RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 Q9H8V8 135 aa6.55□□□□□ -1.36
SF3B3-211ENST00000568291 DYNC1H1Q14204 4646 aaKnown RBP6.55□□□□□ -1.36
SF3B3-211ENST00000568291 NBDYA0A0U1RRE5 68 aa6.54□□□□□ -1.36
SF3B3-211ENST00000568291 C16orf90A8MZG2 172 aa6.54□□□□□ -1.36
SF3B3-211ENST00000568291 SH2D1AO60880 128 aa6.54□□□□□ -1.36
SF3B3-211ENST00000568291 C1QBP02746 253 aa6.54□□□□□ -1.36
SF3B3-211ENST00000568291 AKR1C3P42330 323 aa6.54□□□□□ -1.36
SF3B3-211ENST00000568291 PPT1P50897 306 aa6.54□□□□□ -1.36
SF3B3-211ENST00000568291 FAM3BP58499 235 aaPredicted RBP6.54□□□□□ -1.36
SF3B3-211ENST00000568291 ZNF876PQ49A33 203 aa6.54□□□□□ -1.36
SF3B3-211ENST00000568291 AKAP14Q86UN6 197 aa6.54□□□□□ -1.36
SF3B3-211ENST00000568291 HIST1H2BAQ96A08 127 aa6.54□□□□□ -1.36
SF3B3-211ENST00000568291 JPT2Q9H910 190 aa6.54□□□□□ -1.36
SF3B3-211ENST00000568291 GNG13Q9P2W3 67 aa6.54□□□□□ -1.36
SF3B3-211ENST00000568291 PRO0255Q9UI72 69 aa6.54□□□□□ -1.36
SF3B3-211ENST00000568291 PKD1P98161 4303 aa6.54□□□□□ -1.36
SF3B3-211ENST00000568291 FABP5P3A8MUU1 101 aa6.53□□□□□ -1.36
SF3B3-211ENST00000568291 K7EQD1 137 aa6.53□□□□□ -1.36
SF3B3-211ENST00000568291 GYPEP15421 78 aa6.53□□□□□ -1.36
SF3B3-211ENST00000568291 NKX2-5P52952 324 aaPredicted RBP6.53□□□□□ -1.36
SF3B3-211ENST00000568291 ZNF506Q5JVG8 444 aa6.53□□□□□ -1.36
SF3B3-211ENST00000568291 CFAP126Q5VTH2 177 aa6.53□□□□□ -1.36
SF3B3-211ENST00000568291 Q6ZSN1 163 aa6.53□□□□□ -1.36
SF3B3-211ENST00000568291 C9orf85Q96MD7 179 aa6.53□□□□□ -1.36
SF3B3-211ENST00000568291 NKX6-2Q9C056 277 aaPredicted RBP6.53□□□□□ -1.36
SF3B3-211ENST00000568291 TNFRSF18Q9Y5U5 241 aa6.53□□□□□ -1.36
SF3B3-211ENST00000568291 ICOSQ9Y6W8 199 aa6.53□□□□□ -1.36
SF3B3-211ENST00000568291 TRAV4A0A0B4J268 109 aa6.52□□□□□ -1.37
SF3B3-211ENST00000568291 MUC21A0A0G2JKD1 596 aa6.52□□□□□ -1.37
SF3B3-211ENST00000568291 MUC21A0A140T8X8 626 aa6.52□□□□□ -1.37
SF3B3-211ENST00000568291 B4DEV8 164 aa6.52□□□□□ -1.37
SF3B3-211ENST00000568291 KRBOX1C9JBD0 128 aa6.52□□□□□ -1.37
SF3B3-211ENST00000568291 H3BNG1 76 aa6.52□□□□□ -1.37
SF3B3-211ENST00000568291 H3BVH4 76 aa6.52□□□□□ -1.37
SF3B3-211ENST00000568291 LTAP01374 205 aa6.52□□□□□ -1.37
SF3B3-211ENST00000568291 S100A4P26447 101 aaKnown RBP6.52□□□□□ -1.37
SF3B3-211ENST00000568291 SSTP61278 116 aa6.52□□□□□ -1.37
SF3B3-211ENST00000568291 EIF5AP63241 154 aaKnown RBP6.52□□□□□ -1.37
SF3B3-211ENST00000568291 RPL19P84098 196 aaKnown RBP6.52□□□□□ -1.37
SF3B3-211ENST00000568291 LYPD5Q6UWN5 251 aa6.52□□□□□ -1.37
SF3B3-211ENST00000568291 C6orf223Q8N319 242 aa6.52□□□□□ -1.37
SF3B3-211ENST00000568291 C9orf62Q8N4C0 152 aa6.52□□□□□ -1.37
SF3B3-211ENST00000568291 FMC1Q96HJ9 113 aa6.52□□□□□ -1.37
SF3B3-211ENST00000568291 DERL1Q9BUN8 251 aa6.52□□□□□ -1.37
SF3B3-211ENST00000568291 SAMD10Q9BYL1 202 aa6.52□□□□□ -1.37
SF3B3-211ENST00000568291 Q9UF83 564 aa6.52□□□□□ -1.37
SF3B3-211ENST00000568291 MRPS16Q9Y3D3 137 aaKnown RBP6.52□□□□□ -1.37
SF3B3-211ENST00000568291 FBLL1A6NHQ2 334 aaKnown RBP6.51□□□□□ -1.37
SF3B3-211ENST00000568291 RS1O15537 224 aa6.51□□□□□ -1.37
SF3B3-211ENST00000568291 CDK2AP2O75956 126 aa6.51□□□□□ -1.37
SF3B3-211ENST00000568291 NXPH4O95158 308 aa6.51□□□□□ -1.37
SF3B3-211ENST00000568291 ARMS2P0C7Q2 107 aa6.51□□□□□ -1.37
SF3B3-211ENST00000568291 ASIPP42127 132 aa6.51□□□□□ -1.37
SF3B3-211ENST00000568291 MRPL23Q16540 153 aaKnown RBP6.51□□□□□ -1.37
SF3B3-211ENST00000568291 FAM162BQ5T6X4 162 aa6.51□□□□□ -1.37
SF3B3-211ENST00000568291 PRR27Q6MZM9 219 aa6.51□□□□□ -1.37
SF3B3-211ENST00000568291 MAPKAPK5-AS1Q8N8E1 139 aa6.51□□□□□ -1.37
SF3B3-211ENST00000568291 SLC25A29Q8N8R3 303 aa6.51□□□□□ -1.37
SF3B3-211ENST00000568291 ZFP30Q9Y2G7 519 aa6.51□□□□□ -1.37
SF3B3-211ENST00000568291 RAB19A4D1S5 217 aa6.5□□□□□ -1.37
SF3B3-211ENST00000568291 GATA1P15976 413 aaPredicted RBP6.5□□□□□ -1.37
SF3B3-211ENST00000568291 SRIP30626 198 aa6.5□□□□□ -1.37
SF3B3-211ENST00000568291 SULT1A2P50226 295 aa6.5□□□□□ -1.37
SF3B3-211ENST00000568291 ZNF674Q2M3X9 581 aa6.5□□□□□ -1.37
SF3B3-211ENST00000568291 ALKAL2Q6UX46 152 aa6.5□□□□□ -1.37
SF3B3-211ENST00000568291 NEGR1Q7Z3B1 354 aa6.5□□□□□ -1.37
SF3B3-211ENST00000568291 SLC51BQ86UW2 128 aa6.5□□□□□ -1.37
SF3B3-211ENST00000568291 BAGE2Q86Y30 109 aa6.5□□□□□ -1.37
SF3B3-211ENST00000568291 PCNPQ8WW12 178 aaKnown RBP6.5□□□□□ -1.37
SF3B3-211ENST00000568291 HSPG2P98160 4391 aa6.49□□□□□ -1.37
SF3B3-211ENST00000568291 A0A087WWL8 130 aa6.49□□□□□ -1.37
SF3B3-211ENST00000568291 TRBV6-1A0A0K0K1D8 114 aa6.49□□□□□ -1.37
SF3B3-211ENST00000568291 M0R381 172 aa6.49□□□□□ -1.37
SF3B3-211ENST00000568291 RPL35P42766 123 aaKnown RBP6.49□□□□□ -1.37
SF3B3-211ENST00000568291 SLAQ13239 276 aa6.49□□□□□ -1.37
SF3B3-211ENST00000568291 COX8CQ7Z4L0 72 aa6.49□□□□□ -1.37
SF3B3-211ENST00000568291 WFDC10BQ8IUB3 73 aa6.49□□□□□ -1.37
SF3B3-211ENST00000568291 TRAV1-1A0A0B4J248 108 aa6.48□□□□□ -1.37
SF3B3-211ENST00000568291 GAGE12JA6NER3 117 aa6.48□□□□□ -1.37
SF3B3-211ENST00000568291 SIVA1O15304 175 aa6.48□□□□□ -1.37
SF3B3-211ENST00000568291 FUSP35637 526 aaKnown RBP eCLIP6.48□□□□□ -1.37
SF3B3-211ENST00000568291 GAGE1Q13065 139 aa6.48□□□□□ -1.37
SF3B3-211ENST00000568291 GAGE4Q13068 117 aa6.48□□□□□ -1.37
SF3B3-211ENST00000568291 GAGE5Q13069 117 aa6.48□□□□□ -1.37
SF3B3-211ENST00000568291 GAGE13Q4V321 117 aa6.48□□□□□ -1.37
SF3B3-211ENST00000568291 FAM74A4Q5TZK3 123 aa6.48□□□□□ -1.37
SF3B3-211ENST00000568291 EIF5AL1Q6IS14 154 aaKnown RBP6.48□□□□□ -1.37
SF3B3-211ENST00000568291 C14orf178Q8N769 122 aaPredicted RBP6.48□□□□□ -1.37
SF3B3-211ENST00000568291 UPK3BQ9BT76 320 aa6.48□□□□□ -1.37
SF3B3-211ENST00000568291 MLST8Q9BVC4 326 aa6.48□□□□□ -1.37
SF3B3-211ENST00000568291 PARLQ9H300 379 aa6.48□□□□□ -1.37
SF3B3-211ENST00000568291 EREGO14944 169 aa6.47□□□□□ -1.37
SF3B3-211ENST00000568291 IGLV2-8P01709 118 aa6.47□□□□□ -1.37
SF3B3-211ENST00000568291 GZMBP10144 247 aa6.47□□□□□ -1.37
SF3B3-211ENST00000568291 MGST1P10620 155 aaKnown RBP6.47□□□□□ -1.37
SF3B3-211ENST00000568291 RAB5CP51148 216 aa6.47□□□□□ -1.37
SF3B3-211ENST00000568291 TTC32Q5I0X7 151 aa6.47□□□□□ -1.37
SF3B3-211ENST00000568291 SPATA12Q7Z6I5 190 aa6.47□□□□□ -1.37
SF3B3-211ENST00000568291 TCEAL7Q9BRU2 100 aa6.47□□□□□ -1.37
SF3B3-211ENST00000568291 MANBALQ9NQG1 85 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 230.9 ms