RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 HIST1H2BOP23527 126 aa6.51□□□□□ -1.37
NDE1-207ENST00000573203 HIST1H2BBP33778 126 aa6.51□□□□□ -1.37
NDE1-207ENST00000573203 TCTAP57738 103 aa6.51□□□□□ -1.37
NDE1-207ENST00000573203 HIST1H2BDP58876 126 aa6.51□□□□□ -1.37
NDE1-207ENST00000573203 HIST1H2BCP62807 126 aa6.51□□□□□ -1.37
NDE1-207ENST00000573203 HIST2H2BEQ16778 126 aa6.51□□□□□ -1.37
NDE1-207ENST00000573203 RRN3P1Q2M238 152 aa6.51□□□□□ -1.37
NDE1-207ENST00000573203 C12orf74Q32Q52 190 aa6.51□□□□□ -1.37
NDE1-207ENST00000573203 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.51□□□□□ -1.37
NDE1-207ENST00000573203 WDR73Q6P4I2 378 aa6.51□□□□□ -1.37
NDE1-207ENST00000573203 ATP5L2Q7Z4Y8 100 aa6.51□□□□□ -1.37
NDE1-207ENST00000573203 KRTAP19-1Q8IUB9 90 aa6.51□□□□□ -1.37
NDE1-207ENST00000573203 C1orf158Q8N1D5 194 aa6.51□□□□□ -1.37
NDE1-207ENST00000573203 HIST1H2BHQ93079 126 aa6.51□□□□□ -1.37
NDE1-207ENST00000573203 DAZAP1Q96EP5 407 aaKnown RBP6.51□□□□□ -1.37
NDE1-207ENST00000573203 HIST1H2BNQ99877 126 aa6.51□□□□□ -1.37
NDE1-207ENST00000573203 HIST1H2BMQ99879 126 aa6.51□□□□□ -1.37
NDE1-207ENST00000573203 RNASE7Q9H1E1 156 aaKnown RBP6.51□□□□□ -1.37
NDE1-207ENST00000573203 LENEPQ9Y5L5 61 aa6.51□□□□□ -1.37
NDE1-207ENST00000573203 DEFB131BA0A096LNP1 70 aa6.5□□□□□ -1.37
NDE1-207ENST00000573203 TEX48A0A1B0GUV7 120 aa6.5□□□□□ -1.37
NDE1-207ENST00000573203 TRGC1P0CF51 173 aa6.5□□□□□ -1.37
NDE1-207ENST00000573203 PRB4P10163 310 aaPredicted RBP6.5□□□□□ -1.37
NDE1-207ENST00000573203 SNRPEP62304 92 aaKnown RBP6.5□□□□□ -1.37
NDE1-207ENST00000573203 LGALS9CQ6DKI2 356 aa6.5□□□□□ -1.37
NDE1-207ENST00000573203 FRZBQ92765 325 aa6.5□□□□□ -1.37
NDE1-207ENST00000573203 NAT8BQ9UHF3 227 aa6.5□□□□□ -1.37
NDE1-207ENST00000573203 IGHV4-4A0A075B6R2 117 aa6.49□□□□□ -1.37
NDE1-207ENST00000573203 TRAV12-2A0A075B6T6 113 aa6.49□□□□□ -1.37
NDE1-207ENST00000573203 TRBV7-9A0A0J9YWB2 115 aa6.49□□□□□ -1.37
NDE1-207ENST00000573203 M0R3E3 92 aa6.49□□□□□ -1.37
NDE1-207ENST00000573203 CRXO43186 299 aaPredicted RBP6.49□□□□□ -1.37
NDE1-207ENST00000573203 P01737 135 aa6.49□□□□□ -1.37
NDE1-207ENST00000573203 S100A8P05109 93 aa6.49□□□□□ -1.37
NDE1-207ENST00000573203 FAM222AQ5U5X8 452 aa6.49□□□□□ -1.37
NDE1-207ENST00000573203 C9orf47Q6ZRZ4 202 aa6.49□□□□□ -1.37
NDE1-207ENST00000573203 PRNTQ86SH4 94 aa6.49□□□□□ -1.37
NDE1-207ENST00000573203 ZFP82Q8N141 532 aa6.49□□□□□ -1.37
NDE1-207ENST00000573203 OR10J6PQ8NGY7 276 aa6.49□□□□□ -1.37
NDE1-207ENST00000573203 RPP21Q9H633 154 aaKnown RBP6.49□□□□□ -1.37
NDE1-207ENST00000573203 DKK2Q9UBU2 259 aa6.49□□□□□ -1.37
NDE1-207ENST00000573203 APLNQ9ULZ1 77 aa6.49□□□□□ -1.37
NDE1-207ENST00000573203 TRAPPC1Q9Y5R8 145 aa6.49□□□□□ -1.37
NDE1-207ENST00000573203 TRAV8-1A0A0A6YYK1 113 aa6.48□□□□□ -1.37
NDE1-207ENST00000573203 A0A1B0GW15 77 aa6.48□□□□□ -1.37
NDE1-207ENST00000573203 PRAC2D3DTV9 90 aa6.48□□□□□ -1.37
NDE1-207ENST00000573203 HLA-DQA1P01909 254 aa6.48□□□□□ -1.37
NDE1-207ENST00000573203 CT45A10P0DMU9 189 aa6.48□□□□□ -1.37
NDE1-207ENST00000573203 CDKN1BP46527 198 aa6.48□□□□□ -1.37
NDE1-207ENST00000573203 Q6AWC8 147 aa6.48□□□□□ -1.37
NDE1-207ENST00000573203 TMEM256Q8N2U0 113 aa6.48□□□□□ -1.37
NDE1-207ENST00000573203 LINC00477Q96M19 166 aa6.48□□□□□ -1.37
NDE1-207ENST00000573203 LINC01587Q99440 93 aa6.48□□□□□ -1.37
NDE1-207ENST00000573203 XKRY2A2RUG3 117 aa6.47□□□□□ -1.37
NDE1-207ENST00000573203 PRM2P04554 102 aa6.47□□□□□ -1.37
NDE1-207ENST00000573203 HTN1P15515 57 aa6.47□□□□□ -1.37
NDE1-207ENST00000573203 HTN3P15516 51 aa6.47□□□□□ -1.37
NDE1-207ENST00000573203 TSPOP30536 169 aa6.47□□□□□ -1.37
NDE1-207ENST00000573203 CRIP1P50238 77 aa6.47□□□□□ -1.37
NDE1-207ENST00000573203 RPS20P60866 119 aaKnown RBP6.47□□□□□ -1.37
NDE1-207ENST00000573203 DAD1P61803 113 aa6.47□□□□□ -1.37
NDE1-207ENST00000573203 FABP9Q0Z7S8 132 aa6.47□□□□□ -1.37
NDE1-207ENST00000573203 LCE3BQ5TA77 95 aa6.47□□□□□ -1.37
NDE1-207ENST00000573203 NHLRC2Q8NBF2 726 aa6.47□□□□□ -1.37
NDE1-207ENST00000573203 NUP35Q8NFH5 326 aa6.47□□□□□ -1.37
NDE1-207ENST00000573203 ZC2HC1AQ96GY0 325 aa6.47□□□□□ -1.37
NDE1-207ENST00000573203 NDFIP1Q9BT67 221 aa6.47□□□□□ -1.37
NDE1-207ENST00000573203 NDUFAF3Q9BU61 184 aa6.47□□□□□ -1.37
NDE1-207ENST00000573203 RPH3ALQ9UNE2 315 aa6.47□□□□□ -1.37
NDE1-207ENST00000573203 VPS13DQ5THJ4 4388 aa6.47□□□□□ -1.37
NDE1-207ENST00000573203 A0A1B0GXF2 115 aa6.46□□□□□ -1.38
NDE1-207ENST00000573203 LYRM9A8MSI8 78 aa6.46□□□□□ -1.38
NDE1-207ENST00000573203 FABP5P3A8MUU1 101 aa6.46□□□□□ -1.38
NDE1-207ENST00000573203 HIGD1CA8MV81 97 aa6.46□□□□□ -1.38
NDE1-207ENST00000573203 ZNF138P52744 262 aa6.46□□□□□ -1.38
NDE1-207ENST00000573203 NDUFA6P56556 154 aa6.46□□□□□ -1.38
NDE1-207ENST00000573203 Q0VG73 95 aa6.46□□□□□ -1.38
NDE1-207ENST00000573203 SMUG1Q53HV7 270 aa6.46□□□□□ -1.38
NDE1-207ENST00000573203 FAM162BQ5T6X4 162 aa6.46□□□□□ -1.38
NDE1-207ENST00000573203 PRR27Q6MZM9 219 aa6.46□□□□□ -1.38
NDE1-207ENST00000573203 TMEM136Q6ZRR5 245 aa6.46□□□□□ -1.38
NDE1-207ENST00000573203 GATD1Q8NB37 220 aa6.46□□□□□ -1.38
NDE1-207ENST00000573203 SGK494Q96LW2 274 aa6.46□□□□□ -1.38
NDE1-207ENST00000573203 AGPAT4-IT1Q9H0P7 198 aa6.46□□□□□ -1.38
NDE1-207ENST00000573203 J3KRW8 73 aa6.45□□□□□ -1.38
NDE1-207ENST00000573203 ESDP10768 282 aa6.45□□□□□ -1.38
NDE1-207ENST00000573203 AZU1P20160 251 aa6.45□□□□□ -1.38
NDE1-207ENST00000573203 LEPP41159 167 aa6.45□□□□□ -1.38
NDE1-207ENST00000573203 TMEM78Q5T7P6 136 aa6.45□□□□□ -1.38
NDE1-207ENST00000573203 OR2D3Q8NGH3 330 aa6.45□□□□□ -1.38
NDE1-207ENST00000573203 GTSF1Q8WW33 167 aa6.45□□□□□ -1.38
NDE1-207ENST00000573203 C16orf74Q96GX8 76 aa6.45□□□□□ -1.38
NDE1-207ENST00000573203 PACRGQ96M98 296 aaPredicted RBP6.45□□□□□ -1.38
NDE1-207ENST00000573203 VGLL1Q99990 258 aa6.45□□□□□ -1.38
NDE1-207ENST00000573203 C20orf144Q9BQM9 153 aa6.45□□□□□ -1.38
NDE1-207ENST00000573203 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.45□□□□□ -1.38
NDE1-207ENST00000573203 KMT2AQ03164 3969 aa6.44□□□□□ -1.38
NDE1-207ENST00000573203 IGKV2-40A0A087WW87 121 aaPredicted RBP6.44□□□□□ -1.38
NDE1-207ENST00000573203 SNURFLB1AK76 121 aa6.44□□□□□ -1.38
NDE1-207ENST00000573203 H3BS24 57 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms