RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 NUDT15Q9NV35 164 aa8.71□□□□□ -1.02
COPS3-214ENST00000577246 MBD2Q9UBB5 411 aa8.71□□□□□ -1.02
COPS3-214ENST00000577246 A0A087WX48 190 aa8.7□□□□□ -1.02
COPS3-214ENST00000577246 LINC00694P0DN24 101 aa8.7□□□□□ -1.02
COPS3-214ENST00000577246 Q0VG73 95 aa8.7□□□□□ -1.02
COPS3-214ENST00000577246 ZFP69Q49AA0 526 aa8.7□□□□□ -1.02
COPS3-214ENST00000577246 FFAR4Q5NUL3 377 aa8.7□□□□□ -1.02
COPS3-214ENST00000577246 PIK3CD-AS1Q5SR53 167 aa8.7□□□□□ -1.02
COPS3-214ENST00000577246 SDHCQ99643 169 aaPredicted RBP8.7□□□□□ -1.02
COPS3-214ENST00000577246 FAT3Q8TDW7 4589 aa8.7□□□□□ -1.02
COPS3-214ENST00000577246 PGPEP1LA6NFU8 196 aa8.69□□□□□ -1.02
COPS3-214ENST00000577246 K7EQM0 130 aa8.69□□□□□ -1.02
COPS3-214ENST00000577246 PQLC2Q6ZP29 291 aa8.69□□□□□ -1.02
COPS3-214ENST00000577246 NIT1Q86X76 327 aa8.69□□□□□ -1.02
COPS3-214ENST00000577246 UBE2WQ96B02 151 aa8.69□□□□□ -1.02
COPS3-214ENST00000577246 TVP23CQ96ET8 276 aa8.69□□□□□ -1.02
COPS3-214ENST00000577246 PARLQ9H300 379 aa8.69□□□□□ -1.02
COPS3-214ENST00000577246 KLK12Q9UKR0 248 aa8.69□□□□□ -1.02
COPS3-214ENST00000577246 OR5AC2Q9NZP5 309 aa8.68□□□□□ -1.02
COPS3-214ENST00000577246 PLA2G10O15496 165 aa8.67□□□□□ -1.02
COPS3-214ENST00000577246 GCGP01275 180 aa8.67□□□□□ -1.02
COPS3-214ENST00000577246 H2AFB2P0C5Z0 115 aa8.67□□□□□ -1.02
COPS3-214ENST00000577246 S100A4P26447 101 aaKnown RBP8.67□□□□□ -1.02
COPS3-214ENST00000577246 LGALSLQ3ZCW2 172 aaPredicted RBP8.67□□□□□ -1.02
COPS3-214ENST00000577246 ATRAIDQ6UW56 229 aa8.67□□□□□ -1.02
COPS3-214ENST00000577246 Q6ZRU5 148 aa8.67□□□□□ -1.02
COPS3-214ENST00000577246 OR2T35Q8NGX2 323 aa8.67□□□□□ -1.02
COPS3-214ENST00000577246 SCGB1C1Q8TD33 95 aa8.67□□□□□ -1.02
COPS3-214ENST00000577246 DAZAP1Q96EP5 407 aaKnown RBP8.67□□□□□ -1.02
COPS3-214ENST00000577246 C1orf43Q9BWL3 253 aa8.67□□□□□ -1.02
COPS3-214ENST00000577246 A0A1W2PPV4 95 aa8.66□□□□□ -1.02
COPS3-214ENST00000577246 RHODO00212 210 aa8.66□□□□□ -1.02
COPS3-214ENST00000577246 RNASE3P12724 160 aaKnown RBP8.66□□□□□ -1.02
COPS3-214ENST00000577246 SMUG1Q53HV7 270 aa8.66□□□□□ -1.02
COPS3-214ENST00000577246 DMRTA1Q5VZB9 504 aa8.66□□□□□ -1.02
COPS3-214ENST00000577246 LINC00479Q96M42 142 aa8.66□□□□□ -1.02
COPS3-214ENST00000577246 C11orf21Q9P2W6 132 aa8.66□□□□□ -1.02
COPS3-214ENST00000577246 A0A0D9SG52 128 aa8.65□□□□□ -1.02
COPS3-214ENST00000577246 CRPP02741 224 aa8.65□□□□□ -1.02
COPS3-214ENST00000577246 ZNF80P51504 273 aaPredicted RBP8.65□□□□□ -1.02
COPS3-214ENST00000577246 HNRNPA3P51991 378 aaKnown RBP8.65□□□□□ -1.02
COPS3-214ENST00000577246 GNG5P63218 68 aa8.65□□□□□ -1.02
COPS3-214ENST00000577246 CYCSP99999 105 aaKnown RBP8.65□□□□□ -1.02
COPS3-214ENST00000577246 LRRC37A5PQ49AS3 106 aa8.65□□□□□ -1.02
COPS3-214ENST00000577246 C5orf17Q8NAS9 161 aa8.65□□□□□ -1.02
COPS3-214ENST00000577246 HSD17B11Q8NBQ5 300 aa8.65□□□□□ -1.02
COPS3-214ENST00000577246 MT1HL1P0DM35 61 aa8.64□□□□□ -1.03
COPS3-214ENST00000577246 ASIPP42127 132 aa8.64□□□□□ -1.03
COPS3-214ENST00000577246 DGAT2L7PQ6IED9 249 aa8.64□□□□□ -1.03
COPS3-214ENST00000577246 TMEM75Q8N9X5 138 aa8.64□□□□□ -1.03
COPS3-214ENST00000577246 OR2G3Q8NGZ4 309 aa8.64□□□□□ -1.03
COPS3-214ENST00000577246 SGK494Q96LW2 274 aa8.64□□□□□ -1.03
COPS3-214ENST00000577246 SAMD10Q9BYL1 202 aa8.64□□□□□ -1.03
COPS3-214ENST00000577246 TCRAP04437 139 aa8.63□□□□□ -1.03
COPS3-214ENST00000577246 PET100P0DJ07 73 aa8.63□□□□□ -1.03
COPS3-214ENST00000577246 SAPCD1Q5SSQ6 148 aa8.63□□□□□ -1.03
COPS3-214ENST00000577246 C14orf178Q8N769 122 aaPredicted RBP8.63□□□□□ -1.03
COPS3-214ENST00000577246 ZC2HC1AQ96GY0 325 aa8.63□□□□□ -1.03
COPS3-214ENST00000577246 DNAJC30Q96LL9 226 aa8.63□□□□□ -1.03
COPS3-214ENST00000577246 PSG8Q9UQ74 426 aa8.63□□□□□ -1.03
COPS3-214ENST00000577246 FAM240BA0A1B0GVZ2 78 aa8.62□□□□□ -1.03
COPS3-214ENST00000577246 FLI1Q01543 452 aaPredicted RBP8.62□□□□□ -1.03
COPS3-214ENST00000577246 UFSP1Q6NVU6 142 aa8.62□□□□□ -1.03
COPS3-214ENST00000577246 OR10G7Q8NGN6 311 aa8.62□□□□□ -1.03
COPS3-214ENST00000577246 RBM38Q9H0Z9 239 aaKnown RBP8.62□□□□□ -1.03
COPS3-214ENST00000577246 HSPB11Q9Y547 144 aa8.62□□□□□ -1.03
COPS3-214ENST00000577246 TRBV10-1A0A0K0K1A3 114 aa8.61□□□□□ -1.03
COPS3-214ENST00000577246 USP17L23D6RBM5 183 aa8.61□□□□□ -1.03
COPS3-214ENST00000577246 TMEM262E9PQX1 116 aa8.61□□□□□ -1.03
COPS3-214ENST00000577246 PKIAP61925 76 aa8.61□□□□□ -1.03
COPS3-214ENST00000577246 RPL36AP83881 106 aaKnown RBP8.61□□□□□ -1.03
COPS3-214ENST00000577246 RPL19P84098 196 aaKnown RBP8.61□□□□□ -1.03
COPS3-214ENST00000577246 PRNTQ86SH4 94 aa8.61□□□□□ -1.03
COPS3-214ENST00000577246 RPL36ALQ969Q0 106 aaKnown RBP8.61□□□□□ -1.03
COPS3-214ENST00000577246 DPH3P1Q9H4G8 78 aa8.61□□□□□ -1.03
COPS3-214ENST00000577246 IL36BQ9NZH7 164 aa8.61□□□□□ -1.03
COPS3-214ENST00000577246 Q9UF83 564 aa8.61□□□□□ -1.03
COPS3-214ENST00000577246 H0YIZ8 118 aa8.6□□□□□ -1.03
COPS3-214ENST00000577246 EIF3GO75821 320 aaKnown RBP eCLIP8.6□□□□□ -1.03
COPS3-214ENST00000577246 HLA-DQA1P01909 254 aa8.6□□□□□ -1.03
COPS3-214ENST00000577246 FAM74A4Q5TZK3 123 aa8.6□□□□□ -1.03
COPS3-214ENST00000577246 MZT2BQ6NZ67 158 aa8.6□□□□□ -1.03
COPS3-214ENST00000577246 C9orf163Q8N9P6 203 aa8.6□□□□□ -1.03
COPS3-214ENST00000577246 IGKV3D-20A0A0C4DH25 116 aa8.59□□□□□ -1.03
COPS3-214ENST00000577246 FABP5P3A8MUU1 101 aa8.59□□□□□ -1.03
COPS3-214ENST00000577246 SIX6O95475 246 aa8.59□□□□□ -1.03
COPS3-214ENST00000577246 ARL14EPLP0DKL9 152 aa8.59□□□□□ -1.03
COPS3-214ENST00000577246 MIAQ16674 131 aa8.59□□□□□ -1.03
COPS3-214ENST00000577246 C15orf54Q8N8G6 183 aa8.59□□□□□ -1.03
COPS3-214ENST00000577246 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.59□□□□□ -1.03
COPS3-214ENST00000577246 OR11H4Q8NGC9 324 aa8.59□□□□□ -1.03
COPS3-214ENST00000577246 CCDC32Q9BV29 185 aa8.59□□□□□ -1.03
COPS3-214ENST00000577246 JPT2Q9H910 190 aa8.59□□□□□ -1.03
COPS3-214ENST00000577246 EPDR1Q9UM22 224 aa8.59□□□□□ -1.03
COPS3-214ENST00000577246 RNF213Q63HN8 5207 aa8.58□□□□□ -1.04
COPS3-214ENST00000577246 TRBV7-3A0A075B6L6 115 aa8.58□□□□□ -1.04
COPS3-214ENST00000577246 HMGB3O15347 200 aaKnown RBP8.58□□□□□ -1.04
COPS3-214ENST00000577246 ANGP03950 147 aaKnown RBP8.58□□□□□ -1.04
COPS3-214ENST00000577246 RPL12P30050 165 aaKnown RBP8.58□□□□□ -1.04
COPS3-214ENST00000577246 CDC34P49427 236 aaPredicted RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms