RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 TMSB15BA0A087X1C1 80 aa8.6□□□□□ -1.03
SF3B3-208ENST00000567250 PGPEP1LA6NFU8 196 aa8.6□□□□□ -1.03
SF3B3-208ENST00000567250 RNASE3P12724 160 aaKnown RBP8.6□□□□□ -1.03
SF3B3-208ENST00000567250 ZNF876PQ49A33 203 aa8.6□□□□□ -1.03
SF3B3-208ENST00000567250 PIK3CD-AS1Q5SR53 167 aa8.6□□□□□ -1.03
SF3B3-208ENST00000567250 C15orf53Q8NAA6 179 aa8.6□□□□□ -1.03
SF3B3-208ENST00000567250 PTH2Q96A98 100 aa8.6□□□□□ -1.03
SF3B3-208ENST00000567250 PHLDA3Q9Y5J5 127 aa8.6□□□□□ -1.03
SF3B3-208ENST00000567250 TRAV4A0A0B4J268 109 aa8.59□□□□□ -1.03
SF3B3-208ENST00000567250 GRIFINA4D1Z8 144 aa8.59□□□□□ -1.03
SF3B3-208ENST00000567250 C19orf71A6NCJ1 209 aa8.59□□□□□ -1.03
SF3B3-208ENST00000567250 CIDEAO60543 219 aa8.59□□□□□ -1.03
SF3B3-208ENST00000567250 ARMS2P0C7Q2 107 aa8.59□□□□□ -1.03
SF3B3-208ENST00000567250 IFITM2Q01629 132 aa8.59□□□□□ -1.03
SF3B3-208ENST00000567250 STARD9Q9P2P6 4700 aa8.58□□□□□ -1.04
SF3B3-208ENST00000567250 RPL19P84098 196 aaKnown RBP8.58□□□□□ -1.04
SF3B3-208ENST00000567250 SLAQ13239 276 aa8.58□□□□□ -1.04
SF3B3-208ENST00000567250 TMEM88Q6PEY1 159 aa8.58□□□□□ -1.04
SF3B3-208ENST00000567250 ZFP82Q8N141 532 aa8.58□□□□□ -1.04
SF3B3-208ENST00000567250 OR4C5Q8NGB2 326 aa8.58□□□□□ -1.04
SF3B3-208ENST00000567250 OR2D3Q8NGH3 330 aa8.58□□□□□ -1.04
SF3B3-208ENST00000567250 OCC1Q8TAD7 63 aa8.58□□□□□ -1.04
SF3B3-208ENST00000567250 MUC4Q99102 2169 aa8.58□□□□□ -1.04
SF3B3-208ENST00000567250 TRGV4A0A0C4DH28 118 aa8.57□□□□□ -1.04
SF3B3-208ENST00000567250 A8MWV9 139 aa8.57□□□□□ -1.04
SF3B3-208ENST00000567250 IGHV3-53P01767 116 aa8.57□□□□□ -1.04
SF3B3-208ENST00000567250 OR5AL1P0C617 328 aa8.57□□□□□ -1.04
SF3B3-208ENST00000567250 SOHLH1Q5JUK2 328 aa8.57□□□□□ -1.04
SF3B3-208ENST00000567250 FAM231DQ6ZW35 169 aa8.57□□□□□ -1.04
SF3B3-208ENST00000567250 LINC01551Q86U37 167 aa8.57□□□□□ -1.04
SF3B3-208ENST00000567250 RPP21Q9H633 154 aaKnown RBP8.57□□□□□ -1.04
SF3B3-208ENST00000567250 NAT8Q9UHE5 227 aa8.57□□□□□ -1.04
SF3B3-208ENST00000567250 APLNQ9ULZ1 77 aa8.57□□□□□ -1.04
SF3B3-208ENST00000567250 TRAV26-1A0A087WT03 109 aa8.56□□□□□ -1.04
SF3B3-208ENST00000567250 H3BNG1 76 aa8.56□□□□□ -1.04
SF3B3-208ENST00000567250 K7EN84 100 aa8.56□□□□□ -1.04
SF3B3-208ENST00000567250 SNAI2O43623 268 aa8.56□□□□□ -1.04
SF3B3-208ENST00000567250 ERVFC1-1P60608 527 aa8.56□□□□□ -1.04
SF3B3-208ENST00000567250 SRSF3P84103 164 aaKnown RBP8.56□□□□□ -1.04
SF3B3-208ENST00000567250 TNP2Q05952 138 aa8.56□□□□□ -1.04
SF3B3-208ENST00000567250 TMEM241Q24JQ0 296 aa8.56□□□□□ -1.04
SF3B3-208ENST00000567250 SCRT2Q9NQ03 307 aa8.56□□□□□ -1.04
SF3B3-208ENST00000567250 PRO0255Q9UI72 69 aa8.56□□□□□ -1.04
SF3B3-208ENST00000567250 NACAE9PAV3 2078 aa8.55□□□□□ -1.04
SF3B3-208ENST00000567250 A0A1W2PPQ1 181 aa8.55□□□□□ -1.04
SF3B3-208ENST00000567250 M0R381 172 aa8.55□□□□□ -1.04
SF3B3-208ENST00000567250 RHODO00212 210 aa8.55□□□□□ -1.04
SF3B3-208ENST00000567250 SFTA3P0C7M3 94 aa8.55□□□□□ -1.04
SF3B3-208ENST00000567250 HOXA5P20719 270 aa8.55□□□□□ -1.04
SF3B3-208ENST00000567250 CT83Q5H943 113 aa8.55□□□□□ -1.04
SF3B3-208ENST00000567250 SPANXN1Q5VSR9 72 aa8.55□□□□□ -1.04
SF3B3-208ENST00000567250 UQCC3Q6UW78 93 aa8.55□□□□□ -1.04
SF3B3-208ENST00000567250 C15orf54Q8N8G6 183 aa8.55□□□□□ -1.04
SF3B3-208ENST00000567250 FER1L6-AS1Q8NA97 138 aa8.55□□□□□ -1.04
SF3B3-208ENST00000567250 NUDT10Q8NFP7 164 aa8.55□□□□□ -1.04
SF3B3-208ENST00000567250 LINC00476Q8WZB0 136 aa8.55□□□□□ -1.04
SF3B3-208ENST00000567250 NUDT11Q96G61 164 aa8.55□□□□□ -1.04
SF3B3-208ENST00000567250 ZNF479Q96JC4 524 aa8.55□□□□□ -1.04
SF3B3-208ENST00000567250 RNASE7Q9H1E1 156 aaKnown RBP8.55□□□□□ -1.04
SF3B3-208ENST00000567250 LCE6AA0A183 80 aa8.54□□□□□ -1.04
SF3B3-208ENST00000567250 RS1O15537 224 aa8.54□□□□□ -1.04
SF3B3-208ENST00000567250 GATCO43716 136 aaKnown RBP8.54□□□□□ -1.04
SF3B3-208ENST00000567250 P0DMU3 169 aa8.54□□□□□ -1.04
SF3B3-208ENST00000567250 FAM231AP0DMU4 169 aa8.54□□□□□ -1.04
SF3B3-208ENST00000567250 FAM231CP0DMU5 169 aa8.54□□□□□ -1.04
SF3B3-208ENST00000567250 CFAP126Q5VTH2 177 aa8.54□□□□□ -1.04
SF3B3-208ENST00000567250 ZFP2Q6ZN57 461 aa8.54□□□□□ -1.04
SF3B3-208ENST00000567250 SSBP4Q9BWG4 385 aaPredicted RBP8.54□□□□□ -1.04
SF3B3-208ENST00000567250 HHLA3Q9XRX5 114 aa8.54□□□□□ -1.04
SF3B3-208ENST00000567250 A0A0J9YY99 117 aa8.53□□□□□ -1.04
SF3B3-208ENST00000567250 A8MWL6 223 aa8.53□□□□□ -1.04
SF3B3-208ENST00000567250 C9JQL5 133 aa8.53□□□□□ -1.04
SF3B3-208ENST00000567250 F2Z2F3 143 aa8.53□□□□□ -1.04
SF3B3-208ENST00000567250 PAX4O43316 350 aa8.53□□□□□ -1.04
SF3B3-208ENST00000567250 NXPH4O95158 308 aa8.53□□□□□ -1.04
SF3B3-208ENST00000567250 NUDT3O95989 172 aa8.53□□□□□ -1.04
SF3B3-208ENST00000567250 IGLC6P0CF74 106 aa8.53□□□□□ -1.04
SF3B3-208ENST00000567250 RPL23P62829 140 aaKnown RBP8.53□□□□□ -1.04
SF3B3-208ENST00000567250 CACNG7P62955 275 aa8.53□□□□□ -1.04
SF3B3-208ENST00000567250 FHL2Q14192 279 aa8.53□□□□□ -1.04
SF3B3-208ENST00000567250 ADIRFQ15847 76 aa8.53□□□□□ -1.04
SF3B3-208ENST00000567250 LGALS9CQ6DKI2 356 aa8.53□□□□□ -1.04
SF3B3-208ENST00000567250 POM121L12Q8N7R1 296 aa8.53□□□□□ -1.04
SF3B3-208ENST00000567250 OR10AG1Q8NH19 301 aa8.53□□□□□ -1.04
SF3B3-208ENST00000567250 AP1S3Q96PC3 154 aa8.53□□□□□ -1.04
SF3B3-208ENST00000567250 TPPP3Q9BW30 176 aa8.53□□□□□ -1.04
SF3B3-208ENST00000567250 OSTCQ9NRP0 149 aa8.53□□□□□ -1.04
SF3B3-208ENST00000567250 LY6G6CO95867 125 aa8.52□□□□□ -1.05
SF3B3-208ENST00000567250 GZMBP10144 247 aa8.52□□□□□ -1.05
SF3B3-208ENST00000567250 CTRLP40313 264 aa8.52□□□□□ -1.05
SF3B3-208ENST00000567250 CRYBA4P53673 196 aa8.52□□□□□ -1.05
SF3B3-208ENST00000567250 PNRC1Q12796 327 aaPredicted RBP8.52□□□□□ -1.05
SF3B3-208ENST00000567250 RHOHQ15669 191 aa8.52□□□□□ -1.05
SF3B3-208ENST00000567250 FAM74A4Q5TZK3 123 aa8.52□□□□□ -1.05
SF3B3-208ENST00000567250 ZNF575Q86XF7 245 aa8.52□□□□□ -1.05
SF3B3-208ENST00000567250 UBE2DNLQ8IWF7 75 aa8.52□□□□□ -1.05
SF3B3-208ENST00000567250 ISOC2Q96AB3 205 aa8.52□□□□□ -1.05
SF3B3-208ENST00000567250 SFRP2Q96HF1 295 aa8.52□□□□□ -1.05
SF3B3-208ENST00000567250 ICOSQ9Y6W8 199 aa8.52□□□□□ -1.05
SF3B3-208ENST00000567250 TRBV6-4A0A1B0GX49 114 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms