RNA–Protein interactions for RNA: ENST00000569335.1

HERC2-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 3

Gene HERC2, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-211ENST00000569335 MAP1LC3AQ9H492 121 aa4.87□□□□□ -1.63
HERC2-211ENST00000569335 PAM16Q9Y3D7 125 aa4.87□□□□□ -1.63
HERC2-211ENST00000569335 BAHCC1Q9P281 2608 aa4.87□□□□□ -1.63
HERC2-211ENST00000569335 TRGV11A0A075B6L2 103 aa4.86□□□□□ -1.63
HERC2-211ENST00000569335 IGHV4OR15-8A0A075B7B6 117 aa4.86□□□□□ -1.63
HERC2-211ENST00000569335 A0A087WW49 117 aa4.86□□□□□ -1.63
HERC2-211ENST00000569335 IGHV3-49A0A0A0MS15 119 aa4.86□□□□□ -1.63
HERC2-211ENST00000569335 A0A0J9YX75 114 aa4.86□□□□□ -1.63
HERC2-211ENST00000569335 OR4C46A6NHA9 309 aa4.86□□□□□ -1.63
HERC2-211ENST00000569335 PRSS29PA6NIE9 313 aa4.86□□□□□ -1.63
HERC2-211ENST00000569335 LINC01549A6NIU2 74 aa4.86□□□□□ -1.63
HERC2-211ENST00000569335 M0QZ24 198 aa4.86□□□□□ -1.63
HERC2-211ENST00000569335 DUSP14O95147 198 aaKnown RBP4.86□□□□□ -1.63
HERC2-211ENST00000569335 TNFRSF6BO95407 300 aa4.86□□□□□ -1.63
HERC2-211ENST00000569335 FCER1GP30273 86 aa4.86□□□□□ -1.63
HERC2-211ENST00000569335 LEPP41159 167 aa4.86□□□□□ -1.63
HERC2-211ENST00000569335 ASIPP42127 132 aa4.86□□□□□ -1.63
HERC2-211ENST00000569335 SNRPD3P62318 126 aaKnown RBP4.86□□□□□ -1.63
HERC2-211ENST00000569335 PIK3CD-AS1Q5SR53 167 aa4.86□□□□□ -1.63
HERC2-211ENST00000569335 NRACQ8N912 160 aa4.86□□□□□ -1.63
HERC2-211ENST00000569335 OR1N2Q8NGR9 330 aa4.86□□□□□ -1.63
HERC2-211ENST00000569335 C4orf3Q8WVX3 66 aa4.86□□□□□ -1.63
HERC2-211ENST00000569335 C20orf78Q9BR46 151 aa4.86□□□□□ -1.63
HERC2-211ENST00000569335 TPPP3Q9BW30 176 aa4.86□□□□□ -1.63
HERC2-211ENST00000569335 TMEM160Q9NX00 188 aa4.86□□□□□ -1.63
HERC2-211ENST00000569335 MSRB1Q9NZV6 116 aa4.86□□□□□ -1.63
HERC2-211ENST00000569335 A1L4Q6 167 aa4.85□□□□□ -1.63
HERC2-211ENST00000569335 DLEU1O43261 78 aa4.85□□□□□ -1.63
HERC2-211ENST00000569335 RNASE3P12724 160 aaKnown RBP4.85□□□□□ -1.63
HERC2-211ENST00000569335 PLA2G2AP14555 144 aa4.85□□□□□ -1.63
HERC2-211ENST00000569335 IGLL1P15814 213 aa4.85□□□□□ -1.63
HERC2-211ENST00000569335 HOXD3P31249 432 aaPredicted RBP4.85□□□□□ -1.63
HERC2-211ENST00000569335 SSTP61278 116 aa4.85□□□□□ -1.63
HERC2-211ENST00000569335 NUTF2P61970 127 aaKnown RBP4.85□□□□□ -1.63
HERC2-211ENST00000569335 TMEM95Q3KNT9 176 aa4.85□□□□□ -1.63
HERC2-211ENST00000569335 CD300EQ496F6 205 aaPredicted RBP4.85□□□□□ -1.63
HERC2-211ENST00000569335 ZNF705AQ6ZN79 300 aaPredicted RBP4.85□□□□□ -1.63
HERC2-211ENST00000569335 FOXI2Q6ZQN5 318 aa4.85□□□□□ -1.63
HERC2-211ENST00000569335 LINC00173Q6ZV60 143 aa4.85□□□□□ -1.63
HERC2-211ENST00000569335 OR2K2Q8NGT1 345 aa4.85□□□□□ -1.63
HERC2-211ENST00000569335 PTH2Q96A98 100 aa4.85□□□□□ -1.63
HERC2-211ENST00000569335 FOXC2Q99958 501 aa4.85□□□□□ -1.63
HERC2-211ENST00000569335 PMCHL2Q9BQD1 86 aa4.85□□□□□ -1.63
HERC2-211ENST00000569335 C1orf43Q9BWL3 253 aa4.85□□□□□ -1.63
HERC2-211ENST00000569335 DPH3P1Q9H4G8 78 aa4.85□□□□□ -1.63
HERC2-211ENST00000569335 EDA2RQ9HAV5 297 aa4.85□□□□□ -1.63
HERC2-211ENST00000569335 CSPG4Q6UVK1 2322 aa4.85□□□□□ -1.63
HERC2-211ENST00000569335 USP9YO00507 2555 aaPredicted RBP4.85□□□□□ -1.63
HERC2-211ENST00000569335 ANKRD17O75179 2603 aaKnown RBP4.85□□□□□ -1.63
HERC2-211ENST00000569335 CELSR2Q9HCU4 2923 aa4.84□□□□□ -1.63
HERC2-211ENST00000569335 C7orf71A4D174 169 aa4.84□□□□□ -1.63
HERC2-211ENST00000569335 LINC01619G3V211 115 aa4.84□□□□□ -1.63
HERC2-211ENST00000569335 CD5LO43866 347 aa4.84□□□□□ -1.63
HERC2-211ENST00000569335 CSN3P07498 182 aa4.84□□□□□ -1.63
HERC2-211ENST00000569335 HLA-DRB4P13762 266 aa4.84□□□□□ -1.63
HERC2-211ENST00000569335 TSPOP30536 169 aa4.84□□□□□ -1.63
HERC2-211ENST00000569335 ANXA2RQ3ZCQ2 193 aa4.84□□□□□ -1.63
HERC2-211ENST00000569335 SPANXN1Q5VSR9 72 aa4.84□□□□□ -1.63
HERC2-211ENST00000569335 KRTAP5-3Q6L8H2 238 aa4.84□□□□□ -1.63
HERC2-211ENST00000569335 IFI27L1Q96BM0 104 aa4.84□□□□□ -1.63
HERC2-211ENST00000569335 C9orf85Q96MD7 179 aa4.84□□□□□ -1.63
HERC2-211ENST00000569335 LINC00467Q9BRT7 94 aa4.84□□□□□ -1.63
HERC2-211ENST00000569335 C16orf95Q9H693 158 aa4.84□□□□□ -1.63
HERC2-211ENST00000569335 PEMTQ9UBM1 199 aa4.84□□□□□ -1.63
HERC2-211ENST00000569335 ZMAT5Q9UDW3 170 aaKnown RBP4.84□□□□□ -1.63
HERC2-211ENST00000569335 KIF25-AS1Q9Y6Z4 181 aa4.84□□□□□ -1.63
HERC2-211ENST00000569335 HLA-DRB4X5D2U9 266 aa4.84□□□□□ -1.63
HERC2-211ENST00000569335 NAV2Q8IVL1 2488 aa4.84□□□□□ -1.64
HERC2-211ENST00000569335 CREBBPQ92793 2442 aa4.84□□□□□ -1.64
HERC2-211ENST00000569335 TRAV25A0A0B4J276 109 aa4.83□□□□□ -1.64
HERC2-211ENST00000569335 HSBP1L1C9JCN9 74 aa4.83□□□□□ -1.64
HERC2-211ENST00000569335 H3BVH4 76 aa4.83□□□□□ -1.64
HERC2-211ENST00000569335 J3QKU1 62 aa4.83□□□□□ -1.64
HERC2-211ENST00000569335 SIVA1O15304 175 aa4.83□□□□□ -1.64
HERC2-211ENST00000569335 ATP5LO75964 103 aa4.83□□□□□ -1.64
HERC2-211ENST00000569335 EVI2AP22794 236 aa4.83□□□□□ -1.64
HERC2-211ENST00000569335 G0S2P27469 103 aa4.83□□□□□ -1.64
HERC2-211ENST00000569335 LINC00315P59091 139 aa4.83□□□□□ -1.64
HERC2-211ENST00000569335 KRTAP1-1Q07627 177 aa4.83□□□□□ -1.64
HERC2-211ENST00000569335 SCGB2A2Q13296 93 aa4.83□□□□□ -1.64
HERC2-211ENST00000569335 FHL3Q13643 280 aa4.83□□□□□ -1.64
HERC2-211ENST00000569335 C10orf99Q6UWK7 81 aa4.83□□□□□ -1.64
HERC2-211ENST00000569335 AMTNQ6UX39 209 aa4.83□□□□□ -1.64
HERC2-211ENST00000569335 ADAMTSL5Q6ZMM2 481 aa4.83□□□□□ -1.64
HERC2-211ENST00000569335 AP1S3Q96PC3 154 aa4.83□□□□□ -1.64
HERC2-211ENST00000569335 ZNF256Q9Y2P7 627 aaPredicted RBP4.83□□□□□ -1.64
HERC2-211ENST00000569335 NBPF19A0A087WUL8 3843 aa4.83□□□□□ -1.64
HERC2-211ENST00000569335 UTP20O75691 2785 aaKnown RBP4.82□□□□□ -1.64
HERC2-211ENST00000569335 TRAV12-1A0A0B4J245 112 aa4.82□□□□□ -1.64
HERC2-211ENST00000569335 TRBV6-5A0A0K0K1A5 114 aa4.82□□□□□ -1.64
HERC2-211ENST00000569335 SMKR1H3BMG3 65 aa4.82□□□□□ -1.64
HERC2-211ENST00000569335 COX8AP10176 69 aa4.82□□□□□ -1.64
HERC2-211ENST00000569335 S100A4P26447 101 aaKnown RBP4.82□□□□□ -1.64
HERC2-211ENST00000569335 CDKN1BP46527 198 aa4.82□□□□□ -1.64
HERC2-211ENST00000569335 HNRNPA3P51991 378 aaKnown RBP4.82□□□□□ -1.64
HERC2-211ENST00000569335 SYNJ2BPP57105 145 aa4.82□□□□□ -1.64
HERC2-211ENST00000569335 GAGE1Q13065 139 aa4.82□□□□□ -1.64
HERC2-211ENST00000569335 LAGE3Q14657 143 aa4.82□□□□□ -1.64
HERC2-211ENST00000569335 ORMDL2Q53FV1 153 aa4.82□□□□□ -1.64
HERC2-211ENST00000569335 TCTEX1D4Q5JR98 221 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms