RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 CASC10Q5T4H9 136 aa12.7□□□□□ -0.38
COMMD4-222ENST00000568034 CEMP1Q6PRD7 247 aaPredicted RBP12.7□□□□□ -0.38
COMMD4-222ENST00000568034 UQCC3Q6UW78 93 aa12.7□□□□□ -0.38
COMMD4-222ENST00000568034 FAM231DQ6ZW35 169 aa12.7□□□□□ -0.38
COMMD4-222ENST00000568034 OR2D3Q8NGH3 330 aa12.7□□□□□ -0.38
COMMD4-222ENST00000568034 PTH2Q96A98 100 aa12.7□□□□□ -0.38
COMMD4-222ENST00000568034 DEFB131BA0A096LNP1 70 aa12.69□□□□□ -0.38
COMMD4-222ENST00000568034 NUPR2A6NF83 97 aa12.69□□□□□ -0.38
COMMD4-222ENST00000568034 MED14OSP0DP75 135 aa12.69□□□□□ -0.38
COMMD4-222ENST00000568034 GZMBP10144 247 aa12.69□□□□□ -0.38
COMMD4-222ENST00000568034 POM121L12Q8N7R1 296 aa12.69□□□□□ -0.38
COMMD4-222ENST00000568034 ISOC2Q96AB3 205 aa12.69□□□□□ -0.38
COMMD4-222ENST00000568034 DNAH1Q9P2D7 4330 aa12.68□□□□□ -0.38
COMMD4-222ENST00000568034 SNAI2O43623 268 aa12.68□□□□□ -0.38
COMMD4-222ENST00000568034 ATP6V1G1O75348 118 aa12.68□□□□□ -0.38
COMMD4-222ENST00000568034 ATP5G1P05496 136 aa12.68□□□□□ -0.38
COMMD4-222ENST00000568034 IGLC6P0CF74 106 aa12.68□□□□□ -0.38
COMMD4-222ENST00000568034 SSBP4Q9BWG4 385 aaPredicted RBP12.68□□□□□ -0.38
COMMD4-222ENST00000568034 RPP21Q9H633 154 aaKnown RBP12.68□□□□□ -0.38
COMMD4-222ENST00000568034 TRGV2A0A075B6R0 118 aa12.67□□□□□ -0.38
COMMD4-222ENST00000568034 ADCYAP1P18509 176 aa12.67□□□□□ -0.38
COMMD4-222ENST00000568034 HOXA5P20719 270 aa12.67□□□□□ -0.38
COMMD4-222ENST00000568034 RPS20P60866 119 aaKnown RBP12.67□□□□□ -0.38
COMMD4-222ENST00000568034 ZNF876PQ49A33 203 aa12.67□□□□□ -0.38
COMMD4-222ENST00000568034 SACSQ9NZJ4 4579 aa12.67□□□□□ -0.38
COMMD4-222ENST00000568034 NACAE9PAV3 2078 aa12.66□□□□□ -0.38
COMMD4-222ENST00000568034 HTN3P15516 51 aa12.66□□□□□ -0.38
COMMD4-222ENST00000568034 ADIRFQ15847 76 aa12.66□□□□□ -0.38
COMMD4-222ENST00000568034 DMRTA1Q5VZB9 504 aa12.66□□□□□ -0.38
COMMD4-222ENST00000568034 OSTCQ9NRP0 149 aa12.66□□□□□ -0.38
COMMD4-222ENST00000568034 ALMS1Q8TCU4 4167 aa12.66□□□□□ -0.38
COMMD4-222ENST00000568034 TMEM218A2RU14 115 aa12.65□□□□□ -0.38
COMMD4-222ENST00000568034 GATCO43716 136 aaKnown RBP12.65□□□□□ -0.38
COMMD4-222ENST00000568034 NXPH4O95158 308 aa12.65□□□□□ -0.38
COMMD4-222ENST00000568034 IGHV3-53P01767 116 aa12.65□□□□□ -0.38
COMMD4-222ENST00000568034 OR5AL1P0C617 328 aa12.65□□□□□ -0.38
COMMD4-222ENST00000568034 ERVFC1-1P60608 527 aa12.65□□□□□ -0.38
COMMD4-222ENST00000568034 PIK3CD-AS1Q5SR53 167 aa12.65□□□□□ -0.38
COMMD4-222ENST00000568034 OR10AG1Q8NH19 301 aa12.65□□□□□ -0.38
COMMD4-222ENST00000568034 NDUFAF3Q9BU61 184 aa12.65□□□□□ -0.38
COMMD4-222ENST00000568034 TRAV4A0A0B4J268 109 aa12.64□□□□□ -0.39
COMMD4-222ENST00000568034 RS1O15537 224 aa12.64□□□□□ -0.39
COMMD4-222ENST00000568034 CT83Q5H943 113 aa12.64□□□□□ -0.39
COMMD4-222ENST00000568034 ZNF479Q96JC4 524 aa12.64□□□□□ -0.39
COMMD4-222ENST00000568034 PHLDA3Q9Y5J5 127 aa12.64□□□□□ -0.39
COMMD4-222ENST00000568034 V9GYV3 84 aa12.64□□□□□ -0.39
COMMD4-222ENST00000568034 VPS13DQ5THJ4 4388 aa12.64□□□□□ -0.39
COMMD4-222ENST00000568034 XKRY2A2RUG3 117 aa12.63□□□□□ -0.39
COMMD4-222ENST00000568034 F5H768 121 aa12.63□□□□□ -0.39
COMMD4-222ENST00000568034 CFAP126Q5VTH2 177 aa12.63□□□□□ -0.39
COMMD4-222ENST00000568034 FER1L6-AS1Q8NA97 138 aa12.63□□□□□ -0.39
COMMD4-222ENST00000568034 GTSF1Q8WW33 167 aa12.63□□□□□ -0.39
COMMD4-222ENST00000568034 SFRP2Q96HF1 295 aa12.63□□□□□ -0.39
COMMD4-222ENST00000568034 MUC21A0A0G2JKD1 596 aa12.62□□□□□ -0.39
COMMD4-222ENST00000568034 MUC21A0A140T8X8 626 aa12.62□□□□□ -0.39
COMMD4-222ENST00000568034 M0R381 172 aa12.62□□□□□ -0.39
COMMD4-222ENST00000568034 FHL2Q14192 279 aa12.62□□□□□ -0.39
COMMD4-222ENST00000568034 TMEM88Q6PEY1 159 aa12.62□□□□□ -0.39
COMMD4-222ENST00000568034 ZFP82Q8N141 532 aa12.62□□□□□ -0.39
COMMD4-222ENST00000568034 JPT2Q9H910 190 aa12.62□□□□□ -0.39
COMMD4-222ENST00000568034 KLK5Q9Y337 293 aaPredicted RBP12.62□□□□□ -0.39
COMMD4-222ENST00000568034 KMT2CQ8NEZ4 4911 aaKnown RBP12.62□□□□□ -0.39
COMMD4-222ENST00000568034 IGHV4-4A0A075B6R2 117 aa12.61□□□□□ -0.39
COMMD4-222ENST00000568034 IGLL5B9A064 214 aa12.61□□□□□ -0.39
COMMD4-222ENST00000568034 CTRLP40313 264 aa12.61□□□□□ -0.39
COMMD4-222ENST00000568034 SYT8Q8NBV8 401 aa12.61□□□□□ -0.39
COMMD4-222ENST00000568034 OR4C5Q8NGB2 326 aa12.61□□□□□ -0.39
COMMD4-222ENST00000568034 SAMD10Q9BYL1 202 aa12.61□□□□□ -0.39
COMMD4-222ENST00000568034 A0A1W2PPQ1 181 aa12.6□□□□□ -0.39
COMMD4-222ENST00000568034 UFSP1Q6NVU6 142 aa12.6□□□□□ -0.39
COMMD4-222ENST00000568034 LYZL1Q6UWQ5 148 aa12.6□□□□□ -0.39
COMMD4-222ENST00000568034 OR10G8Q8NGN5 311 aa12.6□□□□□ -0.39
COMMD4-222ENST00000568034 FAM210BQ96KR6 192 aa12.6□□□□□ -0.39
COMMD4-222ENST00000568034 TPPP3Q9BW30 176 aa12.6□□□□□ -0.39
COMMD4-222ENST00000568034 APLNQ9ULZ1 77 aa12.6□□□□□ -0.39
COMMD4-222ENST00000568034 A8MWL6 223 aa12.59□□□□□ -0.39
COMMD4-222ENST00000568034 A8MWV9 139 aa12.59□□□□□ -0.39
COMMD4-222ENST00000568034 FOXA3P55318 350 aaPredicted RBP12.59□□□□□ -0.39
COMMD4-222ENST00000568034 PNRC1Q12796 327 aaPredicted RBP12.59□□□□□ -0.39
COMMD4-222ENST00000568034 C15orf54Q8N8G6 183 aa12.59□□□□□ -0.39
COMMD4-222ENST00000568034 TSKUQ8WUA8 353 aa12.59□□□□□ -0.39
COMMD4-222ENST00000568034 VSIG2Q96IQ7 327 aa12.59□□□□□ -0.39
COMMD4-222ENST00000568034 SEC11CQ9BY50 192 aa12.59□□□□□ -0.39
COMMD4-222ENST00000568034 CNFNQ9BYD5 112 aa12.59□□□□□ -0.39
COMMD4-222ENST00000568034 TENM2Q9NT68 2774 aa12.58□□□□□ -0.39
COMMD4-222ENST00000568034 TRAV26-1A0A087WT03 109 aa12.58□□□□□ -0.4
COMMD4-222ENST00000568034 F2Z2F3 143 aa12.58□□□□□ -0.4
COMMD4-222ENST00000568034 F8W036 122 aa12.58□□□□□ -0.4
COMMD4-222ENST00000568034 S100A1P23297 94 aa12.58□□□□□ -0.4
COMMD4-222ENST00000568034 C10orf91Q5T1B1 145 aa12.58□□□□□ -0.4
COMMD4-222ENST00000568034 CRYGDP07320 174 aa12.57□□□□□ -0.4
COMMD4-222ENST00000568034 GATA1P15976 413 aaPredicted RBP12.57□□□□□ -0.4
COMMD4-222ENST00000568034 SPANXN1Q5VSR9 72 aa12.57□□□□□ -0.4
COMMD4-222ENST00000568034 GFRA4Q9GZZ7 299 aa12.57□□□□□ -0.4
COMMD4-222ENST00000568034 MSRB1Q9NZV6 116 aa12.57□□□□□ -0.4
COMMD4-222ENST00000568034 LYSTQ99698 3801 aa12.56□□□□□ -0.4
COMMD4-222ENST00000568034 IGHV3-73A0A0B4J1V6 119 aa12.56□□□□□ -0.4
COMMD4-222ENST00000568034 TRGV4A0A0C4DH28 118 aa12.56□□□□□ -0.4
COMMD4-222ENST00000568034 A0A0J9YY99 117 aa12.56□□□□□ -0.4
COMMD4-222ENST00000568034 CRYBA4P53673 196 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms