RNA–Protein interactions for RNA: ENST00000567992.1

CLK3-220, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-220ENST00000567992 SPXQ9BT56 116 aa6.84□□□□□ -1.31
CLK3-220ENST00000567992 MLST8Q9BVC4 326 aa6.84□□□□□ -1.31
CLK3-220ENST00000567992 SH2D1AO60880 128 aa6.83□□□□□ -1.32
CLK3-220ENST00000567992 S100A9P06702 114 aaKnown RBP6.83□□□□□ -1.32
CLK3-220ENST00000567992 P0DMU3 169 aa6.83□□□□□ -1.32
CLK3-220ENST00000567992 FAM231AP0DMU4 169 aa6.83□□□□□ -1.32
CLK3-220ENST00000567992 FAM231CP0DMU5 169 aa6.83□□□□□ -1.32
CLK3-220ENST00000567992 BCL2P10415 239 aa6.83□□□□□ -1.32
CLK3-220ENST00000567992 RNASE3P12724 160 aaKnown RBP6.83□□□□□ -1.32
CLK3-220ENST00000567992 RPL35P42766 123 aaKnown RBP6.83□□□□□ -1.32
CLK3-220ENST00000567992 MEF2BQ02080 365 aaPredicted RBP6.83□□□□□ -1.32
CLK3-220ENST00000567992 OR5I1Q13606 314 aa6.83□□□□□ -1.32
CLK3-220ENST00000567992 VSIG2Q96IQ7 327 aa6.83□□□□□ -1.32
CLK3-220ENST00000567992 DERL1Q9BUN8 251 aa6.83□□□□□ -1.32
CLK3-220ENST00000567992 SMCO4Q9NRQ5 59 aa6.83□□□□□ -1.32
CLK3-220ENST00000567992 A0A0J9YY99 117 aa6.82□□□□□ -1.32
CLK3-220ENST00000567992 FABP5P3A8MUU1 101 aa6.82□□□□□ -1.32
CLK3-220ENST00000567992 H3BNG1 76 aa6.82□□□□□ -1.32
CLK3-220ENST00000567992 M0R2P5 195 aa6.82□□□□□ -1.32
CLK3-220ENST00000567992 IGHV3-53P01767 116 aa6.82□□□□□ -1.32
CLK3-220ENST00000567992 FHL2Q14192 279 aa6.82□□□□□ -1.32
CLK3-220ENST00000567992 LINC01559Q495D7 138 aa6.82□□□□□ -1.32
CLK3-220ENST00000567992 FAM162BQ5T6X4 162 aa6.82□□□□□ -1.32
CLK3-220ENST00000567992 CBLN2Q8IUK8 224 aa6.82□□□□□ -1.32
CLK3-220ENST00000567992 ZNF479Q96JC4 524 aa6.82□□□□□ -1.32
CLK3-220ENST00000567992 TXNDC17Q9BRA2 123 aa6.82□□□□□ -1.32
CLK3-220ENST00000567992 BIRC6Q9NR09 4857 aa6.82□□□□□ -1.32
CLK3-220ENST00000567992 RBFOX3A6NFN3 312 aa6.81□□□□□ -1.32
CLK3-220ENST00000567992 NUDT3O95989 172 aa6.81□□□□□ -1.32
CLK3-220ENST00000567992 IFNA1P01562 189 aa6.81□□□□□ -1.32
CLK3-220ENST00000567992 IGLV2-8P01709 118 aa6.81□□□□□ -1.32
CLK3-220ENST00000567992 RHEBQ15382 184 aa6.81□□□□□ -1.32
CLK3-220ENST00000567992 RNF212Q495C1 297 aa6.81□□□□□ -1.32
CLK3-220ENST00000567992 DNLZQ5SXM8 178 aa6.81□□□□□ -1.32
CLK3-220ENST00000567992 C15orf54Q8N8G6 183 aa6.81□□□□□ -1.32
CLK3-220ENST00000567992 PTH2Q96A98 100 aa6.81□□□□□ -1.32
CLK3-220ENST00000567992 EIF5A2Q9GZV4 153 aaKnown RBP6.81□□□□□ -1.32
CLK3-220ENST00000567992 PKD1P98161 4303 aa6.81□□□□□ -1.32
CLK3-220ENST00000567992 TRBV20OR9-2A0A075B6H5 130 aa6.8□□□□□ -1.32
CLK3-220ENST00000567992 TRAV4A0A0B4J268 109 aa6.8□□□□□ -1.32
CLK3-220ENST00000567992 C7orf77A4D0Y5 90 aa6.8□□□□□ -1.32
CLK3-220ENST00000567992 PGPEP1LA6NFU8 196 aa6.8□□□□□ -1.32
CLK3-220ENST00000567992 COLCA2A8K830 154 aa6.8□□□□□ -1.32
CLK3-220ENST00000567992 B4DEV8 164 aa6.8□□□□□ -1.32
CLK3-220ENST00000567992 M0R036 132 aa6.8□□□□□ -1.32
CLK3-220ENST00000567992 PDE6DO43924 150 aa6.8□□□□□ -1.32
CLK3-220ENST00000567992 ORM1P02763 201 aa6.8□□□□□ -1.32
CLK3-220ENST00000567992 CRYBA4P53673 196 aa6.8□□□□□ -1.32
CLK3-220ENST00000567992 CENPWQ5EE01 88 aa6.8□□□□□ -1.32
CLK3-220ENST00000567992 ZNF506Q5JVG8 444 aa6.8□□□□□ -1.32
CLK3-220ENST00000567992 BAGE2Q86Y30 109 aa6.8□□□□□ -1.32
CLK3-220ENST00000567992 VAX2Q9UIW0 290 aa6.8□□□□□ -1.32
CLK3-220ENST00000567992 DNAH11Q96DT5 4516 aa6.8□□□□□ -1.32
CLK3-220ENST00000567992 A0A096LPF7 62 aa6.79□□□□□ -1.32
CLK3-220ENST00000567992 GRIFINA4D1Z8 144 aa6.79□□□□□ -1.32
CLK3-220ENST00000567992 C9JCJ5 164 aa6.79□□□□□ -1.32
CLK3-220ENST00000567992 H3BVH4 76 aa6.79□□□□□ -1.32
CLK3-220ENST00000567992 RS1O15537 224 aa6.79□□□□□ -1.32
CLK3-220ENST00000567992 SRP19P09132 144 aaKnown RBP6.79□□□□□ -1.32
CLK3-220ENST00000567992 ASIPP42127 132 aa6.79□□□□□ -1.32
CLK3-220ENST00000567992 RPL19P84098 196 aaKnown RBP6.79□□□□□ -1.32
CLK3-220ENST00000567992 ZNF876PQ49A33 203 aa6.79□□□□□ -1.32
CLK3-220ENST00000567992 CFAP126Q5VTH2 177 aa6.79□□□□□ -1.32
CLK3-220ENST00000567992 SCRT2Q9NQ03 307 aa6.79□□□□□ -1.32
CLK3-220ENST00000567992 IL36BQ9NZH7 164 aa6.79□□□□□ -1.32
CLK3-220ENST00000567992 PRO0255Q9UI72 69 aa6.79□□□□□ -1.32
CLK3-220ENST00000567992 LINC00588Q9Y4M8 146 aa6.79□□□□□ -1.32
CLK3-220ENST00000567992 TMSB15BA0A087X1C1 80 aa6.78□□□□□ -1.32
CLK3-220ENST00000567992 NDUFS6O75380 124 aaKnown RBP6.78□□□□□ -1.32
CLK3-220ENST00000567992 MT-ND4LP03901 98 aa6.78□□□□□ -1.32
CLK3-220ENST00000567992 ARMS2P0C7Q2 107 aa6.78□□□□□ -1.32
CLK3-220ENST00000567992 TAGLN2P37802 199 aaKnown RBP6.78□□□□□ -1.32
CLK3-220ENST00000567992 SOHLH1Q5JUK2 328 aa6.78□□□□□ -1.32
CLK3-220ENST00000567992 UBE2DNLQ8IWF7 75 aa6.78□□□□□ -1.32
CLK3-220ENST00000567992 OR4C5Q8NGB2 326 aa6.78□□□□□ -1.32
CLK3-220ENST00000567992 ZNRF2Q8NHG8 242 aa6.78□□□□□ -1.32
CLK3-220ENST00000567992 RPS10P5Q9NQ39 176 aa6.78□□□□□ -1.32
CLK3-220ENST00000567992 HHLA3Q9XRX5 114 aa6.78□□□□□ -1.32
CLK3-220ENST00000567992 A0A087WWC5 75 aa6.77□□□□□ -1.33
CLK3-220ENST00000567992 TRGV4A0A0C4DH28 118 aa6.77□□□□□ -1.33
CLK3-220ENST00000567992 PAX4O43316 350 aa6.77□□□□□ -1.33
CLK3-220ENST00000567992 CXCL1P09341 107 aa6.77□□□□□ -1.33
CLK3-220ENST00000567992 GATA1P15976 413 aaPredicted RBP6.77□□□□□ -1.33
CLK3-220ENST00000567992 S100A4P26447 101 aaKnown RBP6.77□□□□□ -1.33
CLK3-220ENST00000567992 FAM3BP58499 235 aaPredicted RBP6.77□□□□□ -1.33
CLK3-220ENST00000567992 ESRGQ1W209 222 aa6.77□□□□□ -1.33
CLK3-220ENST00000567992 PIK3CD-AS1Q5SR53 167 aa6.77□□□□□ -1.33
CLK3-220ENST00000567992 PRR27Q6MZM9 219 aa6.77□□□□□ -1.33
CLK3-220ENST00000567992 UFSP1Q6NVU6 142 aa6.77□□□□□ -1.33
CLK3-220ENST00000567992 Q6ZR54 194 aa6.77□□□□□ -1.33
CLK3-220ENST00000567992 SMIM12Q96EX1 92 aa6.77□□□□□ -1.33
CLK3-220ENST00000567992 BIN3Q9NQY0 253 aa6.77□□□□□ -1.33
CLK3-220ENST00000567992 IGLV2-18A0A075B6J9 118 aa6.76□□□□□ -1.33
CLK3-220ENST00000567992 C19orf71A6NCJ1 209 aa6.76□□□□□ -1.33
CLK3-220ENST00000567992 K7EQD1 137 aa6.76□□□□□ -1.33
CLK3-220ENST00000567992 NXPH4O95158 308 aa6.76□□□□□ -1.33
CLK3-220ENST00000567992 MED14OSP0DP75 135 aa6.76□□□□□ -1.33
CLK3-220ENST00000567992 GNG4P50150 75 aa6.76□□□□□ -1.33
CLK3-220ENST00000567992 CCL18P55774 89 aa6.76□□□□□ -1.33
CLK3-220ENST00000567992 SLAQ13239 276 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms