RNA–Protein interactions for RNA: ENST00000577536.1

CDH8-204, Transcript of cadherin 8, humanhuman

TSL 3

Gene CDH8, Length 324 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-204ENST00000577536 TRGC2P03986 189 aa-0.79□□□□□ -2.54
CDH8-204ENST00000577536 IFNA6P05013 189 aa-0.79□□□□□ -2.54
CDH8-204ENST00000577536 SAA1P0DJI8 122 aaPredicted RBP-0.79□□□□□ -2.54
CDH8-204ENST00000577536 TPT1P13693 172 aaKnown RBP-0.79□□□□□ -2.54
CDH8-204ENST00000577536 CCL3L1P16619 93 aa-0.79□□□□□ -2.54
CDH8-204ENST00000577536 OGNP20774 298 aaKnown RBP-0.79□□□□□ -2.54
CDH8-204ENST00000577536 RPL35P42766 123 aaKnown RBP-0.79□□□□□ -2.54
CDH8-204ENST00000577536 INSL3P51460 131 aa-0.79□□□□□ -2.54
CDH8-204ENST00000577536 POLR2JP52435 117 aaKnown RBP-0.79□□□□□ -2.54
CDH8-204ENST00000577536 PIGYQ3MUY2 71 aa-0.79□□□□□ -2.54
CDH8-204ENST00000577536 SCGB2B2Q4G0G5 96 aa-0.79□□□□□ -2.54
CDH8-204ENST00000577536 Q5VV11 94 aa-0.79□□□□□ -2.54
CDH8-204ENST00000577536 NDUFA11Q86Y39 141 aa-0.79□□□□□ -2.54
CDH8-204ENST00000577536 OR10X1Q8NGY0 326 aa-0.79□□□□□ -2.54
CDH8-204ENST00000577536 SMIM7Q9BQ49 75 aa-0.79□□□□□ -2.54
CDH8-204ENST00000577536 OR2J1Q9GZK6 312 aa-0.79□□□□□ -2.54
CDH8-204ENST00000577536 LINC00472Q9H8W2 130 aa-0.79□□□□□ -2.54
CDH8-204ENST00000577536 CASZ1Q86V15 1759 aa-0.79□□□□□ -2.54
CDH8-204ENST00000577536 AKAP13Q12802 2813 aa-0.79□□□□□ -2.54
CDH8-204ENST00000577536 DNAH2Q9P225 4427 aa-0.8□□□□□ -2.54
CDH8-204ENST00000577536 WDR7Q9Y4E6 1490 aa-0.8□□□□□ -2.54
CDH8-204ENST00000577536 PIK3C2GO75747 1445 aa-0.8□□□□□ -2.54
CDH8-204ENST00000577536 ADGRL3Q9HAR2 1447 aa-0.8□□□□□ -2.54
CDH8-204ENST00000577536 PLXNB2O15031 1838 aa-0.8□□□□□ -2.54
CDH8-204ENST00000577536 WNK3Q9BYP7 1800 aa-0.8□□□□□ -2.54
CDH8-204ENST00000577536 CXorf51AA0A1B0GTR3 108 aa-0.8□□□□□ -2.54
CDH8-204ENST00000577536 LOC107986453A0A1B0GWG9 222 aa-0.8□□□□□ -2.54
CDH8-204ENST00000577536 TMEM210A6NLX4 147 aa-0.8□□□□□ -2.54
CDH8-204ENST00000577536 AIPO00170 330 aa-0.8□□□□□ -2.54
CDH8-204ENST00000577536 KPNA4O00629 521 aaPredicted RBP-0.8□□□□□ -2.54
CDH8-204ENST00000577536 HAMPP81172 84 aa-0.8□□□□□ -2.54
CDH8-204ENST00000577536 OR2T2Q6IF00 324 aa-0.8□□□□□ -2.54
CDH8-204ENST00000577536 CYP2G1PQ6ZSU1 146 aa-0.8□□□□□ -2.54
CDH8-204ENST00000577536 NEK7Q8TDX7 302 aa-0.8□□□□□ -2.54
CDH8-204ENST00000577536 COX7B2Q8TF08 81 aa-0.8□□□□□ -2.54
CDH8-204ENST00000577536 PPDPFLQ8WWR9 84 aa-0.8□□□□□ -2.54
CDH8-204ENST00000577536 MAFIPQ8WZ33 124 aa-0.8□□□□□ -2.54
CDH8-204ENST00000577536 CLEC2BQ92478 149 aa-0.8□□□□□ -2.54
CDH8-204ENST00000577536 GPX7Q96SL4 187 aaPredicted RBP-0.8□□□□□ -2.54
CDH8-204ENST00000577536 SDF2Q99470 211 aa-0.8□□□□□ -2.54
CDH8-204ENST00000577536 LXNQ9BS40 222 aa-0.8□□□□□ -2.54
CDH8-204ENST00000577536 SCN3BQ9NY72 215 aa-0.8□□□□□ -2.54
CDH8-204ENST00000577536 IL20Q9NYY1 176 aa-0.8□□□□□ -2.54
CDH8-204ENST00000577536 PRELID3BQ9Y3B1 194 aa-0.8□□□□□ -2.54
CDH8-204ENST00000577536 ANKRD11Q6UB99 2663 aaPredicted RBP-0.8□□□□□ -2.54
CDH8-204ENST00000577536 GOLGA4Q13439 2230 aaKnown RBP-0.8□□□□□ -2.54
CDH8-204ENST00000577536 SIPA1L3O60292 1781 aaPredicted RBP-0.8□□□□□ -2.54
CDH8-204ENST00000577536 N4BP2Q86UW6 1770 aaPredicted RBP-0.8□□□□□ -2.54
CDH8-204ENST00000577536 ZNF609O15014 1411 aa-0.81□□□□□ -2.54
CDH8-204ENST00000577536 USP54Q70EL1 1684 aa-0.81□□□□□ -2.54
CDH8-204ENST00000577536 USP9XQ93008 2570 aaPredicted RBP-0.81□□□□□ -2.54
CDH8-204ENST00000577536 H3BQV1 296 aa-0.81□□□□□ -2.54
CDH8-204ENST00000577536 PGRMC1O00264 195 aaKnown RBP-0.81□□□□□ -2.54
CDH8-204ENST00000577536 BANF1O75531 89 aa-0.81□□□□□ -2.54
CDH8-204ENST00000577536 NDUFC2O95298 119 aa-0.81□□□□□ -2.54
CDH8-204ENST00000577536 MAXP61244 160 aa-0.81□□□□□ -2.54
CDH8-204ENST00000577536 TAF1AQ15573 450 aaPredicted RBP-0.81□□□□□ -2.54
CDH8-204ENST00000577536 DEFB112Q30KQ8 113 aa-0.81□□□□□ -2.54
CDH8-204ENST00000577536 TMEM97Q5BJF2 176 aa-0.81□□□□□ -2.54
CDH8-204ENST00000577536 C3orf33Q6P1S2 294 aa-0.81□□□□□ -2.54
CDH8-204ENST00000577536 NUP35Q8NFH5 326 aa-0.81□□□□□ -2.54
CDH8-204ENST00000577536 BRK1Q8WUW1 75 aa-0.81□□□□□ -2.54
CDH8-204ENST00000577536 WFDC6Q9BQY6 131 aa-0.81□□□□□ -2.54
CDH8-204ENST00000577536 FXYD6Q9H0Q3 95 aa-0.81□□□□□ -2.54
CDH8-204ENST00000577536 MED11Q9P086 117 aa-0.81□□□□□ -2.54
CDH8-204ENST00000577536 PYCARDQ9ULZ3 195 aa-0.81□□□□□ -2.54
CDH8-204ENST00000577536 ATP6V1DQ9Y5K8 247 aa-0.81□□□□□ -2.54
CDH8-204ENST00000577536 NBASA2RRP1 2371 aa-0.81□□□□□ -2.54
CDH8-204ENST00000577536 ARAP1Q96P48 1450 aa-0.81□□□□□ -2.54
CDH8-204ENST00000577536 PLECQ15149 4684 aaKnown RBP-0.81□□□□□ -2.54
CDH8-204ENST00000577536 PTPRGP23470 1445 aa-0.81□□□□□ -2.54
CDH8-204ENST00000577536 PIK3C2AO00443 1686 aa-0.81□□□□□ -2.54
CDH8-204ENST00000577536 KDM3BQ7LBC6 1761 aa-0.82□□□□□ -2.54
CDH8-204ENST00000577536 ZMYM4Q5VZL5 1548 aa-0.82□□□□□ -2.54
CDH8-204ENST00000577536 TRAV16A0A0A6YYK6 109 aaPredicted RBP-0.82□□□□□ -2.54
CDH8-204ENST00000577536 TRAV2A0A0B4J234 112 aa-0.82□□□□□ -2.54
CDH8-204ENST00000577536 IGHV1-24A0A0C4DH33 117 aa-0.82□□□□□ -2.54
CDH8-204ENST00000577536 RIIAD1A6NNX1 92 aa-0.82□□□□□ -2.54
CDH8-204ENST00000577536 TMEM114B3SHH9 223 aa-0.82□□□□□ -2.54
CDH8-204ENST00000577536 HMGB3O15347 200 aaKnown RBP-0.82□□□□□ -2.54
CDH8-204ENST00000577536 APOA2P02652 100 aa-0.82□□□□□ -2.54
CDH8-204ENST00000577536 TPM3P06753 285 aa-0.82□□□□□ -2.54
CDH8-204ENST00000577536 SLC25A4P12235 298 aa-0.82□□□□□ -2.54
CDH8-204ENST00000577536 ADCYAP1P18509 176 aa-0.82□□□□□ -2.54
CDH8-204ENST00000577536 NCALDP61601 193 aa-0.82□□□□□ -2.54
CDH8-204ENST00000577536 HSPE1P61604 102 aaKnown RBP-0.82□□□□□ -2.54
CDH8-204ENST00000577536 LSM3P62310 102 aaKnown RBP-0.82□□□□□ -2.54
CDH8-204ENST00000577536 BLCAPP62952 87 aa-0.82□□□□□ -2.54
CDH8-204ENST00000577536 RTL8BQ17RB0 113 aa-0.82□□□□□ -2.54
CDH8-204ENST00000577536 C20orf197Q8N268 126 aa-0.82□□□□□ -2.54
CDH8-204ENST00000577536 MORN4Q8NDC4 146 aa-0.82□□□□□ -2.54
CDH8-204ENST00000577536 DEFB105AQ8NG35 78 aa-0.82□□□□□ -2.54
CDH8-204ENST00000577536 OR5H6Q8NGV6 325 aa-0.82□□□□□ -2.54
CDH8-204ENST00000577536 DGCR14Q96DF8 476 aaKnown RBP-0.82□□□□□ -2.54
CDH8-204ENST00000577536 BTF3L4Q96K17 158 aa-0.82□□□□□ -2.54
CDH8-204ENST00000577536 PRELID3AQ96N28 172 aa-0.82□□□□□ -2.54
CDH8-204ENST00000577536 RTL8AQ9BWD3 113 aa-0.82□□□□□ -2.54
CDH8-204ENST00000577536 NMNAT1Q9HAN9 279 aaPredicted RBP-0.82□□□□□ -2.54
CDH8-204ENST00000577536 TAF9BQ9HBM6 251 aa-0.82□□□□□ -2.54
CDH8-204ENST00000577536 FKBP11Q9NYL4 201 aa-0.82□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms