RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 IGHV3-11P01762 117 aa14.38□□□□□ -0.11
SCARF1-206ENST00000573852 RNASE3P12724 160 aaKnown RBP14.38□□□□□ -0.11
SCARF1-206ENST00000573852 AMTNQ6UX39 209 aa14.38□□□□□ -0.11
SCARF1-206ENST00000573852 PRSS29PA6NIE9 313 aa14.38□□□□□ -0.11
SCARF1-206ENST00000573852 LGALS1P09382 135 aaKnown RBP14.38□□□□□ -0.11
SCARF1-206ENST00000573852 CYSLTR1Q9Y271 337 aa14.38□□□□□ -0.11
SCARF1-206ENST00000573852 SPTAN1Q13813 2472 aaKnown RBP14.38□□□□□ -0.11
SCARF1-206ENST00000573852 MUC4Q99102 2169 aa14.38□□□□□ -0.11
SCARF1-206ENST00000573852 LINC01619G3V211 115 aa14.38□□□□□ -0.11
SCARF1-206ENST00000573852 RRN3P1Q2M238 152 aa14.38□□□□□ -0.11
SCARF1-206ENST00000573852 F8W1H4 67 aa14.37□□□□□ -0.11
SCARF1-206ENST00000573852 SPANXB1Q9NS25 103 aaPredicted RBP14.37□□□□□ -0.11
SCARF1-206ENST00000573852 A0A1B0GWB2 263 aa14.37□□□□□ -0.11
SCARF1-206ENST00000573852 UCNP55089 124 aa14.37□□□□□ -0.11
SCARF1-206ENST00000573852 PRADC1Q9BSG0 188 aa14.37□□□□□ -0.11
SCARF1-206ENST00000573852 IGHV1-69DA0A0B4J2H0 117 aa14.36□□□□□ -0.11
SCARF1-206ENST00000573852 IGHV1-69P01742 117 aa14.36□□□□□ -0.11
SCARF1-206ENST00000573852 MED14OSP0DP75 135 aa14.36□□□□□ -0.11
SCARF1-206ENST00000573852 LY6EQ16553 131 aa14.35□□□□□ -0.11
SCARF1-206ENST00000573852 APRG1Q8IVJ8 170 aa14.35□□□□□ -0.11
SCARF1-206ENST00000573852 SAMD13Q5VXD3 122 aa14.35□□□□□ -0.11
SCARF1-206ENST00000573852 LCNL1Q6ZST4 164 aa14.35□□□□□ -0.11
SCARF1-206ENST00000573852 SH2D6Q7Z4S9 175 aa14.34□□□□□ -0.11
SCARF1-206ENST00000573852 MTURNQ8N3F0 131 aa14.34□□□□□ -0.11
SCARF1-206ENST00000573852 DEFB104AQ8WTQ1 72 aa14.34□□□□□ -0.11
SCARF1-206ENST00000573852 DUSP14O95147 198 aaKnown RBP14.34□□□□□ -0.11
SCARF1-206ENST00000573852 LINC00315P59091 139 aa14.34□□□□□ -0.11
SCARF1-206ENST00000573852 CRYGDP07320 174 aa14.33□□□□□ -0.12
SCARF1-206ENST00000573852 MORN3Q6PF18 240 aaPredicted RBP14.33□□□□□ -0.12
SCARF1-206ENST00000573852 KIF25-AS1Q9Y6Z4 181 aa14.33□□□□□ -0.12
SCARF1-206ENST00000573852 SRD5A1P18405 259 aa14.33□□□□□ -0.12
SCARF1-206ENST00000573852 PLEKHB2Q96CS7 222 aa14.33□□□□□ -0.12
SCARF1-206ENST00000573852 RHPN1-AS1Q9BWJ2 59 aa14.33□□□□□ -0.12
SCARF1-206ENST00000573852 GTSF1LQ9H1H1 148 aa14.33□□□□□ -0.12
SCARF1-206ENST00000573852 ZNF815PA8K554 130 aa14.32□□□□□ -0.12
SCARF1-206ENST00000573852 IGHV4-39P01824 125 aa14.32□□□□□ -0.12
SCARF1-206ENST00000573852 ETDBQ3ZM63 59 aa14.32□□□□□ -0.12
SCARF1-206ENST00000573852 POM121L12Q8N7R1 296 aa14.32□□□□□ -0.12
SCARF1-206ENST00000573852 JPT2Q9H910 190 aa14.32□□□□□ -0.12
SCARF1-206ENST00000573852 C19orf84I3L1E1 186 aa14.32□□□□□ -0.12
SCARF1-206ENST00000573852 HOXA3O43365 443 aaPredicted RBP14.32□□□□□ -0.12
SCARF1-206ENST00000573852 TSHBP01222 138 aa14.32□□□□□ -0.12
SCARF1-206ENST00000573852 PRO0461Q9UI25 63 aa14.32□□□□□ -0.12
SCARF1-206ENST00000573852 PF4V1P10720 104 aa14.31□□□□□ -0.12
SCARF1-206ENST00000573852 COX6B1P14854 86 aa14.31□□□□□ -0.12
SCARF1-206ENST00000573852 SCGB2A2Q13296 93 aa14.31□□□□□ -0.12
SCARF1-206ENST00000573852 GAGE13Q4V321 117 aa14.31□□□□□ -0.12
SCARF1-206ENST00000573852 Q6ZS46 218 aa14.31□□□□□ -0.12
SCARF1-206ENST00000573852 USMG5Q96IX5 58 aa14.31□□□□□ -0.12
SCARF1-206ENST00000573852 NXPH4O95158 308 aa14.31□□□□□ -0.12
SCARF1-206ENST00000573852 EDN2P20800 178 aa14.31□□□□□ -0.12
SCARF1-206ENST00000573852 KLHL30-AS1Q8NEE0 82 aa14.31□□□□□ -0.12
SCARF1-206ENST00000573852 IGHG2P01859 326 aa14.3□□□□□ -0.12
SCARF1-206ENST00000573852 IGHV4-38-2P0DP08 117 aa14.3□□□□□ -0.12
SCARF1-206ENST00000573852 CD300EQ496F6 205 aaPredicted RBP14.3□□□□□ -0.12
SCARF1-206ENST00000573852 TSSC4Q9Y5U2 329 aaPredicted RBP14.3□□□□□ -0.12
SCARF1-206ENST00000573852 PPP1R17O96001 155 aa14.3□□□□□ -0.12
SCARF1-206ENST00000573852 EMP1P54849 157 aa14.3□□□□□ -0.12
SCARF1-206ENST00000573852 BLCAPP62952 87 aa14.3□□□□□ -0.12
SCARF1-206ENST00000573852 SMAGPQ0VAQ4 97 aa14.3□□□□□ -0.12
SCARF1-206ENST00000573852 WFDC12Q8WWY7 111 aa14.3□□□□□ -0.12
SCARF1-206ENST00000573852 COL12A1Q99715 3063 aa14.3□□□□□ -0.12
SCARF1-206ENST00000573852 AZU1P20160 251 aa14.29□□□□□ -0.12
SCARF1-206ENST00000573852 IGLV4-69A0A075B6H9 119 aa14.29□□□□□ -0.12
SCARF1-206ENST00000573852 TRBV7-9A0A0J9YWB2 115 aa14.29□□□□□ -0.12
SCARF1-206ENST00000573852 C11orf86A6NJI1 115 aa14.29□□□□□ -0.12
SCARF1-206ENST00000573852 SCGB1D4Q6XE38 83 aa14.29□□□□□ -0.12
SCARF1-206ENST00000573852 SPAG8Q99932 426 aaPredicted RBP14.29□□□□□ -0.12
SCARF1-206ENST00000573852 PGPEP1Q9NXJ5 209 aa14.29□□□□□ -0.12
SCARF1-206ENST00000573852 TP53TG1Q9Y2A0 90 aa14.29□□□□□ -0.12
SCARF1-206ENST00000573852 IGHV4OR15-8A0A075B7B6 117 aa14.28□□□□□ -0.12
SCARF1-206ENST00000573852 A0A087WW49 117 aa14.28□□□□□ -0.12
SCARF1-206ENST00000573852 IGHV4-61A0A0C4DH41 118 aa14.28□□□□□ -0.12
SCARF1-206ENST00000573852 KLLNB2CW77 178 aa14.28□□□□□ -0.12
SCARF1-206ENST00000573852 H3BUX3 64 aa14.28□□□□□ -0.12
SCARF1-206ENST00000573852 MAP1AP78559 2803 aaPredicted RBP14.28□□□□□ -0.12
SCARF1-206ENST00000573852 IGIPA6NJ69 53 aa14.28□□□□□ -0.12
SCARF1-206ENST00000573852 H3BUA1 57 aa14.28□□□□□ -0.12
SCARF1-206ENST00000573852 BRI3O95415 125 aa14.28□□□□□ -0.12
SCARF1-206ENST00000573852 POLR2KP53803 58 aaKnown RBP14.28□□□□□ -0.12
SCARF1-206ENST00000573852 RPL39P62891 51 aaKnown RBP14.28□□□□□ -0.12
SCARF1-206ENST00000573852 LY6DQ14210 128 aa14.28□□□□□ -0.12
SCARF1-206ENST00000573852 SUMO4Q6EEV6 95 aa14.28□□□□□ -0.12
SCARF1-206ENST00000573852 ZFP2Q6ZN57 461 aa14.28□□□□□ -0.12
SCARF1-206ENST00000573852 A0A087WWL8 130 aa14.27□□□□□ -0.13
SCARF1-206ENST00000573852 GAGE12HA6NDE8 117 aa14.27□□□□□ -0.13
SCARF1-206ENST00000573852 DAZ1Q9NQZ3 744 aaKnown RBP14.27□□□□□ -0.13
SCARF1-206ENST00000573852 MRPL16Q9NX20 251 aaKnown RBP14.27□□□□□ -0.13
SCARF1-206ENST00000573852 A6NDX4 124 aa14.26□□□□□ -0.13
SCARF1-206ENST00000573852 LINC01549A6NIU2 74 aa14.26□□□□□ -0.13
SCARF1-206ENST00000573852 SRSF9Q13242 221 aaKnown RBP eCLIP14.26□□□□□ -0.13
SCARF1-206ENST00000573852 FAM159AQ6UWV7 190 aa14.26□□□□□ -0.13
SCARF1-206ENST00000573852 CLUHP3Q96NS8 147 aa14.26□□□□□ -0.13
SCARF1-206ENST00000573852 INSL3P51460 131 aa14.26□□□□□ -0.13
SCARF1-206ENST00000573852 RPL32P62910 135 aaKnown RBP14.26□□□□□ -0.13
SCARF1-206ENST00000573852 SIGMAR1Q99720 223 aa14.26□□□□□ -0.13
SCARF1-206ENST00000573852 UBE2D1P51668 147 aa14.25□□□□□ -0.13
SCARF1-206ENST00000573852 J3QR89 54 aa14.25□□□□□ -0.13
SCARF1-206ENST00000573852 TRAV12-3A0A0B4J271 114 aa14.24□□□□□ -0.13
SCARF1-206ENST00000573852 IGLV1-40P01703 118 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms