RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 ODF3Q96PU9 254 aa10.48□□□□□ -0.73
VPS33B-208ENST00000574755 PEMTQ9UBM1 199 aa10.48□□□□□ -0.73
VPS33B-208ENST00000574755 AGRNO00468 2067 aa10.48□□□□□ -0.73
VPS33B-208ENST00000574755 HIST2H2BDQ6DRA6 164 aa10.48□□□□□ -0.73
VPS33B-208ENST00000574755 NRACQ8N912 160 aa10.48□□□□□ -0.73
VPS33B-208ENST00000574755 OR9G4Q8NGQ1 327 aa10.48□□□□□ -0.73
VPS33B-208ENST00000574755 MRAP2Q96G30 205 aa10.48□□□□□ -0.73
VPS33B-208ENST00000574755 YAE1D1Q9NRH1 226 aa10.48□□□□□ -0.73
VPS33B-208ENST00000574755 TRAV12-2A0A075B6T6 113 aa10.47□□□□□ -0.73
VPS33B-208ENST00000574755 LINC01546A6NGU7 62 aa10.47□□□□□ -0.73
VPS33B-208ENST00000574755 HNRNPA3P51991 378 aaKnown RBP10.47□□□□□ -0.73
VPS33B-208ENST00000574755 C14orf178Q8N769 122 aaPredicted RBP10.47□□□□□ -0.73
VPS33B-208ENST00000574755 FOXC2Q99958 501 aa10.47□□□□□ -0.73
VPS33B-208ENST00000574755 DPH3P1Q9H4G8 78 aa10.47□□□□□ -0.73
VPS33B-208ENST00000574755 ESM1Q9NQ30 184 aa10.47□□□□□ -0.73
VPS33B-208ENST00000574755 NF1P21359 2839 aa10.47□□□□□ -0.73
VPS33B-208ENST00000574755 CD7P09564 240 aa10.47□□□□□ -0.73
VPS33B-208ENST00000574755 KRTAP1-1Q07627 177 aa10.47□□□□□ -0.73
VPS33B-208ENST00000574755 MRPL52Q86TS9 123 aaKnown RBP10.47□□□□□ -0.73
VPS33B-208ENST00000574755 Q8N8P6 123 aa10.47□□□□□ -0.73
VPS33B-208ENST00000574755 IFI27L1Q96BM0 104 aa10.47□□□□□ -0.73
VPS33B-208ENST00000574755 SORL1Q92673 2214 aa10.47□□□□□ -0.73
VPS33B-208ENST00000574755 CD5LO43866 347 aa10.46□□□□□ -0.73
VPS33B-208ENST00000574755 DUSP14O95147 198 aaKnown RBP10.46□□□□□ -0.73
VPS33B-208ENST00000574755 CDKN1BP46527 198 aa10.46□□□□□ -0.73
VPS33B-208ENST00000574755 SPINK13Q1W4C9 94 aa10.46□□□□□ -0.73
VPS33B-208ENST00000574755 AP1S3Q96PC3 154 aa10.46□□□□□ -0.73
VPS33B-208ENST00000574755 ST20Q9HBF5 79 aa10.46□□□□□ -0.73
VPS33B-208ENST00000574755 UNC79Q9P2D8 2635 aa10.46□□□□□ -0.74
VPS33B-208ENST00000574755 FOXI2Q6ZQN5 318 aa10.46□□□□□ -0.74
VPS33B-208ENST00000574755 DLX4Q92988 240 aaPredicted RBP10.46□□□□□ -0.74
VPS33B-208ENST00000574755 C18orf15Q96N68 181 aa10.46□□□□□ -0.74
VPS33B-208ENST00000574755 MUC4Q99102 2169 aa10.46□□□□□ -0.74
VPS33B-208ENST00000574755 IGLV2-18A0A075B6J9 118 aa10.45□□□□□ -0.74
VPS33B-208ENST00000574755 MGPP08493 103 aa10.45□□□□□ -0.74
VPS33B-208ENST00000574755 FCER1GP30273 86 aa10.45□□□□□ -0.74
VPS33B-208ENST00000574755 TSPOP30536 169 aa10.45□□□□□ -0.74
VPS33B-208ENST00000574755 LURAP1LQ8IV03 231 aa10.45□□□□□ -0.74
VPS33B-208ENST00000574755 ACANP16112 2415 aa10.45□□□□□ -0.74
VPS33B-208ENST00000574755 AKAP9Q99996 3911 aa10.45□□□□□ -0.74
VPS33B-208ENST00000574755 PRSS47A8MTI9 375 aa10.45□□□□□ -0.74
VPS33B-208ENST00000574755 BATFQ16520 125 aa10.45□□□□□ -0.74
VPS33B-208ENST00000574755 DEFB125Q8N687 156 aa10.44□□□□□ -0.74
VPS33B-208ENST00000574755 C11orf44Q8N8P7 122 aa10.44□□□□□ -0.74
VPS33B-208ENST00000574755 TMEM158Q8WZ71 300 aa10.44□□□□□ -0.74
VPS33B-208ENST00000574755 GOLT1BQ9Y3E0 138 aa10.44□□□□□ -0.74
VPS33B-208ENST00000574755 LGALS9BQ3B8N2 356 aa10.44□□□□□ -0.74
VPS33B-208ENST00000574755 LGALS9CQ6DKI2 356 aa10.44□□□□□ -0.74
VPS33B-208ENST00000574755 TMEM61Q8N0U2 210 aa10.44□□□□□ -0.74
VPS33B-208ENST00000574755 DYNLRB2Q8TF09 96 aa10.44□□□□□ -0.74
VPS33B-208ENST00000574755 TCAPO15273 167 aa10.43□□□□□ -0.74
VPS33B-208ENST00000574755 NXPH4O95158 308 aa10.43□□□□□ -0.74
VPS33B-208ENST00000574755 DEFB131AP59861 70 aa10.43□□□□□ -0.74
VPS33B-208ENST00000574755 SMIM17P0DL12 118 aa10.43□□□□□ -0.74
VPS33B-208ENST00000574755 LAGE3Q14657 143 aa10.43□□□□□ -0.74
VPS33B-208ENST00000574755 A0A1W2PRX2 142 aa10.42□□□□□ -0.74
VPS33B-208ENST00000574755 KNCNA6PVL3 124 aa10.42□□□□□ -0.74
VPS33B-208ENST00000574755 RASL10AQ92737 203 aa10.42□□□□□ -0.74
VPS33B-208ENST00000574755 SMIM2Q9BVW6 85 aa10.42□□□□□ -0.74
VPS33B-208ENST00000574755 GCN1Q92616 2671 aaKnown RBP10.42□□□□□ -0.74
VPS33B-208ENST00000574755 SUMO2P61956 95 aaKnown RBP10.41□□□□□ -0.74
VPS33B-208ENST00000574755 AMTNQ6UX39 209 aa10.41□□□□□ -0.74
VPS33B-208ENST00000574755 Q8N1Y9 231 aa10.41□□□□□ -0.74
VPS33B-208ENST00000574755 RPL39LQ96EH5 51 aaKnown RBP10.41□□□□□ -0.74
VPS33B-208ENST00000574755 TP73-AS1Q9UF72 201 aa10.41□□□□□ -0.74
VPS33B-208ENST00000574755 IGHV1OR15-1A0A075B7D0 117 aa10.41□□□□□ -0.74
VPS33B-208ENST00000574755 IGHV3-16A0A0C4DH30 117 aa10.41□□□□□ -0.74
VPS33B-208ENST00000574755 NUTF2P61970 127 aaKnown RBP10.41□□□□□ -0.74
VPS33B-208ENST00000574755 MRPS16Q9Y3D3 137 aaKnown RBP10.41□□□□□ -0.74
VPS33B-208ENST00000574755 TRAV2A0A0B4J234 112 aa10.4□□□□□ -0.74
VPS33B-208ENST00000574755 RAX2Q96IS3 184 aa10.4□□□□□ -0.74
VPS33B-208ENST00000574755 MDFICQ9P1T7 246 aa10.4□□□□□ -0.74
VPS33B-208ENST00000574755 CD28P10747 220 aa10.4□□□□□ -0.74
VPS33B-208ENST00000574755 HLA-DRB4P13762 266 aa10.4□□□□□ -0.74
VPS33B-208ENST00000574755 SLC25A34Q6PIV7 304 aa10.4□□□□□ -0.74
VPS33B-208ENST00000574755 C20orf78Q9BR46 151 aa10.4□□□□□ -0.74
VPS33B-208ENST00000574755 JPT2Q9H910 190 aa10.4□□□□□ -0.74
VPS33B-208ENST00000574755 HLA-DRB4X5D2U9 266 aa10.4□□□□□ -0.74
VPS33B-208ENST00000574755 PRSS1P07477 247 aa10.39□□□□□ -0.75
VPS33B-208ENST00000574755 SCGB2A2Q13296 93 aa10.39□□□□□ -0.75
VPS33B-208ENST00000574755 ZNF124Q15973 351 aa10.39□□□□□ -0.75
VPS33B-208ENST00000574755 DEFB114Q30KQ6 69 aa10.39□□□□□ -0.75
VPS33B-208ENST00000574755 C9orf85Q96MD7 179 aa10.39□□□□□ -0.75
VPS33B-208ENST00000574755 KIF25-AS1Q9Y6Z4 181 aa10.39□□□□□ -0.75
VPS33B-208ENST00000574755 A0A087WWL8 130 aa10.39□□□□□ -0.75
VPS33B-208ENST00000574755 NUDT3O95989 172 aa10.39□□□□□ -0.75
VPS33B-208ENST00000574755 PPP1R17O96001 155 aa10.39□□□□□ -0.75
VPS33B-208ENST00000574755 RNASE1P07998 156 aaKnown RBP10.39□□□□□ -0.75
VPS33B-208ENST00000574755 CD300EQ496F6 205 aaPredicted RBP10.39□□□□□ -0.75
VPS33B-208ENST00000574755 MTORP42345 2549 aa10.39□□□□□ -0.75
VPS33B-208ENST00000574755 FASNP49327 2511 aaKnown RBP10.39□□□□□ -0.75
VPS33B-208ENST00000574755 H3BMM0 161 aa10.38□□□□□ -0.75
VPS33B-208ENST00000574755 SYT8Q8NBV8 401 aa10.38□□□□□ -0.75
VPS33B-208ENST00000574755 LINC01006Q8NI28 216 aa10.38□□□□□ -0.75
VPS33B-208ENST00000574755 DKK2Q9UBU2 259 aa10.38□□□□□ -0.75
VPS33B-208ENST00000574755 CCL24O00175 119 aa10.38□□□□□ -0.75
VPS33B-208ENST00000574755 ATP5LO75964 103 aa10.38□□□□□ -0.75
VPS33B-208ENST00000574755 LINC00315P59091 139 aa10.38□□□□□ -0.75
VPS33B-208ENST00000574755 POM121L12Q8N7R1 296 aa10.38□□□□□ -0.75
VPS33B-208ENST00000574755 CITED2Q99967 270 aaPredicted RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms