RNA–Protein interactions for RNA: ENST00000577854.1

CDKN2A-211, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3

Gene CDKN2A, Length 442 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-211ENST00000577854 TRAV1-1A0A0B4J248 108 aa6.4□□□□□ -1.38
CDKN2A-211ENST00000577854 IGKV3D-20A0A0C4DH25 116 aa6.4□□□□□ -1.38
CDKN2A-211ENST00000577854 PGPEP1LA6NFU8 196 aa6.4□□□□□ -1.38
CDKN2A-211ENST00000577854 PRSS29PA6NIE9 313 aa6.4□□□□□ -1.38
CDKN2A-211ENST00000577854 M0R381 172 aa6.4□□□□□ -1.38
CDKN2A-211ENST00000577854 ARMS2P0C7Q2 107 aa6.4□□□□□ -1.38
CDKN2A-211ENST00000577854 RPL35P42766 123 aaKnown RBP6.4□□□□□ -1.38
CDKN2A-211ENST00000577854 TTC32Q5I0X7 151 aa6.4□□□□□ -1.38
CDKN2A-211ENST00000577854 FAM74A4Q5TZK3 123 aa6.4□□□□□ -1.38
CDKN2A-211ENST00000577854 LINC00336Q6ZUF6 198 aa6.4□□□□□ -1.38
CDKN2A-211ENST00000577854 NEGR1Q7Z3B1 354 aa6.4□□□□□ -1.38
CDKN2A-211ENST00000577854 C9orf85Q96MD7 179 aa6.4□□□□□ -1.38
CDKN2A-211ENST00000577854 PRADC1Q9BSG0 188 aa6.4□□□□□ -1.38
CDKN2A-211ENST00000577854 MRPS16Q9Y3D3 137 aaKnown RBP6.4□□□□□ -1.38
CDKN2A-211ENST00000577854 PHLDA3Q9Y5J5 127 aa6.4□□□□□ -1.38
CDKN2A-211ENST00000577854 EPPK1P58107 5090 aaKnown RBP6.4□□□□□ -1.39
CDKN2A-211ENST00000577854 TRBV6-1A0A0K0K1D8 114 aa6.39□□□□□ -1.39
CDKN2A-211ENST00000577854 LOC100131303A0A0U1RQF7 123 aa6.39□□□□□ -1.39
CDKN2A-211ENST00000577854 KRBOX1C9JBD0 128 aa6.39□□□□□ -1.39
CDKN2A-211ENST00000577854 K7EQD1 137 aa6.39□□□□□ -1.39
CDKN2A-211ENST00000577854 PDE6DO43924 150 aa6.39□□□□□ -1.39
CDKN2A-211ENST00000577854 NXPH4O95158 308 aa6.39□□□□□ -1.39
CDKN2A-211ENST00000577854 BCL2P10415 239 aa6.39□□□□□ -1.39
CDKN2A-211ENST00000577854 RNASE3P12724 160 aaKnown RBP6.39□□□□□ -1.39
CDKN2A-211ENST00000577854 TAGLN2P37802 199 aaKnown RBP6.39□□□□□ -1.39
CDKN2A-211ENST00000577854 CRIP1P50238 77 aa6.39□□□□□ -1.39
CDKN2A-211ENST00000577854 CEBPGP53567 150 aa6.39□□□□□ -1.39
CDKN2A-211ENST00000577854 SSTP61278 116 aa6.39□□□□□ -1.39
CDKN2A-211ENST00000577854 MEF2BQ02080 365 aaPredicted RBP6.39□□□□□ -1.39
CDKN2A-211ENST00000577854 ZNF674Q2M3X9 581 aa6.39□□□□□ -1.39
CDKN2A-211ENST00000577854 CENPWQ5EE01 88 aa6.39□□□□□ -1.39
CDKN2A-211ENST00000577854 CFAP126Q5VTH2 177 aa6.39□□□□□ -1.39
CDKN2A-211ENST00000577854 DAZAP1Q96EP5 407 aaKnown RBP6.39□□□□□ -1.39
CDKN2A-211ENST00000577854 DERL1Q9BUN8 251 aa6.39□□□□□ -1.39
CDKN2A-211ENST00000577854 MED9Q9NWA0 146 aa6.39□□□□□ -1.39
CDKN2A-211ENST00000577854 A8MWV9 139 aa6.38□□□□□ -1.39
CDKN2A-211ENST00000577854 SIVA1O15304 175 aa6.38□□□□□ -1.39
CDKN2A-211ENST00000577854 RS1O15537 224 aa6.38□□□□□ -1.39
CDKN2A-211ENST00000577854 GATA1P15976 413 aaPredicted RBP6.38□□□□□ -1.39
CDKN2A-211ENST00000577854 GNG4P50150 75 aa6.38□□□□□ -1.39
CDKN2A-211ENST00000577854 RPL19P84098 196 aaKnown RBP6.38□□□□□ -1.39
CDKN2A-211ENST00000577854 RHOHQ15669 191 aa6.38□□□□□ -1.39
CDKN2A-211ENST00000577854 LINC01559Q495D7 138 aa6.38□□□□□ -1.39
CDKN2A-211ENST00000577854 Q6ZR54 194 aa6.38□□□□□ -1.39
CDKN2A-211ENST00000577854 C6orf223Q8N319 242 aa6.38□□□□□ -1.39
CDKN2A-211ENST00000577854 SLC25A29Q8N8R3 303 aa6.38□□□□□ -1.39
CDKN2A-211ENST00000577854 TPPP3Q9BW30 176 aa6.38□□□□□ -1.39
CDKN2A-211ENST00000577854 IL36BQ9NZH7 164 aa6.38□□□□□ -1.39
CDKN2A-211ENST00000577854 VAX2Q9UIW0 290 aa6.38□□□□□ -1.39
CDKN2A-211ENST00000577854 KMT2AQ03164 3969 aa6.37□□□□□ -1.39
CDKN2A-211ENST00000577854 A0A087WWL8 130 aa6.37□□□□□ -1.39
CDKN2A-211ENST00000577854 MUC21A0A0G2JKD1 596 aa6.37□□□□□ -1.39
CDKN2A-211ENST00000577854 MUC21A0A140T8X8 626 aa6.37□□□□□ -1.39
CDKN2A-211ENST00000577854 RAB19A4D1S5 217 aa6.37□□□□□ -1.39
CDKN2A-211ENST00000577854 RTL8CO15255 209 aa6.37□□□□□ -1.39
CDKN2A-211ENST00000577854 SPANXN1Q5VSR9 72 aa6.37□□□□□ -1.39
CDKN2A-211ENST00000577854 DMRTA1Q5VZB9 504 aa6.37□□□□□ -1.39
CDKN2A-211ENST00000577854 LYPD5Q6UWN5 251 aa6.37□□□□□ -1.39
CDKN2A-211ENST00000577854 COX8CQ7Z4L0 72 aa6.37□□□□□ -1.39
CDKN2A-211ENST00000577854 SH2D6Q7Z4S9 175 aa6.37□□□□□ -1.39
CDKN2A-211ENST00000577854 ZFP82Q8N141 532 aa6.37□□□□□ -1.39
CDKN2A-211ENST00000577854 C11orf52Q96A22 123 aa6.37□□□□□ -1.39
CDKN2A-211ENST00000577854 UPK3BQ9BT76 320 aa6.37□□□□□ -1.39
CDKN2A-211ENST00000577854 JPT2Q9H910 190 aa6.37□□□□□ -1.39
CDKN2A-211ENST00000577854 VPS13DQ5THJ4 4388 aa6.36□□□□□ -1.39
CDKN2A-211ENST00000577854 TRBV6-4A0A1B0GX49 114 aa6.36□□□□□ -1.39
CDKN2A-211ENST00000577854 GAGE12JA6NER3 117 aa6.36□□□□□ -1.39
CDKN2A-211ENST00000577854 RHODO00212 210 aa6.36□□□□□ -1.39
CDKN2A-211ENST00000577854 CIDEAO60543 219 aa6.36□□□□□ -1.39
CDKN2A-211ENST00000577854 IFITM2Q01629 132 aa6.36□□□□□ -1.39
CDKN2A-211ENST00000577854 GAGE1Q13065 139 aa6.36□□□□□ -1.39
CDKN2A-211ENST00000577854 GAGE4Q13068 117 aa6.36□□□□□ -1.39
CDKN2A-211ENST00000577854 GAGE5Q13069 117 aa6.36□□□□□ -1.39
CDKN2A-211ENST00000577854 GAGE13Q4V321 117 aa6.36□□□□□ -1.39
CDKN2A-211ENST00000577854 OR10J3Q5JRS4 329 aa6.36□□□□□ -1.39
CDKN2A-211ENST00000577854 CLLU1Q5K131 121 aa6.36□□□□□ -1.39
CDKN2A-211ENST00000577854 LYPD6BQ8NI32 183 aa6.36□□□□□ -1.39
CDKN2A-211ENST00000577854 PARLQ9H300 379 aa6.36□□□□□ -1.39
CDKN2A-211ENST00000577854 TRAV9-2A0A087WT02 112 aa6.35□□□□□ -1.39
CDKN2A-211ENST00000577854 P01737 135 aa6.35□□□□□ -1.39
CDKN2A-211ENST00000577854 EVI2AP22794 236 aa6.35□□□□□ -1.39
CDKN2A-211ENST00000577854 ZNF56Q15929 161 aa6.35□□□□□ -1.39
CDKN2A-211ENST00000577854 OR2D3Q8NGH3 330 aa6.35□□□□□ -1.39
CDKN2A-211ENST00000577854 PTH2Q96A98 100 aa6.35□□□□□ -1.39
CDKN2A-211ENST00000577854 SAMD10Q9BYL1 202 aa6.35□□□□□ -1.39
CDKN2A-211ENST00000577854 EIF5A2Q9GZV4 153 aaKnown RBP6.35□□□□□ -1.39
CDKN2A-211ENST00000577854 BIN3Q9NQY0 253 aa6.35□□□□□ -1.39
CDKN2A-211ENST00000577854 LY96Q9Y6Y9 160 aa6.35□□□□□ -1.39
CDKN2A-211ENST00000577854 MUC4Q99102 2169 aa6.35□□□□□ -1.39
CDKN2A-211ENST00000577854 BIRC6Q9NR09 4857 aa6.34□□□□□ -1.39
CDKN2A-211ENST00000577854 TRAV8-6A0A0B4J262 113 aa6.34□□□□□ -1.39
CDKN2A-211ENST00000577854 XKRY2A2RUG3 117 aa6.34□□□□□ -1.39
CDKN2A-211ENST00000577854 RBFOX3A6NFN3 312 aa6.34□□□□□ -1.39
CDKN2A-211ENST00000577854 F5H697 171 aa6.34□□□□□ -1.39
CDKN2A-211ENST00000577854 SMIM17P0DL12 118 aa6.34□□□□□ -1.39
CDKN2A-211ENST00000577854 TOR2AQ5JU69 321 aa6.34□□□□□ -1.39
CDKN2A-211ENST00000577854 PIK3CD-AS1Q5SR53 167 aa6.34□□□□□ -1.39
CDKN2A-211ENST00000577854 ZFP2Q6ZN57 461 aa6.34□□□□□ -1.39
CDKN2A-211ENST00000577854 WFDC10BQ8IUB3 73 aa6.34□□□□□ -1.39
CDKN2A-211ENST00000577854 OR10AG1Q8NH19 301 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms