RNA–Protein interactions for RNA: ENST00000574234.1

TRIM25-208, Transcript of tripartite motif containing 25, humanhuman

TSL 2

Gene TRIM25, Length 471 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-208ENST00000574234 GPR82Q96P67 336 aa3.16□□□□□ -1.9
TRIM25-208ENST00000574234 PBDC1Q9BVG4 233 aa3.16□□□□□ -1.9
TRIM25-208ENST00000574234 ACOT13Q9NPJ3 140 aa3.16□□□□□ -1.9
TRIM25-208ENST00000574234 TRAV26-2A0A0B4J265 109 aa3.15□□□□□ -1.91
TRIM25-208ENST00000574234 IGHV3OR16-9A0A0B4J2B5 98 aa3.15□□□□□ -1.91
TRIM25-208ENST00000574234 TRGV4A0A0C4DH28 118 aa3.15□□□□□ -1.91
TRIM25-208ENST00000574234 EFCAB10A6NFE3 127 aa3.15□□□□□ -1.91
TRIM25-208ENST00000574234 IGHV3-53P01767 116 aa3.15□□□□□ -1.91
TRIM25-208ENST00000574234 C2orf83Q53S99 150 aa3.15□□□□□ -1.91
TRIM25-208ENST00000574234 SPINK9Q5DT21 86 aa3.15□□□□□ -1.91
TRIM25-208ENST00000574234 SDIM1Q6ZPB5 146 aa3.15□□□□□ -1.91
TRIM25-208ENST00000574234 ZNF664Q8N3J9 261 aa3.15□□□□□ -1.91
TRIM25-208ENST00000574234 RNF182Q8N6D2 247 aa3.15□□□□□ -1.91
TRIM25-208ENST00000574234 ZC2HC1AQ96GY0 325 aa3.15□□□□□ -1.91
TRIM25-208ENST00000574234 FAM19A4Q96LR4 140 aa3.15□□□□□ -1.91
TRIM25-208ENST00000574234 RSG1Q9BU20 258 aa3.15□□□□□ -1.91
TRIM25-208ENST00000574234 PDCD10Q9BUL8 212 aa3.15□□□□□ -1.91
TRIM25-208ENST00000574234 SLIRPQ9GZT3 109 aaKnown RBP3.15□□□□□ -1.91
TRIM25-208ENST00000574234 ARV1Q9H2C2 271 aa3.15□□□□□ -1.91
TRIM25-208ENST00000574234 IFT46Q9NQC8 304 aa3.15□□□□□ -1.91
TRIM25-208ENST00000574234 PSORS1C2Q9UIG4 136 aa3.15□□□□□ -1.91
TRIM25-208ENST00000574234 POMPQ9Y244 141 aa3.15□□□□□ -1.91
TRIM25-208ENST00000574234 GGTLC3B5MD39 225 aa3.14□□□□□ -1.91
TRIM25-208ENST00000574234 PITX3O75364 302 aa3.14□□□□□ -1.91
TRIM25-208ENST00000574234 ARL6IP5O75915 188 aa3.14□□□□□ -1.91
TRIM25-208ENST00000574234 IGKV1-39P01597 117 aa3.14□□□□□ -1.91
TRIM25-208ENST00000574234 IGKV1D-39P04432 117 aa3.14□□□□□ -1.91
TRIM25-208ENST00000574234 GIPP09681 153 aaPredicted RBP3.14□□□□□ -1.91
TRIM25-208ENST00000574234 MYL9P24844 172 aa3.14□□□□□ -1.91
TRIM25-208ENST00000574234 PSMA1P25786 263 aaKnown RBP3.14□□□□□ -1.91
TRIM25-208ENST00000574234 GNG2P59768 71 aa3.14□□□□□ -1.91
TRIM25-208ENST00000574234 CACNG7P62955 275 aa3.14□□□□□ -1.91
TRIM25-208ENST00000574234 CDNFQ49AH0 187 aa3.14□□□□□ -1.91
TRIM25-208ENST00000574234 IZUMO2Q6UXV1 221 aa3.14□□□□□ -1.91
TRIM25-208ENST00000574234 PACRGLQ8N7B6 248 aa3.14□□□□□ -1.91
TRIM25-208ENST00000574234 OR10G4Q8NGN3 311 aa3.14□□□□□ -1.91
TRIM25-208ENST00000574234 TYMSOSQ8TAI1 123 aa3.14□□□□□ -1.91
TRIM25-208ENST00000574234 ODF3Q96PU9 254 aa3.14□□□□□ -1.91
TRIM25-208ENST00000574234 CCDC90BQ9GZT6 254 aa3.14□□□□□ -1.91
TRIM25-208ENST00000574234 ENY2Q9NPA8 101 aa3.14□□□□□ -1.91
TRIM25-208ENST00000574234 DIABLOQ9NR28 239 aa3.14□□□□□ -1.91
TRIM25-208ENST00000574234 RSL24D1Q9UHA3 163 aaKnown RBP3.14□□□□□ -1.91
TRIM25-208ENST00000574234 NAGKQ9UJ70 344 aa3.14□□□□□ -1.91
TRIM25-208ENST00000574234 PSG8Q9UQ74 426 aa3.14□□□□□ -1.91
TRIM25-208ENST00000574234 AP4S1Q9Y587 144 aa3.14□□□□□ -1.91
TRIM25-208ENST00000574234 A0A0A6YYH2 397 aa3.13□□□□□ -1.91
TRIM25-208ENST00000574234 TRAV12-3A0A0B4J271 114 aa3.13□□□□□ -1.91
TRIM25-208ENST00000574234 A6NJ64 397 aa3.13□□□□□ -1.91
TRIM25-208ENST00000574234 SNRPGP15A8MWD9 76 aa3.13□□□□□ -1.91
TRIM25-208ENST00000574234 H0Y9J4 135 aa3.13□□□□□ -1.91
TRIM25-208ENST00000574234 GPR31O00270 319 aa3.13□□□□□ -1.91
TRIM25-208ENST00000574234 MYL12BO14950 172 aa3.13□□□□□ -1.91
TRIM25-208ENST00000574234 CFDP00746 253 aaPredicted RBP3.13□□□□□ -1.91
TRIM25-208ENST00000574234 FABP1P07148 127 aa3.13□□□□□ -1.91
TRIM25-208ENST00000574234 PFN1P07737 140 aaKnown RBP3.13□□□□□ -1.91
TRIM25-208ENST00000574234 PTHLHP12272 177 aa3.13□□□□□ -1.91
TRIM25-208ENST00000574234 CXCL3P19876 107 aa3.13□□□□□ -1.91
TRIM25-208ENST00000574234 S100A7P31151 101 aa3.13□□□□□ -1.91
TRIM25-208ENST00000574234 LYZP61626 148 aa3.13□□□□□ -1.91
TRIM25-208ENST00000574234 RPL19P84098 196 aaKnown RBP3.13□□□□□ -1.91
TRIM25-208ENST00000574234 DPPA3Q6W0C5 159 aa3.13□□□□□ -1.91
TRIM25-208ENST00000574234 MRPL52Q86TS9 123 aaKnown RBP3.13□□□□□ -1.91
TRIM25-208ENST00000574234 EIF4E3Q8N5X7 224 aaKnown RBP3.13□□□□□ -1.91
TRIM25-208ENST00000574234 C14orf178Q8N769 122 aaPredicted RBP3.13□□□□□ -1.91
TRIM25-208ENST00000574234 ZFAND1Q8TCF1 268 aa3.13□□□□□ -1.91
TRIM25-208ENST00000574234 ZNF431Q8TF32 576 aaPredicted RBP3.13□□□□□ -1.91
TRIM25-208ENST00000574234 ACY3Q96HD9 319 aa3.13□□□□□ -1.91
TRIM25-208ENST00000574234 ATG5Q9H1Y0 275 aa3.13□□□□□ -1.91
TRIM25-208ENST00000574234 SH3BGRL3Q9H299 93 aa3.13□□□□□ -1.91
TRIM25-208ENST00000574234 PLAC8Q9NZF1 115 aa3.13□□□□□ -1.91
TRIM25-208ENST00000574234 TMEM56-RWDD3S4R434 201 aa3.13□□□□□ -1.91
TRIM25-208ENST00000574234 IGKV2D-24A0A075B6R9 120 aa3.12□□□□□ -1.91
TRIM25-208ENST00000574234 IGKV1D-37A0A075B6S9 117 aa3.12□□□□□ -1.91
TRIM25-208ENST00000574234 A0A087WXM4 84 aa3.12□□□□□ -1.91
TRIM25-208ENST00000574234 LOC100130705A0A1B0GUX0 176 aa3.12□□□□□ -1.91
TRIM25-208ENST00000574234 FAM240AA0A1B0GVK7 77 aa3.12□□□□□ -1.91
TRIM25-208ENST00000574234 ZFP92A6NM28 416 aa3.12□□□□□ -1.91
TRIM25-208ENST00000574234 UPK1BO75841 260 aa3.12□□□□□ -1.91
TRIM25-208ENST00000574234 SEC11BP0C7V7 166 aa3.12□□□□□ -1.91
TRIM25-208ENST00000574234 CDC34P49427 236 aaPredicted RBP3.12□□□□□ -1.91
TRIM25-208ENST00000574234 TAS2R20P59543 309 aa3.12□□□□□ -1.91
TRIM25-208ENST00000574234 CNBPP62633 177 aaKnown RBP3.12□□□□□ -1.91
TRIM25-208ENST00000574234 ZNF90Q03938 601 aa3.12□□□□□ -1.91
TRIM25-208ENST00000574234 LCE1AQ5T7P2 110 aa3.12□□□□□ -1.91
TRIM25-208ENST00000574234 C20orf203Q8NBC4 194 aa3.12□□□□□ -1.91
TRIM25-208ENST00000574234 SPACA4Q8TDM5 124 aa3.12□□□□□ -1.91
TRIM25-208ENST00000574234 TMEM101Q96IK0 257 aa3.12□□□□□ -1.91
TRIM25-208ENST00000574234 C2orf50Q96LR7 162 aa3.12□□□□□ -1.91
TRIM25-208ENST00000574234 SLC25A2Q9BXI2 301 aa3.12□□□□□ -1.91
TRIM25-208ENST00000574234 MRPL16Q9NX20 251 aaKnown RBP3.12□□□□□ -1.91
TRIM25-208ENST00000574234 IGKV1OR2-108A0A075B7D4 117 aa3.11□□□□□ -1.91
TRIM25-208ENST00000574234 IFITM5A6NNB3 132 aa3.11□□□□□ -1.91
TRIM25-208ENST00000574234 ATG12O94817 140 aa3.11□□□□□ -1.91
TRIM25-208ENST00000574234 IGKV1-5P01602 117 aa3.11□□□□□ -1.91
TRIM25-208ENST00000574234 SLC25A5P05141 298 aaKnown RBP3.11□□□□□ -1.91
TRIM25-208ENST00000574234 SFTA3P0C7M3 94 aa3.11□□□□□ -1.91
TRIM25-208ENST00000574234 CRISP2P16562 243 aa3.11□□□□□ -1.91
TRIM25-208ENST00000574234 RPL7P18124 248 aaKnown RBP3.11□□□□□ -1.91
TRIM25-208ENST00000574234 S100GP29377 79 aa3.11□□□□□ -1.91
TRIM25-208ENST00000574234 S100A5P33763 92 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms