RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 XKRY2A2RUG3 117 aa11.85□□□□□ -0.51
COMMD4-224ENST00000568877 ATP5G1P05496 136 aa11.85□□□□□ -0.51
COMMD4-224ENST00000568877 ADIRFQ15847 76 aa11.85□□□□□ -0.51
COMMD4-224ENST00000568877 ZNF876PQ49A33 203 aa11.85□□□□□ -0.51
COMMD4-224ENST00000568877 CEMP1Q6PRD7 247 aaPredicted RBP11.85□□□□□ -0.51
COMMD4-224ENST00000568877 PTH2Q96A98 100 aa11.85□□□□□ -0.51
COMMD4-224ENST00000568877 RPP21Q9H633 154 aaKnown RBP11.85□□□□□ -0.51
COMMD4-224ENST00000568877 SCRT2Q9NQ03 307 aa11.85□□□□□ -0.51
COMMD4-224ENST00000568877 NUPR2A6NF83 97 aa11.84□□□□□ -0.51
COMMD4-224ENST00000568877 GATCO43716 136 aaKnown RBP11.84□□□□□ -0.51
COMMD4-224ENST00000568877 MED14OSP0DP75 135 aa11.84□□□□□ -0.51
COMMD4-224ENST00000568877 GZMBP10144 247 aa11.84□□□□□ -0.51
COMMD4-224ENST00000568877 HTN3P15516 51 aa11.84□□□□□ -0.51
COMMD4-224ENST00000568877 ISOC2Q96AB3 205 aa11.84□□□□□ -0.51
COMMD4-224ENST00000568877 TMEM218A2RU14 115 aa11.83□□□□□ -0.52
COMMD4-224ENST00000568877 NDUFAF3Q9BU61 184 aa11.83□□□□□ -0.52
COMMD4-224ENST00000568877 SSBP4Q9BWG4 385 aaPredicted RBP11.83□□□□□ -0.52
COMMD4-224ENST00000568877 OSTCQ9NRP0 149 aa11.83□□□□□ -0.52
COMMD4-224ENST00000568877 PHLDA3Q9Y5J5 127 aa11.83□□□□□ -0.52
COMMD4-224ENST00000568877 DYNC2H1Q8NCM8 4307 aaKnown RBP11.83□□□□□ -0.52
COMMD4-224ENST00000568877 SNAI2O43623 268 aa11.82□□□□□ -0.52
COMMD4-224ENST00000568877 OR5AL1P0C617 328 aa11.82□□□□□ -0.52
COMMD4-224ENST00000568877 PIK3CD-AS1Q5SR53 167 aa11.82□□□□□ -0.52
COMMD4-224ENST00000568877 CASC10Q5T4H9 136 aa11.82□□□□□ -0.52
COMMD4-224ENST00000568877 C15orf54Q8N8G6 183 aa11.82□□□□□ -0.52
COMMD4-224ENST00000568877 SYT8Q8NBV8 401 aa11.82□□□□□ -0.52
COMMD4-224ENST00000568877 SFRP2Q96HF1 295 aa11.82□□□□□ -0.52
COMMD4-224ENST00000568877 F5H768 121 aa11.81□□□□□ -0.52
COMMD4-224ENST00000568877 IGLC6P0CF74 106 aa11.81□□□□□ -0.52
COMMD4-224ENST00000568877 DMRTA1Q5VZB9 504 aa11.81□□□□□ -0.52
COMMD4-224ENST00000568877 FER1L6-AS1Q8NA97 138 aa11.81□□□□□ -0.52
COMMD4-224ENST00000568877 KLK5Q9Y337 293 aaPredicted RBP11.81□□□□□ -0.52
COMMD4-224ENST00000568877 TRAV4A0A0B4J268 109 aa11.8□□□□□ -0.52
COMMD4-224ENST00000568877 A8MWL6 223 aa11.8□□□□□ -0.52
COMMD4-224ENST00000568877 F8W036 122 aa11.8□□□□□ -0.52
COMMD4-224ENST00000568877 M0R381 172 aa11.8□□□□□ -0.52
COMMD4-224ENST00000568877 IGHV3-53P01767 116 aa11.8□□□□□ -0.52
COMMD4-224ENST00000568877 CT83Q5H943 113 aa11.8□□□□□ -0.52
COMMD4-224ENST00000568877 ZFP82Q8N141 532 aa11.8□□□□□ -0.52
COMMD4-224ENST00000568877 POM121L12Q8N7R1 296 aa11.8□□□□□ -0.52
COMMD4-224ENST00000568877 OR4C5Q8NGB2 326 aa11.8□□□□□ -0.52
COMMD4-224ENST00000568877 OR10G8Q8NGN5 311 aa11.8□□□□□ -0.52
COMMD4-224ENST00000568877 TPPP3Q9BW30 176 aa11.8□□□□□ -0.52
COMMD4-224ENST00000568877 A0A1W2PPQ1 181 aa11.79□□□□□ -0.52
COMMD4-224ENST00000568877 RS1O15537 224 aa11.79□□□□□ -0.52
COMMD4-224ENST00000568877 ADCYAP1P18509 176 aa11.79□□□□□ -0.52
COMMD4-224ENST00000568877 HOXA5P20719 270 aa11.79□□□□□ -0.52
COMMD4-224ENST00000568877 PNRC1Q12796 327 aaPredicted RBP11.79□□□□□ -0.52
COMMD4-224ENST00000568877 OR10AG1Q8NH19 301 aa11.79□□□□□ -0.52
COMMD4-224ENST00000568877 CSMD3Q7Z407 3707 aa11.79□□□□□ -0.52
COMMD4-224ENST00000568877 STARD9Q9P2P6 4700 aa11.79□□□□□ -0.52
COMMD4-224ENST00000568877 MUC21A0A0G2JKD1 596 aa11.78□□□□□ -0.52
COMMD4-224ENST00000568877 MUC21A0A140T8X8 626 aa11.78□□□□□ -0.52
COMMD4-224ENST00000568877 A8MWV9 139 aa11.78□□□□□ -0.52
COMMD4-224ENST00000568877 IGLL5B9A064 214 aa11.78□□□□□ -0.52
COMMD4-224ENST00000568877 F2Z2F3 143 aa11.78□□□□□ -0.52
COMMD4-224ENST00000568877 NXPH4O95158 308 aa11.78□□□□□ -0.52
COMMD4-224ENST00000568877 SPANXN1Q5VSR9 72 aa11.78□□□□□ -0.52
COMMD4-224ENST00000568877 CFAP126Q5VTH2 177 aa11.78□□□□□ -0.52
COMMD4-224ENST00000568877 GTSF1Q8WW33 167 aa11.78□□□□□ -0.52
COMMD4-224ENST00000568877 ZNF479Q96JC4 524 aa11.78□□□□□ -0.52
COMMD4-224ENST00000568877 SEC11CQ9BY50 192 aa11.78□□□□□ -0.52
COMMD4-224ENST00000568877 V9GYV3 84 aa11.78□□□□□ -0.52
COMMD4-224ENST00000568877 MUC4Q99102 2169 aa11.77□□□□□ -0.53
COMMD4-224ENST00000568877 TMEM88Q6PEY1 159 aa11.77□□□□□ -0.53
COMMD4-224ENST00000568877 LYZL1Q6UWQ5 148 aa11.77□□□□□ -0.53
COMMD4-224ENST00000568877 TSKUQ8WUA8 353 aa11.77□□□□□ -0.53
COMMD4-224ENST00000568877 FAM210BQ96KR6 192 aa11.77□□□□□ -0.53
COMMD4-224ENST00000568877 CIDEAO60543 219 aa11.76□□□□□ -0.53
COMMD4-224ENST00000568877 CTRLP40313 264 aa11.76□□□□□ -0.53
COMMD4-224ENST00000568877 SSTP61278 116 aa11.76□□□□□ -0.53
COMMD4-224ENST00000568877 CACNG7P62955 275 aa11.76□□□□□ -0.53
COMMD4-224ENST00000568877 FHL2Q14192 279 aa11.76□□□□□ -0.53
COMMD4-224ENST00000568877 GFRA4Q9GZZ7 299 aa11.76□□□□□ -0.53
COMMD4-224ENST00000568877 JPT2Q9H910 190 aa11.76□□□□□ -0.53
COMMD4-224ENST00000568877 IGHV4-4A0A075B6R2 117 aa11.75□□□□□ -0.53
COMMD4-224ENST00000568877 TRGV4A0A0C4DH28 118 aa11.75□□□□□ -0.53
COMMD4-224ENST00000568877 FAM231BA6NCW3 169 aa11.75□□□□□ -0.53
COMMD4-224ENST00000568877 FOXA3P55318 350 aaPredicted RBP11.75□□□□□ -0.53
COMMD4-224ENST00000568877 SLAQ13239 276 aa11.75□□□□□ -0.53
COMMD4-224ENST00000568877 WDR73Q6P4I2 378 aa11.75□□□□□ -0.53
COMMD4-224ENST00000568877 HHLA3Q9XRX5 114 aa11.75□□□□□ -0.53
COMMD4-224ENST00000568877 PLECQ15149 4684 aaKnown RBP11.75□□□□□ -0.53
COMMD4-224ENST00000568877 TRAV26-1A0A087WT03 109 aa11.74□□□□□ -0.53
COMMD4-224ENST00000568877 TCTAP57738 103 aa11.74□□□□□ -0.53
COMMD4-224ENST00000568877 C10orf91Q5T1B1 145 aa11.74□□□□□ -0.53
COMMD4-224ENST00000568877 ZFP2Q6ZN57 461 aa11.74□□□□□ -0.53
COMMD4-224ENST00000568877 SAMD10Q9BYL1 202 aa11.74□□□□□ -0.53
COMMD4-224ENST00000568877 PRO0255Q9UI72 69 aa11.74□□□□□ -0.53
COMMD4-224ENST00000568877 IGHV3-73A0A0B4J1V6 119 aa11.73□□□□□ -0.53
COMMD4-224ENST00000568877 A0A0J9YY99 117 aa11.73□□□□□ -0.53
COMMD4-224ENST00000568877 PPP1R2P9O14990 202 aa11.73□□□□□ -0.53
COMMD4-224ENST00000568877 RNF212Q495C1 297 aa11.73□□□□□ -0.53
COMMD4-224ENST00000568877 UFSP1Q6NVU6 142 aa11.73□□□□□ -0.53
COMMD4-224ENST00000568877 PGLYRP4Q96LB8 373 aa11.73□□□□□ -0.53
COMMD4-224ENST00000568877 CNFNQ9BYD5 112 aa11.73□□□□□ -0.53
COMMD4-224ENST00000568877 MSRB1Q9NZV6 116 aa11.73□□□□□ -0.53
COMMD4-224ENST00000568877 APLNQ9ULZ1 77 aa11.73□□□□□ -0.53
COMMD4-224ENST00000568877 A0A087WWL8 130 aa11.72□□□□□ -0.53
COMMD4-224ENST00000568877 HIGD1CA8MV81 97 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 448.1 ms