RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 PCNPQ8WW12 178 aaKnown RBP3.99□□□□□ -1.77
SMG6-219ENST00000575663 NPIPB3Q92617 1050 aa3.99□□□□□ -1.77
SMG6-219ENST00000575663 MRAP2Q96G30 205 aa3.99□□□□□ -1.77
SMG6-219ENST00000575663 LINC00467Q9BRT7 94 aa3.99□□□□□ -1.77
SMG6-219ENST00000575663 PRO1933Q9H354 126 aa3.99□□□□□ -1.77
SMG6-219ENST00000575663 SMDT1Q9H4I9 107 aa3.99□□□□□ -1.77
SMG6-219ENST00000575663 NPVFQ9HCQ7 196 aa3.99□□□□□ -1.77
SMG6-219ENST00000575663 UQCC1Q9NVA1 299 aa3.99□□□□□ -1.77
SMG6-219ENST00000575663 ICOSQ9Y6W8 199 aa3.99□□□□□ -1.77
SMG6-219ENST00000575663 TNXBP22105 4242 aa3.99□□□□□ -1.77
SMG6-219ENST00000575663 TRAV1-1A0A0B4J248 108 aa3.98□□□□□ -1.77
SMG6-219ENST00000575663 TRAV5A0A0B4J249 113 aa3.98□□□□□ -1.77
SMG6-219ENST00000575663 ZFP92A6NM28 416 aa3.98□□□□□ -1.77
SMG6-219ENST00000575663 H7BYZ3 331 aa3.98□□□□□ -1.77
SMG6-219ENST00000575663 CST7O76096 145 aa3.98□□□□□ -1.77
SMG6-219ENST00000575663 CFDP00746 253 aaPredicted RBP3.98□□□□□ -1.77
SMG6-219ENST00000575663 MT-ND4LP03901 98 aa3.98□□□□□ -1.77
SMG6-219ENST00000575663 SNRPCP09234 159 aaKnown RBP3.98□□□□□ -1.77
SMG6-219ENST00000575663 PMCHP20382 165 aa3.98□□□□□ -1.77
SMG6-219ENST00000575663 SULT1A2P50226 295 aa3.98□□□□□ -1.77
SMG6-219ENST00000575663 PPT1P50897 306 aa3.98□□□□□ -1.77
SMG6-219ENST00000575663 LYZP61626 148 aa3.98□□□□□ -1.77
SMG6-219ENST00000575663 RHOBP62745 196 aa3.98□□□□□ -1.77
SMG6-219ENST00000575663 SLC38A11Q08AI6 406 aa3.98□□□□□ -1.77
SMG6-219ENST00000575663 RHEBQ15382 184 aa3.98□□□□□ -1.77
SMG6-219ENST00000575663 IZUMO4Q1ZYL8 232 aa3.98□□□□□ -1.77
SMG6-219ENST00000575663 RPL7L1Q6DKI1 246 aaKnown RBP3.98□□□□□ -1.77
SMG6-219ENST00000575663 TMEM182Q6ZP80 229 aaPredicted RBP3.98□□□□□ -1.77
SMG6-219ENST00000575663 LINC01551Q86U37 167 aa3.98□□□□□ -1.77
SMG6-219ENST00000575663 LINC00612Q8N6U2 182 aa3.98□□□□□ -1.77
SMG6-219ENST00000575663 LYPD6BQ8NI32 183 aa3.98□□□□□ -1.77
SMG6-219ENST00000575663 C20orf173Q96LM9 149 aa3.98□□□□□ -1.77
SMG6-219ENST00000575663 MAP1LC3CQ9BXW4 147 aa3.98□□□□□ -1.77
SMG6-219ENST00000575663 SLC25A39Q9BZJ4 359 aaPredicted RBP3.98□□□□□ -1.77
SMG6-219ENST00000575663 WDR61Q9GZS3 305 aaKnown RBP3.98□□□□□ -1.77
SMG6-219ENST00000575663 CST9LQ9H4G1 147 aa3.98□□□□□ -1.77
SMG6-219ENST00000575663 WFDC1Q9HC57 220 aa3.98□□□□□ -1.77
SMG6-219ENST00000575663 SMCO4Q9NRQ5 59 aa3.98□□□□□ -1.77
SMG6-219ENST00000575663 FAM30AQ9NZY2 134 aa3.98□□□□□ -1.77
SMG6-219ENST00000575663 WDR83OSQ9Y284 106 aa3.98□□□□□ -1.77
SMG6-219ENST00000575663 TRGV2A0A075B6R0 118 aa3.97□□□□□ -1.77
SMG6-219ENST00000575663 GAGE10A6NGK3 116 aa3.97□□□□□ -1.77
SMG6-219ENST00000575663 PRSS46E5RG02 174 aa3.97□□□□□ -1.77
SMG6-219ENST00000575663 OR7C2O60412 319 aa3.97□□□□□ -1.77
SMG6-219ENST00000575663 NMBP08949 121 aa3.97□□□□□ -1.77
SMG6-219ENST00000575663 IAPPP10997 89 aa3.97□□□□□ -1.77
SMG6-219ENST00000575663 RPL29P47914 159 aaKnown RBP3.97□□□□□ -1.77
SMG6-219ENST00000575663 CAMPP49913 170 aa3.97□□□□□ -1.77
SMG6-219ENST00000575663 HIST1H1AQ02539 215 aaPredicted RBP3.97□□□□□ -1.77
SMG6-219ENST00000575663 KIR3DS1Q14943 382 aa3.97□□□□□ -1.77
SMG6-219ENST00000575663 TEPPQ6URK8 271 aa3.97□□□□□ -1.77
SMG6-219ENST00000575663 Q6ZSA8 131 aa3.97□□□□□ -1.77
SMG6-219ENST00000575663 OCC1Q8TAD7 63 aa3.97□□□□□ -1.77
SMG6-219ENST00000575663 VSIG2Q96IQ7 327 aa3.97□□□□□ -1.77
SMG6-219ENST00000575663 GPR82Q96P67 336 aa3.97□□□□□ -1.77
SMG6-219ENST00000575663 C20orf144Q9BQM9 153 aa3.97□□□□□ -1.77
SMG6-219ENST00000575663 LRCOL1A6NCL2 159 aa3.96□□□□□ -1.78
SMG6-219ENST00000575663 H3BP45 60 aa3.96□□□□□ -1.78
SMG6-219ENST00000575663 HMGB3O15347 200 aaKnown RBP3.96□□□□□ -1.78
SMG6-219ENST00000575663 PAX4O43316 350 aa3.96□□□□□ -1.78
SMG6-219ENST00000575663 HSBP1O75506 76 aa3.96□□□□□ -1.78
SMG6-219ENST00000575663 IFNA1P01562 189 aa3.96□□□□□ -1.78
SMG6-219ENST00000575663 CRYGDP07320 174 aa3.96□□□□□ -1.78
SMG6-219ENST00000575663 ATP6V0CP27449 155 aa3.96□□□□□ -1.78
SMG6-219ENST00000575663 MRPL23Q16540 153 aaKnown RBP3.96□□□□□ -1.78
SMG6-219ENST00000575663 TMEM241Q24JQ0 296 aa3.96□□□□□ -1.78
SMG6-219ENST00000575663 ALKAL2Q6UX46 152 aa3.96□□□□□ -1.78
SMG6-219ENST00000575663 SMIM20Q8N5G0 67 aa3.96□□□□□ -1.78
SMG6-219ENST00000575663 OR1B1Q8NGR6 318 aa3.96□□□□□ -1.78
SMG6-219ENST00000575663 TMED6Q8WW62 240 aa3.96□□□□□ -1.78
SMG6-219ENST00000575663 MBD3L1Q8WWY6 194 aa3.96□□□□□ -1.78
SMG6-219ENST00000575663 SLC35E1Q96K37 410 aa3.96□□□□□ -1.78
SMG6-219ENST00000575663 SIGMAR1Q99720 223 aa3.96□□□□□ -1.78
SMG6-219ENST00000575663 TXNDC17Q9BRA2 123 aa3.96□□□□□ -1.78
SMG6-219ENST00000575663 SLC25A22Q9H936 323 aa3.96□□□□□ -1.78
SMG6-219ENST00000575663 SS18L2Q9UHA2 77 aa3.96□□□□□ -1.78
SMG6-219ENST00000575663 CSDC2Q9Y534 153 aaKnown RBP3.96□□□□□ -1.78
SMG6-219ENST00000575663 A0A0U1RRA0 63 aa3.95□□□□□ -1.78
SMG6-219ENST00000575663 PHOX2AO14813 284 aa3.95□□□□□ -1.78
SMG6-219ENST00000575663 PPP1R2P9O14990 202 aa3.95□□□□□ -1.78
SMG6-219ENST00000575663 NXPH3O95157 252 aa3.95□□□□□ -1.78
SMG6-219ENST00000575663 GCGP01275 180 aa3.95□□□□□ -1.78
SMG6-219ENST00000575663 ORM1P02763 201 aa3.95□□□□□ -1.78
SMG6-219ENST00000575663 PLP1P60201 277 aa3.95□□□□□ -1.78
SMG6-219ENST00000575663 ZNF90Q03938 601 aa3.95□□□□□ -1.78
SMG6-219ENST00000575663 ARL16Q0P5N6 197 aa3.95□□□□□ -1.78
SMG6-219ENST00000575663 GAGE5Q13069 117 aa3.95□□□□□ -1.78
SMG6-219ENST00000575663 GAGE6Q13070 117 aa3.95□□□□□ -1.78
SMG6-219ENST00000575663 DAZ2Q13117 558 aaKnown RBP3.95□□□□□ -1.78
SMG6-219ENST00000575663 ACOT6Q3I5F7 207 aaPredicted RBP3.95□□□□□ -1.78
SMG6-219ENST00000575663 C6orf226Q5I0X4 101 aa3.95□□□□□ -1.78
SMG6-219ENST00000575663 LYPD5Q6UWN5 251 aa3.95□□□□□ -1.78
SMG6-219ENST00000575663 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.95□□□□□ -1.78
SMG6-219ENST00000575663 Q6ZRG5 221 aa3.95□□□□□ -1.78
SMG6-219ENST00000575663 SCXQ7RTU7 201 aa3.95□□□□□ -1.78
SMG6-219ENST00000575663 NEGR1Q7Z3B1 354 aa3.95□□□□□ -1.78
SMG6-219ENST00000575663 NIT1Q86X76 327 aa3.95□□□□□ -1.78
SMG6-219ENST00000575663 WFDC10BQ8IUB3 73 aa3.95□□□□□ -1.78
SMG6-219ENST00000575663 RNF182Q8N6D2 247 aa3.95□□□□□ -1.78
SMG6-219ENST00000575663 THAP8Q8NA92 274 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms