RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 FAM223BA6NKX1 122 aa12.38□□□□□ -0.43
RAB40B-206ENST00000571995 TCTEX1D4Q5JR98 221 aa12.38□□□□□ -0.43
RAB40B-206ENST00000571995 FAM223AQ8IWN6 122 aa12.38□□□□□ -0.43
RAB40B-206ENST00000571995 Q8N6K4 173 aa12.38□□□□□ -0.43
RAB40B-206ENST00000571995 F8P00451 2351 aa12.38□□□□□ -0.43
RAB40B-206ENST00000571995 A0A1B0GW15 77 aa12.38□□□□□ -0.43
RAB40B-206ENST00000571995 RNASE13Q5GAN3 156 aaKnown RBP12.38□□□□□ -0.43
RAB40B-206ENST00000571995 APRG1Q8IVJ8 170 aa12.38□□□□□ -0.43
RAB40B-206ENST00000571995 CSTL1Q9H114 145 aa12.38□□□□□ -0.43
RAB40B-206ENST00000571995 ST20Q9HBF5 79 aa12.38□□□□□ -0.43
RAB40B-206ENST00000571995 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.38□□□□□ -0.43
RAB40B-206ENST00000571995 NHP2Q9NX24 153 aaKnown RBP12.38□□□□□ -0.43
RAB40B-206ENST00000571995 K7EP13 123 aa12.37□□□□□ -0.43
RAB40B-206ENST00000571995 PRR9Q5T870 116 aa12.37□□□□□ -0.43
RAB40B-206ENST00000571995 GAGE10A6NGK3 116 aa12.37□□□□□ -0.43
RAB40B-206ENST00000571995 PRSS2P07478 247 aa12.37□□□□□ -0.43
RAB40B-206ENST00000571995 OR1N2Q8NGR9 330 aa12.37□□□□□ -0.43
RAB40B-206ENST00000571995 TMEM8BA6NDV4 472 aa12.37□□□□□ -0.43
RAB40B-206ENST00000571995 C18orf65Q6ZTR6 163 aa12.37□□□□□ -0.43
RAB40B-206ENST00000571995 USMG5Q96IX5 58 aa12.37□□□□□ -0.43
RAB40B-206ENST00000571995 MRPS12O15235 138 aaKnown RBP12.37□□□□□ -0.43
RAB40B-206ENST00000571995 PHLDA1Q8WV24 401 aaPredicted RBP12.37□□□□□ -0.43
RAB40B-206ENST00000571995 KIR2DL4Q99706 377 aa12.37□□□□□ -0.43
RAB40B-206ENST00000571995 ZNF876PQ49A33 203 aa12.36□□□□□ -0.43
RAB40B-206ENST00000571995 MRPL35Q9NZE8 188 aaKnown RBP12.36□□□□□ -0.43
RAB40B-206ENST00000571995 OVOL1O14753 267 aa12.36□□□□□ -0.43
RAB40B-206ENST00000571995 HOXD3P31249 432 aaPredicted RBP12.36□□□□□ -0.43
RAB40B-206ENST00000571995 IGHV7-4-1A0A0J9YVY3 117 aa12.35□□□□□ -0.43
RAB40B-206ENST00000571995 CLPSL1A2RUU4 121 aa12.35□□□□□ -0.43
RAB40B-206ENST00000571995 CFHR3Q02985 330 aa12.35□□□□□ -0.43
RAB40B-206ENST00000571995 IGHV3-38A0A0C4DH36 116 aa12.35□□□□□ -0.43
RAB40B-206ENST00000571995 LOC107984156A0A0G2JMH3 177 aa12.35□□□□□ -0.43
RAB40B-206ENST00000571995 NDUFS8O00217 210 aa12.35□□□□□ -0.43
RAB40B-206ENST00000571995 NDUFA4O00483 81 aa12.35□□□□□ -0.43
RAB40B-206ENST00000571995 APOMO95445 188 aa12.35□□□□□ -0.43
RAB40B-206ENST00000571995 RPL35AP18077 110 aaKnown RBP12.35□□□□□ -0.43
RAB40B-206ENST00000571995 Q1RN00 199 aa12.35□□□□□ -0.43
RAB40B-206ENST00000571995 ARL17AQ8IVW1 177 aa12.35□□□□□ -0.43
RAB40B-206ENST00000571995 MS4A6AQ9H2W1 248 aa12.35□□□□□ -0.43
RAB40B-206ENST00000571995 MUC4Q99102 2169 aa12.35□□□□□ -0.43
RAB40B-206ENST00000571995 TRAV8-2A0A0B4J237 113 aa12.35□□□□□ -0.43
RAB40B-206ENST00000571995 K7ERJ3 54 aa12.35□□□□□ -0.43
RAB40B-206ENST00000571995 LAGE3Q14657 143 aa12.35□□□□□ -0.43
RAB40B-206ENST00000571995 NXT2Q9NPJ8 142 aaKnown RBP12.35□□□□□ -0.43
RAB40B-206ENST00000571995 IGHV4OR15-8A0A075B7B6 117 aa12.34□□□□□ -0.43
RAB40B-206ENST00000571995 A0A087WW49 117 aa12.34□□□□□ -0.43
RAB40B-206ENST00000571995 WFDC11Q8NEX6 87 aa12.34□□□□□ -0.43
RAB40B-206ENST00000571995 NPIPB6E9PJ23 425 aa12.34□□□□□ -0.43
RAB40B-206ENST00000571995 IGKCP01834 107 aa12.34□□□□□ -0.43
RAB40B-206ENST00000571995 SMPXQ9UHP9 88 aa12.34□□□□□ -0.43
RAB40B-206ENST00000571995 OR11H12B2RN74 326 aa12.33□□□□□ -0.44
RAB40B-206ENST00000571995 SRSF1Q07955 248 aaKnown RBP eCLIP12.33□□□□□ -0.44
RAB40B-206ENST00000571995 OR11H2Q8NH07 326 aa12.33□□□□□ -0.44
RAB40B-206ENST00000571995 MAST4O15021 2626 aa12.33□□□□□ -0.44
RAB40B-206ENST00000571995 MGAM2Q2M2H8 2515 aa12.33□□□□□ -0.44
RAB40B-206ENST00000571995 SCGB1C2P0DMR2 95 aa12.33□□□□□ -0.44
RAB40B-206ENST00000571995 BSNQ9UPA5 3926 aa12.33□□□□□ -0.44
RAB40B-206ENST00000571995 IGHG4P01861 327 aa12.33□□□□□ -0.44
RAB40B-206ENST00000571995 NPC2P61916 151 aa12.33□□□□□ -0.44
RAB40B-206ENST00000571995 CYSLTR1Q9Y271 337 aa12.33□□□□□ -0.44
RAB40B-206ENST00000571995 PPBPP02775 128 aa12.32□□□□□ -0.44
RAB40B-206ENST00000571995 SLC25A16P16260 332 aa12.32□□□□□ -0.44
RAB40B-206ENST00000571995 CTRLP40313 264 aa12.32□□□□□ -0.44
RAB40B-206ENST00000571995 EBI3Q14213 229 aa12.32□□□□□ -0.44
RAB40B-206ENST00000571995 A6NDN8 102 aa12.32□□□□□ -0.44
RAB40B-206ENST00000571995 DPM2O94777 84 aa12.32□□□□□ -0.44
RAB40B-206ENST00000571995 CSMD2Q7Z408 3487 aa12.32□□□□□ -0.44
RAB40B-206ENST00000571995 IGHG2P01859 326 aa12.31□□□□□ -0.44
RAB40B-206ENST00000571995 C16orf54Q6UWD8 224 aa12.31□□□□□ -0.44
RAB40B-206ENST00000571995 COX11Q9Y6N1 276 aa12.31□□□□□ -0.44
RAB40B-206ENST00000571995 NBEAL1Q6ZS30 2694 aa12.3□□□□□ -0.44
RAB40B-206ENST00000571995 SAP30O75446 220 aa12.3□□□□□ -0.44
RAB40B-206ENST00000571995 PAX2Q02962 417 aa12.3□□□□□ -0.44
RAB40B-206ENST00000571995 PIFOQ8TCI5 191 aa12.3□□□□□ -0.44
RAB40B-206ENST00000571995 TMEM190Q8WZ59 177 aa12.3□□□□□ -0.44
RAB40B-206ENST00000571995 DPH3P1Q9H4G8 78 aa12.3□□□□□ -0.44
RAB40B-206ENST00000571995 MDFICQ9P1T7 246 aa12.3□□□□□ -0.44
RAB40B-206ENST00000571995 CCL25O15444 150 aa12.3□□□□□ -0.44
RAB40B-206ENST00000571995 SYT8Q8NBV8 401 aa12.3□□□□□ -0.44
RAB40B-206ENST00000571995 SUMO2P61956 95 aaKnown RBP12.3□□□□□ -0.44
RAB40B-206ENST00000571995 BVES-AS1Q5T3Y7 98 aa12.3□□□□□ -0.44
RAB40B-206ENST00000571995 RAX2Q96IS3 184 aa12.3□□□□□ -0.44
RAB40B-206ENST00000571995 SPOCK3Q9BQ16 436 aa12.3□□□□□ -0.44
RAB40B-206ENST00000571995 MXRA5Q9NR99 2828 aa12.29□□□□□ -0.44
RAB40B-206ENST00000571995 MRPS16Q9Y3D3 137 aaKnown RBP12.29□□□□□ -0.44
RAB40B-206ENST00000571995 A6NDX4 124 aa12.29□□□□□ -0.44
RAB40B-206ENST00000571995 ATP5LO75964 103 aa12.29□□□□□ -0.44
RAB40B-206ENST00000571995 RPL39P62891 51 aaKnown RBP12.29□□□□□ -0.44
RAB40B-206ENST00000571995 C2orf66Q6UXQ4 117 aa12.29□□□□□ -0.44
RAB40B-206ENST00000571995 CHTOPQ9Y3Y2 248 aaKnown RBP12.28□□□□□ -0.44
RAB40B-206ENST00000571995 ORAOV1Q8WV07 137 aa12.28□□□□□ -0.44
RAB40B-206ENST00000571995 VPREB3Q9UKI3 123 aa12.28□□□□□ -0.44
RAB40B-206ENST00000571995 TP53TG1Q9Y2A0 90 aa12.27□□□□□ -0.44
RAB40B-206ENST00000571995 TNFRSF18Q9Y5U5 241 aa12.27□□□□□ -0.44
RAB40B-206ENST00000571995 OPRPNQ99935 248 aaPredicted RBP12.27□□□□□ -0.45
RAB40B-206ENST00000571995 SETXQ7Z333 2677 aaKnown RBP12.27□□□□□ -0.45
RAB40B-206ENST00000571995 ADARB2-AS1A8MUL3 147 aa12.27□□□□□ -0.45
RAB40B-206ENST00000571995 LINC01545Q5VT33 79 aa12.27□□□□□ -0.45
RAB40B-206ENST00000571995 ZNF843Q8N446 348 aa12.27□□□□□ -0.45
RAB40B-206ENST00000571995 UNC79Q9P2D8 2635 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms