 126 aa10.43□□□□□ -0.74
NDEL1-204ENST00000578172 DEFB136Q30KP8 78 aa10.42□□□□□ -0.74
NDEL1-204ENST00000578172 PTH2Q96A98 100 aa10.42□□□□□ -0.74
NDEL1-204ENST00000578172 CLPSL1A2RUU4 121 aa10.42□□□□□ -0.74
NDEL1-204ENST00000578172 IGLC6P0CF74 106 aa10.42□□□□□ -0.74
NDEL1-204ENST00000578172 SYNJ2BPP57105 145 aa10.42□□□□□ -0.74
NDEL1-204ENST00000578172 SRSF1Q07955 248 aaKnown RBP eCLIP10.42□□□□□ -0.74
NDEL1-204ENST00000578172 ODF1Q14990 250 aa10.42□□□□□ -0.74
NDEL1-204ENST00000578172 MAPKAPK5-AS1Q8N8E1 139 aa10.42□□□□□ -0.74
NDEL1-204ENST00000578172 TRBV20-1A0A075B6N2 111 aa10.41□□□□□ -0.74
NDEL1-204ENST00000578172 IGHV1-69DA0A0B4J2H0 117 aa10.41□□□□□ -0.74
NDEL1-204ENST00000578172 A8MWV9 139 aa10.41□□□□□ -0.74
NDEL1-204ENST00000578172 IGHV1-69P01742 117 aa10.41□□□□□ -0.74
NDEL1-204ENST00000578172 RPL39P62891 51 aaKnown RBP10.41□□□□□ -0.74
NDEL1-204ENST00000578172 TRAV21A0A0B4J279 112 aa10.41□□□□□ -0.74
NDEL1-204ENST00000578172 B5MCH6 92 aa10.41□□□□□ -0.74
NDEL1-204ENST00000578172 IGHV4-59P01825 116 aa10.41□□□□□ -0.74
NDEL1-204ENST00000578172 TRBV7-1A0A0A6YYK4 115 aa10.4□□□□□ -0.74
NDEL1-204ENST00000578172 HLA-DRB4P13762 266 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms