RNA–Protein interactions for RNA: ENST00000577483.1

SSH2-205, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 1,630 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-205ENST00000577483 DNAH5Q8TE73 4624 aa8.61□□□□□ -1.03
SSH2-205ENST00000577483 CRIP1P50238 77 aa8.61□□□□□ -1.03
SSH2-205ENST00000577483 NKX6-2Q9C056 277 aaPredicted RBP8.61□□□□□ -1.03
SSH2-205ENST00000577483 LY96Q9Y6Y9 160 aa8.61□□□□□ -1.03
SSH2-205ENST00000577483 HMSDA8MTL9 139 aa8.6□□□□□ -1.03
SSH2-205ENST00000577483 PPT1P50897 306 aa8.6□□□□□ -1.03
SSH2-205ENST00000577483 PTH2Q96A98 100 aa8.6□□□□□ -1.03
SSH2-205ENST00000577483 FABP5P3A8MUU1 101 aa8.59□□□□□ -1.03
SSH2-205ENST00000577483 BCL2L11O43521 198 aa8.59□□□□□ -1.03
SSH2-205ENST00000577483 SEC11BP0C7V7 166 aa8.59□□□□□ -1.03
SSH2-205ENST00000577483 DNAH10OSP0CZ25 163 aa8.59□□□□□ -1.03
SSH2-205ENST00000577483 NHLRC2Q8NBF2 726 aa8.59□□□□□ -1.03
SSH2-205ENST00000577483 A0A1B0GV50 99 aa8.58□□□□□ -1.04
SSH2-205ENST00000577483 TRBV6-4A0A1B0GX49 114 aa8.58□□□□□ -1.04
SSH2-205ENST00000577483 H3BVH4 76 aa8.58□□□□□ -1.04
SSH2-205ENST00000577483 RHOHQ15669 191 aa8.58□□□□□ -1.04
SSH2-205ENST00000577483 CST9LP1Q5W188 147 aa8.58□□□□□ -1.04
SSH2-205ENST00000577483 COX8CQ7Z4L0 72 aa8.58□□□□□ -1.04
SSH2-205ENST00000577483 FAM213BQ8TBF2 198 aa8.58□□□□□ -1.04
SSH2-205ENST00000577483 FMC1Q96HJ9 113 aa8.58□□□□□ -1.04
SSH2-205ENST00000577483 ZNF471Q9BX82 626 aaPredicted RBP8.58□□□□□ -1.04
SSH2-205ENST00000577483 KRTAP4-5Q9BYR2 181 aa8.58□□□□□ -1.04
SSH2-205ENST00000577483 PARLQ9H300 379 aa8.58□□□□□ -1.04
SSH2-205ENST00000577483 ABCA13Q86UQ4 5058 aa8.58□□□□□ -1.04
SSH2-205ENST00000577483 A0A0D9SG52 128 aa8.58□□□□□ -1.04
SSH2-205ENST00000577483 B4DEV8 164 aa8.58□□□□□ -1.04
SSH2-205ENST00000577483 M0R036 132 aa8.58□□□□□ -1.04
SSH2-205ENST00000577483 PAGE4O60829 102 aa8.58□□□□□ -1.04
SSH2-205ENST00000577483 SH2D1AO60880 128 aa8.58□□□□□ -1.04
SSH2-205ENST00000577483 LTAP01374 205 aa8.58□□□□□ -1.04
SSH2-205ENST00000577483 S100A4P26447 101 aaKnown RBP8.58□□□□□ -1.04
SSH2-205ENST00000577483 ASIPP42127 132 aa8.58□□□□□ -1.04
SSH2-205ENST00000577483 UBE2G1P62253 170 aa8.58□□□□□ -1.04
SSH2-205ENST00000577483 Q6ZSN1 163 aa8.58□□□□□ -1.04
SSH2-205ENST00000577483 STOML3Q8TAV4 291 aa8.58□□□□□ -1.04
SSH2-205ENST00000577483 JPT2Q9H910 190 aa8.58□□□□□ -1.04
SSH2-205ENST00000577483 IL36BQ9NZH7 164 aa8.58□□□□□ -1.04
SSH2-205ENST00000577483 ZFP30Q9Y2G7 519 aa8.58□□□□□ -1.04
SSH2-205ENST00000577483 APOBP04114 4563 aaKnown RBP8.57□□□□□ -1.04
SSH2-205ENST00000577483 TRBV6-1A0A0K0K1D8 114 aa8.57□□□□□ -1.04
SSH2-205ENST00000577483 KANTRA0A1W2PQU2 76 aa8.57□□□□□ -1.04
SSH2-205ENST00000577483 KRBOX1C9JBD0 128 aa8.57□□□□□ -1.04
SSH2-205ENST00000577483 CIDEAO60543 219 aa8.57□□□□□ -1.04
SSH2-205ENST00000577483 CDK2AP2O75956 126 aa8.57□□□□□ -1.04
SSH2-205ENST00000577483 MGST1P10620 155 aaKnown RBP8.57□□□□□ -1.04
SSH2-205ENST00000577483 FUSP35637 526 aaKnown RBP eCLIP8.57□□□□□ -1.04
SSH2-205ENST00000577483 TIRAPP58753 221 aa8.57□□□□□ -1.04
SSH2-205ENST00000577483 ZNF674Q2M3X9 581 aa8.57□□□□□ -1.04
SSH2-205ENST00000577483 SH2D6Q7Z4S9 175 aa8.57□□□□□ -1.04
SSH2-205ENST00000577483 SFT2D1Q8WV19 159 aa8.57□□□□□ -1.04
SSH2-205ENST00000577483 MBD3L1Q8WWY6 194 aa8.57□□□□□ -1.04
SSH2-205ENST00000577483 TCEAL7Q9BRU2 100 aa8.57□□□□□ -1.04
SSH2-205ENST00000577483 PRADC1Q9BSG0 188 aa8.57□□□□□ -1.04
SSH2-205ENST00000577483 SAMD10Q9BYL1 202 aa8.57□□□□□ -1.04
SSH2-205ENST00000577483 GRIFINA4D1Z8 144 aa8.56□□□□□ -1.04
SSH2-205ENST00000577483 UMAD1C9J7I0 102 aa8.56□□□□□ -1.04
SSH2-205ENST00000577483 EVI2AP22794 236 aa8.56□□□□□ -1.04
SSH2-205ENST00000577483 AKR1C3P42330 323 aa8.56□□□□□ -1.04
SSH2-205ENST00000577483 DNLZQ5SXM8 178 aa8.56□□□□□ -1.04
SSH2-205ENST00000577483 UFSP1Q6NVU6 142 aa8.56□□□□□ -1.04
SSH2-205ENST00000577483 MSRB1Q9NZV6 116 aa8.56□□□□□ -1.04
SSH2-205ENST00000577483 Q9UF83 564 aa8.56□□□□□ -1.04
SSH2-205ENST00000577483 TRAV9-2A0A087WT02 112 aa8.55□□□□□ -1.04
SSH2-205ENST00000577483 IGHV3-38A0A0C4DH36 116 aa8.55□□□□□ -1.04
SSH2-205ENST00000577483 SCO2A0A1W2PP80 73 aa8.55□□□□□ -1.04
SSH2-205ENST00000577483 A8MWV9 139 aa8.55□□□□□ -1.04
SSH2-205ENST00000577483 CRYGDP07320 174 aa8.55□□□□□ -1.04
SSH2-205ENST00000577483 ARMS2P0C7Q2 107 aa8.55□□□□□ -1.04
SSH2-205ENST00000577483 LINC00694P0DN24 101 aa8.55□□□□□ -1.04
SSH2-205ENST00000577483 LGALSLQ3ZCW2 172 aaPredicted RBP8.55□□□□□ -1.04
SSH2-205ENST00000577483 PIK3CD-AS1Q5SR53 167 aa8.55□□□□□ -1.04
SSH2-205ENST00000577483 FAM162BQ5T6X4 162 aa8.55□□□□□ -1.04
SSH2-205ENST00000577483 TMUB2Q71RG4 321 aa8.55□□□□□ -1.04
SSH2-205ENST00000577483 TMSB15BA0A087X1C1 80 aa8.54□□□□□ -1.04
SSH2-205ENST00000577483 J3QL48 77 aa8.54□□□□□ -1.04
SSH2-205ENST00000577483 K7EP13 123 aa8.54□□□□□ -1.04
SSH2-205ENST00000577483 ZFP2Q6ZN57 461 aa8.54□□□□□ -1.04
SSH2-205ENST00000577483 NFE4Q86UQ8 179 aa8.54□□□□□ -1.04
SSH2-205ENST00000577483 PGPEP1Q9NXJ5 209 aa8.54□□□□□ -1.04
SSH2-205ENST00000577483 ERVFC1-1P60608 527 aa8.54□□□□□ -1.04
SSH2-205ENST00000577483 LINC01556Q5JQF7 62 aa8.54□□□□□ -1.04
SSH2-205ENST00000577483 C14orf178Q8N769 122 aaPredicted RBP8.54□□□□□ -1.04
SSH2-205ENST00000577483 SCRT2Q9NQ03 307 aa8.54□□□□□ -1.04
SSH2-205ENST00000577483 A0A087WTM6 91 aa8.53□□□□□ -1.04
SSH2-205ENST00000577483 PFDN1O60925 122 aa8.53□□□□□ -1.04
SSH2-205ENST00000577483 H2AFB1P0C5Y9 115 aa8.53□□□□□ -1.04
SSH2-205ENST00000577483 TPT1P13693 172 aaKnown RBP8.53□□□□□ -1.04
SSH2-205ENST00000577483 OR10J3Q5JRS4 329 aa8.53□□□□□ -1.04
SSH2-205ENST00000577483 LELP1Q5T871 98 aa8.53□□□□□ -1.04
SSH2-205ENST00000577483 C10orf126Q8N4M7 172 aa8.53□□□□□ -1.04
SSH2-205ENST00000577483 ATP6V0E2Q8NHE4 81 aa8.53□□□□□ -1.04
SSH2-205ENST00000577483 GTSF1LQ9H1H1 148 aa8.53□□□□□ -1.04
SSH2-205ENST00000577483 GAGE12JA6NER3 117 aa8.52□□□□□ -1.05
SSH2-205ENST00000577483 RPL19P84098 196 aaKnown RBP8.52□□□□□ -1.05
SSH2-205ENST00000577483 GAGE1Q13065 139 aa8.52□□□□□ -1.05
SSH2-205ENST00000577483 GAGE4Q13068 117 aa8.52□□□□□ -1.05
SSH2-205ENST00000577483 GAGE5Q13069 117 aa8.52□□□□□ -1.05
SSH2-205ENST00000577483 GAGE13Q4V321 117 aa8.52□□□□□ -1.05
SSH2-205ENST00000577483 Q8N3U1 123 aa8.52□□□□□ -1.05
SSH2-205ENST00000577483 MLST8Q9BVC4 326 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms