RNA–Protein interactions for RNA: ENST00000572438.1

CHRNE-202, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

TSL 5

Gene CHRNE, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-202ENST00000572438 MRPL51Q4U2R6 128 aaKnown RBP15.13■□□□□ 0.01
CHRNE-202ENST00000572438 SMIM15Q7Z3B0 74 aa15.13■□□□□ 0.01
CHRNE-202ENST00000572438 STHQ8IWL8 128 aa15.13■□□□□ 0.01
CHRNE-202ENST00000572438 LINC00518Q8N0U6 118 aa15.13■□□□□ 0.01
CHRNE-202ENST00000572438 FAM110AQ9BQ89 295 aa15.13■□□□□ 0.01
CHRNE-202ENST00000572438 D6R8Y8 96 aa15.12■□□□□ 0.01
CHRNE-202ENST00000572438 RNF185Q96GF1 192 aa15.12■□□□□ 0.01
CHRNE-202ENST00000572438 M0R381 172 aa15.11■□□□□ 0.01
CHRNE-202ENST00000572438 RBMY1A1P0DJD3 496 aaKnown RBP15.11■□□□□ 0.01
CHRNE-202ENST00000572438 RBMY1CP0DJD4 496 aa15.11■□□□□ 0.01
CHRNE-202ENST00000572438 RAB4AP20338 218 aa15.11■□□□□ 0.01
CHRNE-202ENST00000572438 RBMY1FQ15415 496 aaKnown RBP15.11■□□□□ 0.01
CHRNE-202ENST00000572438 ORMDL3Q8N138 153 aa15.11■□□□□ 0.01
CHRNE-202ENST00000572438 IGHV3-16A0A0C4DH30 117 aa15.1■□□□□ 0.01
CHRNE-202ENST00000572438 SPRY2O43597 315 aa15.1■□□□□ 0.01
CHRNE-202ENST00000572438 SMIM6P0DI80 62 aa15.1■□□□□ 0.01
CHRNE-202ENST00000572438 EVI2AP22794 236 aa15.1■□□□□ 0.01
CHRNE-202ENST00000572438 TRPT1Q86TN4 253 aaKnown RBP15.1■□□□□ 0.01
CHRNE-202ENST00000572438 Q8N1Y9 231 aa15.1■□□□□ 0.01
CHRNE-202ENST00000572438 NXPH4O95158 308 aa15.09■□□□□ 0.01
CHRNE-202ENST00000572438 CKS2P33552 79 aa15.09■□□□□ 0.01
CHRNE-202ENST00000572438 INSL3P51460 131 aa15.09■□□□□ 0.01
CHRNE-202ENST00000572438 PRELID3AQ96N28 172 aa15.09■□□□□ 0.01
CHRNE-202ENST00000572438 NIT1Q86X76 327 aa15.08■□□□□ 0.01
CHRNE-202ENST00000572438 C9orf85Q96MD7 179 aa15.08■□□□□ 0.01
CHRNE-202ENST00000572438 SAMD10Q9BYL1 202 aa15.08■□□□□ 0.01
CHRNE-202ENST00000572438 C19orf73Q9NVV2 129 aa15.08■□□□□ 0.01
CHRNE-202ENST00000572438 TENM1Q9UKZ4 2725 aa15.08■□□□□ 0
CHRNE-202ENST00000572438 PPBPP02775 128 aa15.08■□□□□ 0
CHRNE-202ENST00000572438 KRTAP24-1Q3LI83 254 aa15.08■□□□□ 0
CHRNE-202ENST00000572438 RNASEKQ6P5S7 137 aaKnown RBP15.08■□□□□ 0
CHRNE-202ENST00000572438 URB1-AS1Q96HZ7 61 aa15.08■□□□□ 0
CHRNE-202ENST00000572438 TRGV11A0A075B6L2 103 aa15.07■□□□□ 0
CHRNE-202ENST00000572438 INSP01308 110 aa15.07■□□□□ 0
CHRNE-202ENST00000572438 C9orf66Q5T8R8 295 aa15.07■□□□□ 0
CHRNE-202ENST00000572438 C12orf57Q99622 126 aa15.07■□□□□ 0
CHRNE-202ENST00000572438 C20orf144Q9BQM9 153 aa15.07■□□□□ 0
CHRNE-202ENST00000572438 MDFICQ9P1T7 246 aa15.07■□□□□ 0
CHRNE-202ENST00000572438 CBY3A6NI87 242 aa15.06■□□□□ 0
CHRNE-202ENST00000572438 SMKR1H3BMG3 65 aa15.06■□□□□ 0
CHRNE-202ENST00000572438 SPATA3Q8NHX4 192 aa15.06■□□□□ 0
CHRNE-202ENST00000572438 ATRQ13535 2644 aa15.06■□□□□ 0
CHRNE-202ENST00000572438 HSBP1O75506 76 aa15.06■□□□□ 0
CHRNE-202ENST00000572438 NCR2O95944 276 aa15.06■□□□□ 0
CHRNE-202ENST00000572438 PRIMA1Q86XR5 153 aa15.06■□□□□ 0
CHRNE-202ENST00000572438 CHCHD1Q96BP2 118 aaKnown RBP15.06■□□□□ 0
CHRNE-202ENST00000572438 PMCHP20382 165 aa15.05■□□□□ -0
CHRNE-202ENST00000572438 AMTP48728 403 aa15.05■□□□□ -0
CHRNE-202ENST00000572438 NUTF2P61970 127 aaKnown RBP15.05■□□□□ -0
CHRNE-202ENST00000572438 PYY3Q5JQD4 70 aa15.05■□□□□ -0
CHRNE-202ENST00000572438 AP1S3Q96PC3 154 aa15.05■□□□□ -0
CHRNE-202ENST00000572438 LINC00614P0C842 121 aa15.04■□□□□ -0
CHRNE-202ENST00000572438 LINC00467Q9BRT7 94 aa15.04■□□□□ -0
CHRNE-202ENST00000572438 WFDC10AQ9H1F0 79 aa15.04■□□□□ -0
CHRNE-202ENST00000572438 LAMTOR2Q9Y2Q5 125 aa15.04■□□□□ -0
CHRNE-202ENST00000572438 NPYP01303 97 aa15.03■□□□□ -0
CHRNE-202ENST00000572438 DPH3P1Q9H4G8 78 aa15.03■□□□□ -0
CHRNE-202ENST00000572438 XCL2Q9UBD3 114 aa15.03■□□□□ -0
CHRNE-202ENST00000572438 FAM19A2Q8N3H0 131 aa15.03■□□□□ -0
CHRNE-202ENST00000572438 C14orf178Q8N769 122 aaPredicted RBP15.03■□□□□ -0
CHRNE-202ENST00000572438 LINC01587Q99440 93 aa15.03■□□□□ -0
CHRNE-202ENST00000572438 HTN1P15515 57 aa15.02■□□□□ -0
CHRNE-202ENST00000572438 GAS8-AS1O95177 125 aa15.01□□□□□ -0.01
CHRNE-202ENST00000572438 SYT8Q8NBV8 401 aa15.01□□□□□ -0.01
CHRNE-202ENST00000572438 PRSS3P2Q8NHM4 247 aa15.01□□□□□ -0.01
CHRNE-202ENST00000572438 MRAP2Q96G30 205 aa15.01□□□□□ -0.01
CHRNE-202ENST00000572438 MCRIP2Q9BUT9 160 aaKnown RBP15.01□□□□□ -0.01
CHRNE-202ENST00000572438 Q6ZWC4 215 aa15.01□□□□□ -0.01
CHRNE-202ENST00000572438 TNFRSF6BO95407 300 aa15□□□□□ -0.01
CHRNE-202ENST00000572438 JOSD1Q15040 202 aaPredicted RBP15□□□□□ -0.01
CHRNE-202ENST00000572438 WFDC9Q8NEX5 89 aa15□□□□□ -0.01
CHRNE-202ENST00000572438 ZNF747Q9BV97 191 aa15□□□□□ -0.01
CHRNE-202ENST00000572438 TRAV26-2A0A0B4J265 109 aa14.99□□□□□ -0.01
CHRNE-202ENST00000572438 LOC389332A0A1B0GUA5 103 aa14.99□□□□□ -0.01
CHRNE-202ENST00000572438 GATA1P15976 413 aaPredicted RBP14.99□□□□□ -0.01
CHRNE-202ENST00000572438 IFI27P40305 119 aaPredicted RBP14.99□□□□□ -0.01
CHRNE-202ENST00000572438 FA2HQ7L5A8 372 aa14.99□□□□□ -0.01
CHRNE-202ENST00000572438 KIF25-AS1Q9Y6Z4 181 aa14.99□□□□□ -0.01
CHRNE-202ENST00000572438 GTSCR1Q86UQ5 136 aa14.99□□□□□ -0.01
CHRNE-202ENST00000572438 C1orf158Q8N1D5 194 aa14.99□□□□□ -0.01
CHRNE-202ENST00000572438 MAP1LC3AQ9H492 121 aa14.99□□□□□ -0.01
CHRNE-202ENST00000572438 AP5S1Q9NUS5 200 aa14.99□□□□□ -0.01
CHRNE-202ENST00000572438 MUC4Q99102 2169 aa14.99□□□□□ -0.01
CHRNE-202ENST00000572438 SMIM17P0DL12 118 aa14.98□□□□□ -0.01
CHRNE-202ENST00000572438 ZNF415Q09FC8 603 aa14.98□□□□□ -0.01
CHRNE-202ENST00000572438 POM121L12Q8N7R1 296 aa14.98□□□□□ -0.01
CHRNE-202ENST00000572438 TMEM208Q9BTX3 173 aa14.98□□□□□ -0.01
CHRNE-202ENST00000572438 VWFP04275 2813 aa14.98□□□□□ -0.01
CHRNE-202ENST00000572438 IGHV1-24A0A0C4DH33 117 aa14.97□□□□□ -0.01
CHRNE-202ENST00000572438 PRM2P04554 102 aa14.97□□□□□ -0.01
CHRNE-202ENST00000572438 MGPP08493 103 aa14.97□□□□□ -0.01
CHRNE-202ENST00000572438 GIG44P09565 113 aaPredicted RBP14.97□□□□□ -0.01
CHRNE-202ENST00000572438 RPL35AP18077 110 aaKnown RBP14.97□□□□□ -0.01
CHRNE-202ENST00000572438 DEFB125Q8N687 156 aa14.97□□□□□ -0.01
CHRNE-202ENST00000572438 NRACQ8N912 160 aa14.97□□□□□ -0.01
CHRNE-202ENST00000572438 JPT2Q9H910 190 aa14.97□□□□□ -0.01
CHRNE-202ENST00000572438 GSN-AS1Q9NRJ2 163 aa14.97□□□□□ -0.01
CHRNE-202ENST00000572438 LINC00315P59091 139 aa14.96□□□□□ -0.01
CHRNE-202ENST00000572438 ZNF876PQ49A33 203 aa14.96□□□□□ -0.01
CHRNE-202ENST00000572438 MORN3Q6PF18 240 aaPredicted RBP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms