RNA–Protein interactions for RNA: ENST00000578018.5

CDK5RAP3-206, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-206ENST00000578018 SUMO1P63165 101 aaKnown RBP11.27□□□□□ -0.61
CDK5RAP3-206ENST00000578018 TXNDC17Q9BRA2 123 aa11.27□□□□□ -0.61
CDK5RAP3-206ENST00000578018 SDF2L1Q9HCN8 221 aa11.27□□□□□ -0.61
CDK5RAP3-206ENST00000578018 MSRB1Q9NZV6 116 aa11.27□□□□□ -0.61
CDK5RAP3-206ENST00000578018 BOLA1Q9Y3E2 137 aa11.27□□□□□ -0.61
CDK5RAP3-206ENST00000578018 A0A087WTM6 91 aa11.26□□□□□ -0.61
CDK5RAP3-206ENST00000578018 LOC100131303A0A0U1RQF7 123 aa11.26□□□□□ -0.61
CDK5RAP3-206ENST00000578018 PPT1P50897 306 aa11.26□□□□□ -0.61
CDK5RAP3-206ENST00000578018 EPDR1Q9UM22 224 aa11.26□□□□□ -0.61
CDK5RAP3-206ENST00000578018 TCRAP04437 139 aa11.25□□□□□ -0.61
CDK5RAP3-206ENST00000578018 EVI2AP22794 236 aa11.25□□□□□ -0.61
CDK5RAP3-206ENST00000578018 KCNS1Q96KK3 526 aa11.25□□□□□ -0.61
CDK5RAP3-206ENST00000578018 TCEAL7Q9BRU2 100 aa11.25□□□□□ -0.61
CDK5RAP3-206ENST00000578018 FBLL1A6NHQ2 334 aaKnown RBP11.24□□□□□ -0.61
CDK5RAP3-206ENST00000578018 TEX46H3BTG2 121 aa11.24□□□□□ -0.61
CDK5RAP3-206ENST00000578018 GATA1P15976 413 aaPredicted RBP11.24□□□□□ -0.61
CDK5RAP3-206ENST00000578018 UBE2G2P60604 165 aa11.24□□□□□ -0.61
CDK5RAP3-206ENST00000578018 SGK494Q96LW2 274 aa11.24□□□□□ -0.61
CDK5RAP3-206ENST00000578018 NDFIP1Q9BT67 221 aa11.24□□□□□ -0.61
CDK5RAP3-206ENST00000578018 K7EQM0 130 aa11.23□□□□□ -0.61
CDK5RAP3-206ENST00000578018 CRYGDP07320 174 aa11.23□□□□□ -0.61
CDK5RAP3-206ENST00000578018 ZNF80P51504 273 aaPredicted RBP11.23□□□□□ -0.61
CDK5RAP3-206ENST00000578018 TIRAPP58753 221 aa11.23□□□□□ -0.61
CDK5RAP3-206ENST00000578018 ALKAL2Q6UX46 152 aa11.23□□□□□ -0.61
CDK5RAP3-206ENST00000578018 SH2D6Q7Z4S9 175 aa11.23□□□□□ -0.61
CDK5RAP3-206ENST00000578018 HIST1H2BAQ96A08 127 aa11.23□□□□□ -0.61
CDK5RAP3-206ENST00000578018 C11orf21Q9P2W6 132 aa11.23□□□□□ -0.61
CDK5RAP3-206ENST00000578018 PAGE4O60829 102 aa11.22□□□□□ -0.61
CDK5RAP3-206ENST00000578018 CCL20P78556 96 aa11.22□□□□□ -0.61
CDK5RAP3-206ENST00000578018 C10orf126Q8N4M7 172 aa11.22□□□□□ -0.61
CDK5RAP3-206ENST00000578018 CYB561D1Q8N8Q1 229 aa11.22□□□□□ -0.61
CDK5RAP3-206ENST00000578018 NHLRC2Q8NBF2 726 aa11.22□□□□□ -0.61
CDK5RAP3-206ENST00000578018 IGLV2-11P01706 119 aa11.21□□□□□ -0.61
CDK5RAP3-206ENST00000578018 XGP55808 180 aa11.21□□□□□ -0.61
CDK5RAP3-206ENST00000578018 KRTAP10-1P60331 282 aa11.21□□□□□ -0.61
CDK5RAP3-206ENST00000578018 BLOC1S1P78537 153 aa11.21□□□□□ -0.61
CDK5RAP3-206ENST00000578018 ZNF876PQ49A33 203 aa11.21□□□□□ -0.61
CDK5RAP3-206ENST00000578018 TMEM75Q8N9X5 138 aa11.21□□□□□ -0.61
CDK5RAP3-206ENST00000578018 LYPD6BQ8NI32 183 aa11.21□□□□□ -0.61
CDK5RAP3-206ENST00000578018 MANBALQ9NQG1 85 aa11.21□□□□□ -0.61
CDK5RAP3-206ENST00000578018 FAT1Q14517 4588 aa11.2□□□□□ -0.62
CDK5RAP3-206ENST00000578018 A0A1B0GV50 99 aa11.2□□□□□ -0.62
CDK5RAP3-206ENST00000578018 EPM2AB3EWF7 344 aa11.2□□□□□ -0.62
CDK5RAP3-206ENST00000578018 PEX7O00628 323 aa11.2□□□□□ -0.62
CDK5RAP3-206ENST00000578018 RS1O15537 224 aa11.2□□□□□ -0.62
CDK5RAP3-206ENST00000578018 IFNA7P01567 189 aa11.2□□□□□ -0.62
CDK5RAP3-206ENST00000578018 LINC01556Q5JQF7 62 aa11.2□□□□□ -0.62
CDK5RAP3-206ENST00000578018 CFAP126Q5VTH2 177 aa11.2□□□□□ -0.62
CDK5RAP3-206ENST00000578018 CST9LP1Q5W188 147 aa11.2□□□□□ -0.62
CDK5RAP3-206ENST00000578018 SLC25A29Q8N8R3 303 aa11.2□□□□□ -0.62
CDK5RAP3-206ENST00000578018 C9orf85Q96MD7 179 aa11.2□□□□□ -0.62
CDK5RAP3-206ENST00000578018 PSG8Q9UQ74 426 aa11.2□□□□□ -0.62
CDK5RAP3-206ENST00000578018 DMBT1Q9UGM3 2413 aaPredicted RBP11.2□□□□□ -0.62
CDK5RAP3-206ENST00000578018 IGHV3-38A0A0C4DH36 116 aa11.19□□□□□ -0.62
CDK5RAP3-206ENST00000578018 GCGP01275 180 aa11.19□□□□□ -0.62
CDK5RAP3-206ENST00000578018 PFN1P07737 140 aaKnown RBP11.19□□□□□ -0.62
CDK5RAP3-206ENST00000578018 TRBV6-1A0A0K0K1D8 114 aa11.18□□□□□ -0.62
CDK5RAP3-206ENST00000578018 TRBV6-4A0A1B0GX49 114 aa11.18□□□□□ -0.62
CDK5RAP3-206ENST00000578018 CIDEAO60543 219 aa11.18□□□□□ -0.62
CDK5RAP3-206ENST00000578018 TAGLN2P37802 199 aaKnown RBP11.18□□□□□ -0.62
CDK5RAP3-206ENST00000578018 FLI1Q01543 452 aaPredicted RBP11.18□□□□□ -0.62
CDK5RAP3-206ENST00000578018 RHOHQ15669 191 aa11.18□□□□□ -0.62
CDK5RAP3-206ENST00000578018 ZNF506Q5JVG8 444 aa11.18□□□□□ -0.62
CDK5RAP3-206ENST00000578018 TEX261Q6UWH6 196 aa11.18□□□□□ -0.62
CDK5RAP3-206ENST00000578018 PRADC1Q9BSG0 188 aa11.18□□□□□ -0.62
CDK5RAP3-206ENST00000578018 GNG13Q9P2W3 67 aa11.18□□□□□ -0.62
CDK5RAP3-206ENST00000578018 VPS13BQ7Z7G8 4022 aa11.18□□□□□ -0.62
CDK5RAP3-206ENST00000578018 RNASE3P12724 160 aaKnown RBP11.17□□□□□ -0.62
CDK5RAP3-206ENST00000578018 SMUG1Q53HV7 270 aa11.17□□□□□ -0.62
CDK5RAP3-206ENST00000578018 SAPCD1Q5SSQ6 148 aa11.17□□□□□ -0.62
CDK5RAP3-206ENST00000578018 PRNTQ86SH4 94 aa11.17□□□□□ -0.62
CDK5RAP3-206ENST00000578018 PTH2Q96A98 100 aa11.17□□□□□ -0.62
CDK5RAP3-206ENST00000578018 LINC00479Q96M42 142 aa11.17□□□□□ -0.62
CDK5RAP3-206ENST00000578018 IGHV3-73A0A0B4J1V6 119 aa11.16□□□□□ -0.62
CDK5RAP3-206ENST00000578018 LRCOL1A6NCL2 159 aa11.16□□□□□ -0.62
CDK5RAP3-206ENST00000578018 PGPEP1LA6NFU8 196 aa11.16□□□□□ -0.62
CDK5RAP3-206ENST00000578018 IFNA1P01562 189 aa11.16□□□□□ -0.62
CDK5RAP3-206ENST00000578018 S100A9P06702 114 aaKnown RBP11.16□□□□□ -0.62
CDK5RAP3-206ENST00000578018 COX8CQ7Z4L0 72 aa11.16□□□□□ -0.62
CDK5RAP3-206ENST00000578018 FMC1Q96HJ9 113 aa11.16□□□□□ -0.62
CDK5RAP3-206ENST00000578018 TRAV8-6A0A0B4J262 113 aa11.15□□□□□ -0.62
CDK5RAP3-206ENST00000578018 TRAV34A0A0B4J273 112 aa11.15□□□□□ -0.62
CDK5RAP3-206ENST00000578018 IBA57-AS1B1ANH7 110 aa11.15□□□□□ -0.62
CDK5RAP3-206ENST00000578018 MGST1P10620 155 aaKnown RBP11.15□□□□□ -0.62
CDK5RAP3-206ENST00000578018 GCSHP23434 173 aa11.15□□□□□ -0.62
CDK5RAP3-206ENST00000578018 OR10J3Q5JRS4 329 aa11.15□□□□□ -0.62
CDK5RAP3-206ENST00000578018 LELP1Q5T871 98 aa11.15□□□□□ -0.62
CDK5RAP3-206ENST00000578018 C11orf52Q96A22 123 aa11.15□□□□□ -0.62
CDK5RAP3-206ENST00000578018 ZFP30Q9Y2G7 519 aa11.15□□□□□ -0.62
CDK5RAP3-206ENST00000578018 PSCAO43653 123 aa11.14□□□□□ -0.63
CDK5RAP3-206ENST00000578018 BCL2P10415 239 aa11.14□□□□□ -0.63
CDK5RAP3-206ENST00000578018 VAX2Q9UIW0 290 aa11.14□□□□□ -0.63
CDK5RAP3-206ENST00000578018 FLG2Q5D862 2391 aaPredicted RBP11.14□□□□□ -0.63
CDK5RAP3-206ENST00000578018 HERC1Q15751 4861 aa11.13□□□□□ -0.63
CDK5RAP3-206ENST00000578018 IGKV3D-20A0A0C4DH25 116 aa11.13□□□□□ -0.63
CDK5RAP3-206ENST00000578018 SCO2A0A1W2PP80 73 aa11.13□□□□□ -0.63
CDK5RAP3-206ENST00000578018 PDE6DO43924 150 aa11.13□□□□□ -0.63
CDK5RAP3-206ENST00000578018 MEF2BQ02080 365 aaPredicted RBP11.13□□□□□ -0.63
CDK5RAP3-206ENST00000578018 Q5VSD8 79 aa11.13□□□□□ -0.63
CDK5RAP3-206ENST00000578018 Q86TA4 180 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms