RNA–Protein interactions for RNA: ENST00000575194.5

SPNS3-204, Transcript of sphingolipid transporter 3 (putative), humanhuman

TSL 1 (best)

Gene SPNS3, Length 1,721 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-204ENST00000575194 FOXI2Q6ZQN5 318 aa13.98□□□□□ -0.17
SPNS3-204ENST00000575194 C18orf65Q6ZTR6 163 aa13.98□□□□□ -0.17
SPNS3-204ENST00000575194 MRAP2Q96G30 205 aa13.98□□□□□ -0.17
SPNS3-204ENST00000575194 MIEN1Q9BRT3 115 aa13.98□□□□□ -0.17
SPNS3-204ENST00000575194 PHLDA3Q9Y5J5 127 aa13.98□□□□□ -0.17
SPNS3-204ENST00000575194 TIMM8BQ9Y5J9 83 aaPredicted RBP13.98□□□□□ -0.17
SPNS3-204ENST00000575194 ATRQ13535 2644 aa13.98□□□□□ -0.17
SPNS3-204ENST00000575194 TNFRSF6BO95407 300 aa13.98□□□□□ -0.17
SPNS3-204ENST00000575194 OR9G4Q8NGQ1 327 aa13.98□□□□□ -0.17
SPNS3-204ENST00000575194 SCRT2Q9NQ03 307 aa13.98□□□□□ -0.17
SPNS3-204ENST00000575194 HBDP02042 147 aa13.97□□□□□ -0.17
SPNS3-204ENST00000575194 EVI2AP22794 236 aa13.97□□□□□ -0.17
SPNS3-204ENST00000575194 TRAV9-2A0A087WT02 112 aa13.96□□□□□ -0.17
SPNS3-204ENST00000575194 LINC01546A6NGU7 62 aa13.96□□□□□ -0.17
SPNS3-204ENST00000575194 ZNF705AQ6ZN79 300 aaPredicted RBP13.96□□□□□ -0.17
SPNS3-204ENST00000575194 LINC00173Q6ZV60 143 aa13.96□□□□□ -0.17
SPNS3-204ENST00000575194 LBHQ53QV2 105 aaPredicted RBP13.95□□□□□ -0.18
SPNS3-204ENST00000575194 ADAMTSL5Q6ZMM2 481 aa13.95□□□□□ -0.18
SPNS3-204ENST00000575194 MRPL52Q86TS9 123 aaKnown RBP13.95□□□□□ -0.18
SPNS3-204ENST00000575194 OR2K2Q8NGT1 345 aa13.95□□□□□ -0.18
SPNS3-204ENST00000575194 ZNF747Q9BV97 191 aa13.95□□□□□ -0.18
SPNS3-204ENST00000575194 SPATA12Q7Z6I5 190 aa13.95□□□□□ -0.18
SPNS3-204ENST00000575194 DYNLRB2Q8TF09 96 aa13.95□□□□□ -0.18
SPNS3-204ENST00000575194 AP1S3Q96PC3 154 aa13.95□□□□□ -0.18
SPNS3-204ENST00000575194 DPH3P1Q9H4G8 78 aa13.95□□□□□ -0.18
SPNS3-204ENST00000575194 OR4C46A6NHA9 309 aa13.94□□□□□ -0.18
SPNS3-204ENST00000575194 M0R381 172 aa13.94□□□□□ -0.18
SPNS3-204ENST00000575194 NXPH4O95158 308 aa13.94□□□□□ -0.18
SPNS3-204ENST00000575194 CDKN1BP46527 198 aa13.94□□□□□ -0.18
SPNS3-204ENST00000575194 KIR3DS1Q14943 382 aa13.94□□□□□ -0.18
SPNS3-204ENST00000575194 C16orf95Q9H693 158 aa13.94□□□□□ -0.18
SPNS3-204ENST00000575194 PRSS47A8MTI9 375 aa13.93□□□□□ -0.18
SPNS3-204ENST00000575194 ATOH7Q8N100 152 aa13.93□□□□□ -0.18
SPNS3-204ENST00000575194 DEFB125Q8N687 156 aa13.93□□□□□ -0.18
SPNS3-204ENST00000575194 Q8N8P6 123 aa13.93□□□□□ -0.18
SPNS3-204ENST00000575194 UQCR10Q9UDW1 63 aa13.93□□□□□ -0.18
SPNS3-204ENST00000575194 TRAV12-3A0A0B4J271 114 aa13.93□□□□□ -0.18
SPNS3-204ENST00000575194 RNASE3P12724 160 aaKnown RBP13.93□□□□□ -0.18
SPNS3-204ENST00000575194 A0A096LNJ9 63 aa13.92□□□□□ -0.18
SPNS3-204ENST00000575194 GNRH2O43555 120 aa13.92□□□□□ -0.18
SPNS3-204ENST00000575194 NDUFA7O95182 113 aa13.92□□□□□ -0.18
SPNS3-204ENST00000575194 DLX4Q92988 240 aaPredicted RBP13.92□□□□□ -0.18
SPNS3-204ENST00000575194 HSBP1L1C9JCN9 74 aa13.91□□□□□ -0.18
SPNS3-204ENST00000575194 LINC01545Q5VT33 79 aa13.91□□□□□ -0.18
SPNS3-204ENST00000575194 NRACQ8N912 160 aa13.91□□□□□ -0.18
SPNS3-204ENST00000575194 DUX3Q96PT4 197 aa13.9□□□□□ -0.18
SPNS3-204ENST00000575194 PPP1R17O96001 155 aa13.9□□□□□ -0.18
SPNS3-204ENST00000575194 IGKV3-20P01619 116 aa13.9□□□□□ -0.18
SPNS3-204ENST00000575194 CD7P09564 240 aa13.9□□□□□ -0.18
SPNS3-204ENST00000575194 IGLC3P0DOY3 106 aa13.9□□□□□ -0.18
SPNS3-204ENST00000575194 LINC01006Q8NI28 216 aa13.9□□□□□ -0.18
SPNS3-204ENST00000575194 TENM1Q9UKZ4 2725 aa13.9□□□□□ -0.19
SPNS3-204ENST00000575194 GAS8-AS1O95177 125 aa13.89□□□□□ -0.19
SPNS3-204ENST00000575194 HLA-DRB4P13762 266 aa13.89□□□□□ -0.19
SPNS3-204ENST00000575194 GATA1P15976 413 aaPredicted RBP13.89□□□□□ -0.19
SPNS3-204ENST00000575194 FCER1GP30273 86 aa13.89□□□□□ -0.19
SPNS3-204ENST00000575194 FHL3Q13643 280 aa13.89□□□□□ -0.19
SPNS3-204ENST00000575194 TMEM61Q8N0U2 210 aa13.89□□□□□ -0.19
SPNS3-204ENST00000575194 ST20Q9HBF5 79 aa13.89□□□□□ -0.19
SPNS3-204ENST00000575194 TSSC4Q9Y5U2 329 aaPredicted RBP13.89□□□□□ -0.19
SPNS3-204ENST00000575194 HLA-DRB4X5D2U9 266 aa13.89□□□□□ -0.19
SPNS3-204ENST00000575194 FBN1P35555 2871 aaKnown RBP13.88□□□□□ -0.19
SPNS3-204ENST00000575194 A8MTW9 85 aa13.88□□□□□ -0.19
SPNS3-204ENST00000575194 H0Y8G0 127 aa13.88□□□□□ -0.19
SPNS3-204ENST00000575194 M0R143 59 aa13.88□□□□□ -0.19
SPNS3-204ENST00000575194 SMIM17P0DL12 118 aa13.88□□□□□ -0.19
SPNS3-204ENST00000575194 SPINK13Q1W4C9 94 aa13.88□□□□□ -0.19
SPNS3-204ENST00000575194 AMTNQ6UX39 209 aa13.88□□□□□ -0.19
SPNS3-204ENST00000575194 RAX2Q96IS3 184 aa13.88□□□□□ -0.19
SPNS3-204ENST00000575194 IGHV1OR15-1A0A075B7D0 117 aa13.87□□□□□ -0.19
SPNS3-204ENST00000575194 TRAV26-2A0A0B4J265 109 aa13.87□□□□□ -0.19
SPNS3-204ENST00000575194 TRAV25A0A0B4J276 109 aa13.87□□□□□ -0.19
SPNS3-204ENST00000575194 DEFB131AP59861 70 aa13.87□□□□□ -0.19
SPNS3-204ENST00000575194 DEFB114Q30KQ6 69 aa13.87□□□□□ -0.19
SPNS3-204ENST00000575194 PRIMA1Q86XR5 153 aa13.87□□□□□ -0.19
SPNS3-204ENST00000575194 SYT8Q8NBV8 401 aa13.87□□□□□ -0.19
SPNS3-204ENST00000575194 IFI27L1Q96BM0 104 aa13.87□□□□□ -0.19
SPNS3-204ENST00000575194 SPAG8Q99932 426 aaPredicted RBP13.87□□□□□ -0.19
SPNS3-204ENST00000575194 C20orf78Q9BR46 151 aa13.87□□□□□ -0.19
SPNS3-204ENST00000575194 IGLV2-18A0A075B6J9 118 aa13.87□□□□□ -0.19
SPNS3-204ENST00000575194 MGPP08493 103 aa13.87□□□□□ -0.19
SPNS3-204ENST00000575194 CD28P10747 220 aa13.87□□□□□ -0.19
SPNS3-204ENST00000575194 LGALS9BQ3B8N2 356 aa13.87□□□□□ -0.19
SPNS3-204ENST00000575194 LGALS9CQ6DKI2 356 aa13.87□□□□□ -0.19
SPNS3-204ENST00000575194 C14orf178Q8N769 122 aaPredicted RBP13.87□□□□□ -0.19
SPNS3-204ENST00000575194 C2orf88Q9BSF0 95 aa13.87□□□□□ -0.19
SPNS3-204ENST00000575194 TRGV11A0A075B6L2 103 aa13.86□□□□□ -0.19
SPNS3-204ENST00000575194 TRAV12-2A0A075B6T6 113 aa13.86□□□□□ -0.19
SPNS3-204ENST00000575194 IGHV3-16A0A0C4DH30 117 aa13.86□□□□□ -0.19
SPNS3-204ENST00000575194 CCL24O00175 119 aa13.86□□□□□ -0.19
SPNS3-204ENST00000575194 MAJINQ3KP22 176 aa13.86□□□□□ -0.19
SPNS3-204ENST00000575194 POM121L12Q8N7R1 296 aa13.86□□□□□ -0.19
SPNS3-204ENST00000575194 C9orf85Q96MD7 179 aa13.86□□□□□ -0.19
SPNS3-204ENST00000575194 K7EMI3 77 aa13.85□□□□□ -0.19
SPNS3-204ENST00000575194 IGLL1P15814 213 aa13.85□□□□□ -0.19
SPNS3-204ENST00000575194 LAGE3Q14657 143 aa13.85□□□□□ -0.19
SPNS3-204ENST00000575194 SMIM2Q9BVW6 85 aa13.85□□□□□ -0.19
SPNS3-204ENST00000575194 KNCNA6PVL3 124 aa13.84□□□□□ -0.19
SPNS3-204ENST00000575194 HNRNPA3P51991 378 aaKnown RBP13.84□□□□□ -0.19
SPNS3-204ENST00000575194 Q6ZN92 141 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms