RNA–Protein interactions for RNA: ENST00000572019.1

NUP88-203, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-203ENST00000572019 WFDC1Q9HC57 220 aa12.49□□□□□ -0.41
NUP88-203ENST00000572019 BOLA1Q9Y3E2 137 aa12.49□□□□□ -0.41
NUP88-203ENST00000572019 FAM240BA0A1B0GVZ2 78 aa12.48□□□□□ -0.41
NUP88-203ENST00000572019 IGLV2-8P01709 118 aa12.48□□□□□ -0.41
NUP88-203ENST00000572019 RAB2AP61019 212 aa12.48□□□□□ -0.41
NUP88-203ENST00000572019 OR2T35Q8NGX2 323 aa12.48□□□□□ -0.41
NUP88-203ENST00000572019 CIDEAO60543 219 aa12.47□□□□□ -0.41
NUP88-203ENST00000572019 GCGP01275 180 aa12.47□□□□□ -0.41
NUP88-203ENST00000572019 IGLV2-11P01706 119 aa12.47□□□□□ -0.41
NUP88-203ENST00000572019 HSPB11Q9Y547 144 aa12.47□□□□□ -0.41
NUP88-203ENST00000572019 IGKV2D-24A0A075B6R9 120 aa12.46□□□□□ -0.41
NUP88-203ENST00000572019 GGTLC3B5MD39 225 aa12.46□□□□□ -0.41
NUP88-203ENST00000572019 H2BFSP57053 126 aa12.46□□□□□ -0.41
NUP88-203ENST00000572019 UFSP1Q6NVU6 142 aa12.46□□□□□ -0.41
NUP88-203ENST00000572019 PTH2Q96A98 100 aa12.46□□□□□ -0.41
NUP88-203ENST00000572019 DAZAP1Q96EP5 407 aaKnown RBP12.46□□□□□ -0.41
NUP88-203ENST00000572019 LINC00479Q96M42 142 aa12.46□□□□□ -0.41
NUP88-203ENST00000572019 KLK12Q9UKR0 248 aa12.46□□□□□ -0.41
NUP88-203ENST00000572019 FAM74A1Q5RGS3 127 aa12.45□□□□□ -0.42
NUP88-203ENST00000572019 NIT1Q86X76 327 aa12.45□□□□□ -0.42
NUP88-203ENST00000572019 CYB561D1Q8N8Q1 229 aa12.45□□□□□ -0.42
NUP88-203ENST00000572019 Q8N976 141 aa12.45□□□□□ -0.42
NUP88-203ENST00000572019 IGKV3D-20A0A0C4DH25 116 aa12.44□□□□□ -0.42
NUP88-203ENST00000572019 TAAR5O14804 337 aa12.44□□□□□ -0.42
NUP88-203ENST00000572019 TCRAP04437 139 aa12.44□□□□□ -0.42
NUP88-203ENST00000572019 PQLC2Q6ZP29 291 aa12.44□□□□□ -0.42
NUP88-203ENST00000572019 ARL6IP6Q8N6S5 226 aa12.44□□□□□ -0.42
NUP88-203ENST00000572019 PPP1R1CQ8WVI7 109 aa12.44□□□□□ -0.42
NUP88-203ENST00000572019 PSG8Q9UQ74 426 aa12.44□□□□□ -0.42
NUP88-203ENST00000572019 ARL14EPLP0DKL9 152 aa12.43□□□□□ -0.42
NUP88-203ENST00000572019 TOR2AQ5JU69 321 aa12.43□□□□□ -0.42
NUP88-203ENST00000572019 SCGB1C1Q8TD33 95 aa12.43□□□□□ -0.42
NUP88-203ENST00000572019 MT1HL1P0DM35 61 aa12.42□□□□□ -0.42
NUP88-203ENST00000572019 PRNTQ86SH4 94 aa12.42□□□□□ -0.42
NUP88-203ENST00000572019 UBE2WQ96B02 151 aa12.42□□□□□ -0.42
NUP88-203ENST00000572019 NDFIP1Q9BT67 221 aa12.42□□□□□ -0.42
NUP88-203ENST00000572019 RPL37AP61513 92 aaKnown RBP12.41□□□□□ -0.42
NUP88-203ENST00000572019 ASAH1Q13510 395 aa12.41□□□□□ -0.42
NUP88-203ENST00000572019 LGALSLQ3ZCW2 172 aaPredicted RBP12.41□□□□□ -0.42
NUP88-203ENST00000572019 ZFP2Q6ZN57 461 aa12.41□□□□□ -0.42
NUP88-203ENST00000572019 CCDC32Q9BV29 185 aa12.41□□□□□ -0.42
NUP88-203ENST00000572019 COX11Q9Y6N1 276 aa12.41□□□□□ -0.42
NUP88-203ENST00000572019 A0A1W2PPV4 95 aa12.4□□□□□ -0.42
NUP88-203ENST00000572019 MPC2O95563 127 aa12.4□□□□□ -0.42
NUP88-203ENST00000572019 ACOT6Q3I5F7 207 aaPredicted RBP12.4□□□□□ -0.42
NUP88-203ENST00000572019 C5orf17Q8NAS9 161 aa12.4□□□□□ -0.42
NUP88-203ENST00000572019 A8MWV9 139 aa12.39□□□□□ -0.43
NUP88-203ENST00000572019 RPL12P30050 165 aaKnown RBP12.39□□□□□ -0.43
NUP88-203ENST00000572019 FLI1Q01543 452 aaPredicted RBP12.39□□□□□ -0.43
NUP88-203ENST00000572019 SMUG1Q53HV7 270 aa12.39□□□□□ -0.43
NUP88-203ENST00000572019 DMRTA1Q5VZB9 504 aa12.39□□□□□ -0.43
NUP88-203ENST00000572019 ATRAIDQ6UW56 229 aa12.39□□□□□ -0.43
NUP88-203ENST00000572019 OR10G9Q8NGN4 311 aa12.39□□□□□ -0.43
NUP88-203ENST00000572019 OR10G7Q8NGN6 311 aa12.39□□□□□ -0.43
NUP88-203ENST00000572019 RMI2Q96E14 147 aa12.39□□□□□ -0.43
NUP88-203ENST00000572019 A0A087WWC5 75 aa12.38□□□□□ -0.43
NUP88-203ENST00000572019 PANO1I0J062 215 aa12.38□□□□□ -0.43
NUP88-203ENST00000572019 MZT2BQ6NZ67 158 aa12.38□□□□□ -0.43
NUP88-203ENST00000572019 TRAV34A0A0B4J273 112 aa12.37□□□□□ -0.43
NUP88-203ENST00000572019 H3BVH4 76 aa12.37□□□□□ -0.43
NUP88-203ENST00000572019 STAG3L2P0CL84 134 aa12.37□□□□□ -0.43
NUP88-203ENST00000572019 STAG3L3P0CL85 134 aa12.37□□□□□ -0.43
NUP88-203ENST00000572019 SUN5Q8TC36 379 aa12.37□□□□□ -0.43
NUP88-203ENST00000572019 URGCP-MRPS24S4R325 110 aa12.37□□□□□ -0.43
NUP88-203ENST00000572019 SERTM2A0A1B0GWG4 89 aa12.36□□□□□ -0.43
NUP88-203ENST00000572019 GCHFRP30047 84 aa12.36□□□□□ -0.43
NUP88-203ENST00000572019 SUMO1P63165 101 aaKnown RBP12.36□□□□□ -0.43
NUP88-203ENST00000572019 CYCSP99999 105 aaKnown RBP12.36□□□□□ -0.43
NUP88-203ENST00000572019 ENHOQ6UWT2 76 aa12.36□□□□□ -0.43
NUP88-203ENST00000572019 EPDR1Q9UM22 224 aa12.36□□□□□ -0.43
NUP88-203ENST00000572019 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.36□□□□□ -0.43
NUP88-203ENST00000572019 A0A087WWL8 130 aa12.35□□□□□ -0.43
NUP88-203ENST00000572019 S100A4P26447 101 aaKnown RBP12.35□□□□□ -0.43
NUP88-203ENST00000572019 CDC34P49427 236 aaPredicted RBP12.35□□□□□ -0.43
NUP88-203ENST00000572019 FGF8P55075 233 aaPredicted RBP12.35□□□□□ -0.43
NUP88-203ENST00000572019 IFITM3Q01628 133 aa12.35□□□□□ -0.43
NUP88-203ENST00000572019 FAM74A4Q5TZK3 123 aa12.35□□□□□ -0.43
NUP88-203ENST00000572019 RAB24Q969Q5 203 aa12.35□□□□□ -0.43
NUP88-203ENST00000572019 ASIPP42127 132 aa12.34□□□□□ -0.43
NUP88-203ENST00000572019 ZFP69Q49AA0 526 aa12.34□□□□□ -0.43
NUP88-203ENST00000572019 PIK3CD-AS1Q5SR53 167 aa12.34□□□□□ -0.43
NUP88-203ENST00000572019 ENKURQ8TC29 256 aa12.34□□□□□ -0.43
NUP88-203ENST00000572019 SH3BGRL3Q9H299 93 aa12.34□□□□□ -0.43
NUP88-203ENST00000572019 IL36BQ9NZH7 164 aa12.34□□□□□ -0.43
NUP88-203ENST00000572019 CRIP1P50238 77 aa12.33□□□□□ -0.44
NUP88-203ENST00000572019 OR2G3Q8NGZ4 309 aa12.33□□□□□ -0.44
NUP88-203ENST00000572019 ARL2-SNX15V9GYD0 113 aa12.33□□□□□ -0.44
NUP88-203ENST00000572019 A0A087WX48 190 aa12.32□□□□□ -0.44
NUP88-203ENST00000572019 GRIFINA4D1Z8 144 aa12.32□□□□□ -0.44
NUP88-203ENST00000572019 USP17L23D6RBM5 183 aa12.32□□□□□ -0.44
NUP88-203ENST00000572019 INMT-MINDY4F8WBC2 141 aa12.32□□□□□ -0.44
NUP88-203ENST00000572019 K7EQM0 130 aa12.32□□□□□ -0.44
NUP88-203ENST00000572019 PRSS1P07477 247 aa12.32□□□□□ -0.44
NUP88-203ENST00000572019 LRP2P98164 4655 aa12.31□□□□□ -0.44
NUP88-203ENST00000572019 M0R036 132 aa12.31□□□□□ -0.44
NUP88-203ENST00000572019 ARMS2P0C7Q2 107 aa12.31□□□□□ -0.44
NUP88-203ENST00000572019 HSD17B11Q8NBQ5 300 aa12.31□□□□□ -0.44
NUP88-203ENST00000572019 TNXBP22105 4242 aa12.31□□□□□ -0.44
NUP88-203ENST00000572019 B4DEV8 164 aa12.3□□□□□ -0.44
NUP88-203ENST00000572019 KRBOX1C9JBD0 128 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms