RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 SMIM7Q9BQ49 75 aa7.78□□□□□ -1.16
CHD3-216ENST00000573936 MRPL16Q9NX20 251 aaKnown RBP7.78□□□□□ -1.16
CHD3-216ENST00000573936 IGKV3D-20A0A0C4DH25 116 aa7.77□□□□□ -1.17
CHD3-216ENST00000573936 PGPEP1LA6NFU8 196 aa7.77□□□□□ -1.17
CHD3-216ENST00000573936 ZNF727A8MUV8 499 aa7.77□□□□□ -1.17
CHD3-216ENST00000573936 KRBOX1C9JBD0 128 aa7.77□□□□□ -1.17
CHD3-216ENST00000573936 C9JCJ5 164 aa7.77□□□□□ -1.17
CHD3-216ENST00000573936 ADCYAP1P18509 176 aa7.77□□□□□ -1.17
CHD3-216ENST00000573936 GNG4P50150 75 aa7.77□□□□□ -1.17
CHD3-216ENST00000573936 SLAQ13239 276 aa7.77□□□□□ -1.17
CHD3-216ENST00000573936 LINC01559Q495D7 138 aa7.77□□□□□ -1.17
CHD3-216ENST00000573936 DNLZQ5SXM8 178 aa7.77□□□□□ -1.17
CHD3-216ENST00000573936 LGALS9CQ6DKI2 356 aa7.77□□□□□ -1.17
CHD3-216ENST00000573936 NHLRC2Q8NBF2 726 aa7.77□□□□□ -1.17
CHD3-216ENST00000573936 PTH2Q96A98 100 aa7.77□□□□□ -1.17
CHD3-216ENST00000573936 DAZAP1Q96EP5 407 aaKnown RBP7.77□□□□□ -1.17
CHD3-216ENST00000573936 HERC2O95714 4834 aa7.76□□□□□ -1.17
CHD3-216ENST00000573936 OR5I1Q13606 314 aa7.76□□□□□ -1.17
CHD3-216ENST00000573936 FAM74A3Q4VXF1 159 aa7.76□□□□□ -1.17
CHD3-216ENST00000573936 TMEM88Q6PEY1 159 aa7.76□□□□□ -1.17
CHD3-216ENST00000573936 C9orf85Q96MD7 179 aa7.76□□□□□ -1.17
CHD3-216ENST00000573936 TRAV4A0A0B4J268 109 aa7.75□□□□□ -1.17
CHD3-216ENST00000573936 H3BNG1 76 aa7.75□□□□□ -1.17
CHD3-216ENST00000573936 M0R036 132 aa7.75□□□□□ -1.17
CHD3-216ENST00000573936 CIDEAO60543 219 aa7.75□□□□□ -1.17
CHD3-216ENST00000573936 CXCL1P09341 107 aa7.75□□□□□ -1.17
CHD3-216ENST00000573936 MGST1P10620 155 aaKnown RBP7.75□□□□□ -1.17
CHD3-216ENST00000573936 RNASE3P12724 160 aaKnown RBP7.75□□□□□ -1.17
CHD3-216ENST00000573936 PIK3CD-AS1Q5SR53 167 aa7.75□□□□□ -1.17
CHD3-216ENST00000573936 PRR27Q6MZM9 219 aa7.75□□□□□ -1.17
CHD3-216ENST00000573936 OCC1Q8TAD7 63 aa7.75□□□□□ -1.17
CHD3-216ENST00000573936 IL36BQ9NZH7 164 aa7.75□□□□□ -1.17
CHD3-216ENST00000573936 LY96Q9Y6Y9 160 aa7.75□□□□□ -1.17
CHD3-216ENST00000573936 RYR1P21817 5038 aa7.75□□□□□ -1.17
CHD3-216ENST00000573936 F8W036 122 aa7.74□□□□□ -1.17
CHD3-216ENST00000573936 K7EN84 100 aa7.74□□□□□ -1.17
CHD3-216ENST00000573936 P0DMU3 169 aa7.74□□□□□ -1.17
CHD3-216ENST00000573936 FAM231AP0DMU4 169 aa7.74□□□□□ -1.17
CHD3-216ENST00000573936 FAM231CP0DMU5 169 aa7.74□□□□□ -1.17
CHD3-216ENST00000573936 TMEM241Q24JQ0 296 aa7.74□□□□□ -1.17
CHD3-216ENST00000573936 ZNF876PQ49A33 203 aa7.74□□□□□ -1.17
CHD3-216ENST00000573936 C10orf91Q5T1B1 145 aa7.74□□□□□ -1.17
CHD3-216ENST00000573936 LINC01551Q86U37 167 aa7.74□□□□□ -1.17
CHD3-216ENST00000573936 SYT8Q8NBV8 401 aa7.74□□□□□ -1.17
CHD3-216ENST00000573936 OR4C5Q8NGB2 326 aa7.74□□□□□ -1.17
CHD3-216ENST00000573936 NAT8Q9UHE5 227 aa7.74□□□□□ -1.17
CHD3-216ENST00000573936 PCLOQ9Y6V0 5065 aa7.74□□□□□ -1.17
CHD3-216ENST00000573936 TRAV26-1A0A087WT03 109 aa7.73□□□□□ -1.17
CHD3-216ENST00000573936 TRGV4A0A0C4DH28 118 aa7.73□□□□□ -1.17
CHD3-216ENST00000573936 GRIFINA4D1Z8 144 aa7.73□□□□□ -1.17
CHD3-216ENST00000573936 IGHV3-53P01767 116 aa7.73□□□□□ -1.17
CHD3-216ENST00000573936 ARMS2P0C7Q2 107 aa7.73□□□□□ -1.17
CHD3-216ENST00000573936 MED14OSP0DP75 135 aa7.73□□□□□ -1.17
CHD3-216ENST00000573936 HOXA5P20719 270 aa7.73□□□□□ -1.17
CHD3-216ENST00000573936 RPS20P60866 119 aaKnown RBP7.73□□□□□ -1.17
CHD3-216ENST00000573936 RPL23P62829 140 aaKnown RBP7.73□□□□□ -1.17
CHD3-216ENST00000573936 SEC11CQ9BY50 192 aa7.73□□□□□ -1.17
CHD3-216ENST00000573936 PRO0255Q9UI72 69 aa7.73□□□□□ -1.17
CHD3-216ENST00000573936 HHLA3Q9XRX5 114 aa7.73□□□□□ -1.17
CHD3-216ENST00000573936 TMSB15BA0A087X1C1 80 aa7.72□□□□□ -1.17
CHD3-216ENST00000573936 XKRY2A2RUG3 117 aa7.72□□□□□ -1.17
CHD3-216ENST00000573936 A8MWV9 139 aa7.72□□□□□ -1.17
CHD3-216ENST00000573936 H3BVH4 76 aa7.72□□□□□ -1.17
CHD3-216ENST00000573936 RS1O15537 224 aa7.72□□□□□ -1.17
CHD3-216ENST00000573936 PAX4O43316 350 aa7.72□□□□□ -1.17
CHD3-216ENST00000573936 NUDT3O95989 172 aa7.72□□□□□ -1.17
CHD3-216ENST00000573936 P01737 135 aa7.72□□□□□ -1.17
CHD3-216ENST00000573936 FHL2Q14192 279 aa7.72□□□□□ -1.17
CHD3-216ENST00000573936 ZNF479Q96JC4 524 aa7.72□□□□□ -1.17
CHD3-216ENST00000573936 CARHSP1Q9Y2V2 147 aaKnown RBP7.72□□□□□ -1.17
CHD3-216ENST00000573936 PHLDA3Q9Y5J5 127 aa7.72□□□□□ -1.17
CHD3-216ENST00000573936 DNAH2Q9P225 4427 aa7.71□□□□□ -1.18
CHD3-216ENST00000573936 A0A0J9YY99 117 aa7.71□□□□□ -1.18
CHD3-216ENST00000573936 C19orf71A6NCJ1 209 aa7.71□□□□□ -1.18
CHD3-216ENST00000573936 ADIRFQ15847 76 aa7.71□□□□□ -1.18
CHD3-216ENST00000573936 RNF212Q495C1 297 aa7.71□□□□□ -1.18
CHD3-216ENST00000573936 ZNF575Q86XF7 245 aa7.71□□□□□ -1.18
CHD3-216ENST00000573936 ZFP82Q8N141 532 aa7.71□□□□□ -1.18
CHD3-216ENST00000573936 POM121L12Q8N7R1 296 aa7.71□□□□□ -1.18
CHD3-216ENST00000573936 SCRT2Q9NQ03 307 aa7.71□□□□□ -1.18
CHD3-216ENST00000573936 PKHD1P08F94 4074 aa7.7□□□□□ -1.18
CHD3-216ENST00000573936 CRYBA4P53673 196 aa7.7□□□□□ -1.18
CHD3-216ENST00000573936 RPL19P84098 196 aaKnown RBP7.7□□□□□ -1.18
CHD3-216ENST00000573936 CFAP126Q5VTH2 177 aa7.7□□□□□ -1.18
CHD3-216ENST00000573936 UBE2DNLQ8IWF7 75 aa7.7□□□□□ -1.18
CHD3-216ENST00000573936 OR2D3Q8NGH3 330 aa7.7□□□□□ -1.18
CHD3-216ENST00000573936 ISOC2Q96AB3 205 aa7.7□□□□□ -1.18
CHD3-216ENST00000573936 RNASE7Q9H1E1 156 aaKnown RBP7.7□□□□□ -1.18
CHD3-216ENST00000573936 FAT2Q9NYQ8 4349 aa7.7□□□□□ -1.18
CHD3-216ENST00000573936 SNAI2O43623 268 aa7.69□□□□□ -1.18
CHD3-216ENST00000573936 OR5AL1P0C617 328 aa7.69□□□□□ -1.18
CHD3-216ENST00000573936 CCL18P55774 89 aa7.69□□□□□ -1.18
CHD3-216ENST00000573936 FAM3BP58499 235 aaPredicted RBP7.69□□□□□ -1.18
CHD3-216ENST00000573936 PNRC1Q12796 327 aaPredicted RBP7.69□□□□□ -1.18
CHD3-216ENST00000573936 DMRTA1Q5VZB9 504 aa7.69□□□□□ -1.18
CHD3-216ENST00000573936 ZFP2Q6ZN57 461 aa7.69□□□□□ -1.18
CHD3-216ENST00000573936 FAM231DQ6ZW35 169 aa7.69□□□□□ -1.18
CHD3-216ENST00000573936 NUDT10Q8NFP7 164 aa7.69□□□□□ -1.18
CHD3-216ENST00000573936 NUDT11Q96G61 164 aa7.69□□□□□ -1.18
CHD3-216ENST00000573936 VSIG2Q96IQ7 327 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms