RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 TIRAPP58753 221 aa9.66□□□□□ -0.86
COMMD4-216ENST00000567023 WFDC10BQ8IUB3 73 aa9.66□□□□□ -0.86
COMMD4-216ENST00000567023 Q8N1X5 172 aa9.66□□□□□ -0.86
COMMD4-216ENST00000567023 C9orf62Q8N4C0 152 aa9.66□□□□□ -0.86
COMMD4-216ENST00000567023 TMEM75Q8N9X5 138 aa9.66□□□□□ -0.86
COMMD4-216ENST00000567023 PTH2Q96A98 100 aa9.66□□□□□ -0.86
COMMD4-216ENST00000567023 C11orf21Q9P2W6 132 aa9.66□□□□□ -0.86
COMMD4-216ENST00000567023 PSG8Q9UQ74 426 aa9.66□□□□□ -0.86
COMMD4-216ENST00000567023 GCGP01275 180 aa9.65□□□□□ -0.86
COMMD4-216ENST00000567023 EVI2AP22794 236 aa9.65□□□□□ -0.86
COMMD4-216ENST00000567023 UBE2G2P60604 165 aa9.65□□□□□ -0.86
COMMD4-216ENST00000567023 FLI1Q01543 452 aaPredicted RBP9.65□□□□□ -0.86
COMMD4-216ENST00000567023 ZNF876PQ49A33 203 aa9.65□□□□□ -0.86
COMMD4-216ENST00000567023 EIF5AL1Q6IS14 154 aaKnown RBP9.65□□□□□ -0.86
COMMD4-216ENST00000567023 CDPF1Q6NVV7 123 aa9.65□□□□□ -0.86
COMMD4-216ENST00000567023 SLC51BQ86UW2 128 aa9.65□□□□□ -0.86
COMMD4-216ENST00000567023 SFT2D1Q8WV19 159 aa9.65□□□□□ -0.86
COMMD4-216ENST00000567023 LOC100131303A0A0U1RQF7 123 aa9.64□□□□□ -0.87
COMMD4-216ENST00000567023 EREGO14944 169 aa9.64□□□□□ -0.87
COMMD4-216ENST00000567023 RAB5CP51148 216 aa9.64□□□□□ -0.87
COMMD4-216ENST00000567023 ERVFC1-1P60608 527 aa9.64□□□□□ -0.87
COMMD4-216ENST00000567023 ZFP69Q49AA0 526 aa9.64□□□□□ -0.87
COMMD4-216ENST00000567023 SMUG1Q53HV7 270 aa9.64□□□□□ -0.87
COMMD4-216ENST00000567023 SAPCD1Q5SSQ6 148 aa9.64□□□□□ -0.87
COMMD4-216ENST00000567023 HIST1H2BAQ96A08 127 aa9.64□□□□□ -0.87
COMMD4-216ENST00000567023 C9orf85Q96MD7 179 aa9.64□□□□□ -0.87
COMMD4-216ENST00000567023 TCEAL7Q9BRU2 100 aa9.64□□□□□ -0.87
COMMD4-216ENST00000567023 MSRB1Q9NZV6 116 aa9.64□□□□□ -0.87
COMMD4-216ENST00000567023 A0A087WTM6 91 aa9.63□□□□□ -0.87
COMMD4-216ENST00000567023 TRAV1-1A0A0B4J248 108 aa9.63□□□□□ -0.87
COMMD4-216ENST00000567023 TRBV6-4A0A1B0GX49 114 aa9.63□□□□□ -0.87
COMMD4-216ENST00000567023 PEX7O00628 323 aa9.63□□□□□ -0.87
COMMD4-216ENST00000567023 RS1O15537 224 aa9.63□□□□□ -0.87
COMMD4-216ENST00000567023 IFNA7P01567 189 aa9.63□□□□□ -0.87
COMMD4-216ENST00000567023 H2AFB1P0C5Y9 115 aa9.63□□□□□ -0.87
COMMD4-216ENST00000567023 SULT1A2P50226 295 aa9.63□□□□□ -0.87
COMMD4-216ENST00000567023 CFAP126Q5VTH2 177 aa9.63□□□□□ -0.87
COMMD4-216ENST00000567023 C10orf126Q8N4M7 172 aa9.63□□□□□ -0.87
COMMD4-216ENST00000567023 SLC25A29Q8N8R3 303 aa9.63□□□□□ -0.87
COMMD4-216ENST00000567023 LINC00479Q96M42 142 aa9.63□□□□□ -0.87
COMMD4-216ENST00000567023 BOLA1Q9Y3E2 137 aa9.63□□□□□ -0.87
COMMD4-216ENST00000567023 RNASE3P12724 160 aaKnown RBP9.62□□□□□ -0.87
COMMD4-216ENST00000567023 PRNTQ86SH4 94 aa9.62□□□□□ -0.87
COMMD4-216ENST00000567023 SCRT2Q9NQ03 307 aa9.62□□□□□ -0.87
COMMD4-216ENST00000567023 TRAV34A0A0B4J273 112 aa9.61□□□□□ -0.87
COMMD4-216ENST00000567023 IGHV3-38A0A0C4DH36 116 aa9.61□□□□□ -0.87
COMMD4-216ENST00000567023 PGPEP1LA6NFU8 196 aa9.61□□□□□ -0.87
COMMD4-216ENST00000567023 PAGE4O60829 102 aa9.61□□□□□ -0.87
COMMD4-216ENST00000567023 CRYGDP07320 174 aa9.61□□□□□ -0.87
COMMD4-216ENST00000567023 PPT1P50897 306 aa9.61□□□□□ -0.87
COMMD4-216ENST00000567023 RHOHQ15669 191 aa9.61□□□□□ -0.87
COMMD4-216ENST00000567023 LINC01556Q5JQF7 62 aa9.61□□□□□ -0.87
COMMD4-216ENST00000567023 PIK3CD-AS1Q5SR53 167 aa9.61□□□□□ -0.87
COMMD4-216ENST00000567023 CST9LP1Q5W188 147 aa9.61□□□□□ -0.87
COMMD4-216ENST00000567023 COX8CQ7Z4L0 72 aa9.61□□□□□ -0.87
COMMD4-216ENST00000567023 NHLRC2Q8NBF2 726 aa9.61□□□□□ -0.87
COMMD4-216ENST00000567023 PRADC1Q9BSG0 188 aa9.61□□□□□ -0.87
COMMD4-216ENST00000567023 IGKV3D-20A0A0C4DH25 116 aa9.6□□□□□ -0.87
COMMD4-216ENST00000567023 TRBV6-1A0A0K0K1D8 114 aa9.6□□□□□ -0.87
COMMD4-216ENST00000567023 A0A1B0GV50 99 aa9.6□□□□□ -0.87
COMMD4-216ENST00000567023 MGST1P10620 155 aaKnown RBP9.6□□□□□ -0.87
COMMD4-216ENST00000567023 ZNF506Q5JVG8 444 aa9.6□□□□□ -0.87
COMMD4-216ENST00000567023 Q86TA4 180 aa9.6□□□□□ -0.87
COMMD4-216ENST00000567023 FABP5P3A8MUU1 101 aa9.59□□□□□ -0.87
COMMD4-216ENST00000567023 CCL20P78556 96 aa9.59□□□□□ -0.87
COMMD4-216ENST00000567023 FMC1Q96HJ9 113 aa9.59□□□□□ -0.87
COMMD4-216ENST00000567023 FAT1Q14517 4588 aa9.59□□□□□ -0.87
COMMD4-216ENST00000567023 TRAV8-6A0A0B4J262 113 aa9.58□□□□□ -0.88
COMMD4-216ENST00000567023 IBA57-AS1B1ANH7 110 aa9.58□□□□□ -0.88
COMMD4-216ENST00000567023 FUSP35637 526 aaKnown RBP eCLIP9.58□□□□□ -0.88
COMMD4-216ENST00000567023 ZFP2Q6ZN57 461 aa9.58□□□□□ -0.88
COMMD4-216ENST00000567023 MANBALQ9NQG1 85 aa9.58□□□□□ -0.88
COMMD4-216ENST00000567023 ZFP30Q9Y2G7 519 aa9.58□□□□□ -0.88
COMMD4-216ENST00000567023 IGHV3-73A0A0B4J1V6 119 aa9.57□□□□□ -0.88
COMMD4-216ENST00000567023 A8MWV9 139 aa9.57□□□□□ -0.88
COMMD4-216ENST00000567023 XGP55808 180 aa9.57□□□□□ -0.88
COMMD4-216ENST00000567023 DNLZQ5SXM8 178 aa9.57□□□□□ -0.88
COMMD4-216ENST00000567023 LELP1Q5T871 98 aa9.57□□□□□ -0.88
COMMD4-216ENST00000567023 GTSF1LQ9H1H1 148 aa9.57□□□□□ -0.88
COMMD4-216ENST00000567023 IL36BQ9NZH7 164 aa9.57□□□□□ -0.88
COMMD4-216ENST00000567023 LRCOL1A6NCL2 159 aa9.56□□□□□ -0.88
COMMD4-216ENST00000567023 TEX46H3BTG2 121 aa9.56□□□□□ -0.88
COMMD4-216ENST00000567023 LTAP01374 205 aa9.56□□□□□ -0.88
COMMD4-216ENST00000567023 AKR1C3P42330 323 aa9.56□□□□□ -0.88
COMMD4-216ENST00000567023 CRIP1P50238 77 aa9.56□□□□□ -0.88
COMMD4-216ENST00000567023 NKX2-5P52952 324 aaPredicted RBP9.56□□□□□ -0.88
COMMD4-216ENST00000567023 UBE2G1P62253 170 aa9.56□□□□□ -0.88
COMMD4-216ENST00000567023 OR10J3Q5JRS4 329 aa9.56□□□□□ -0.88
COMMD4-216ENST00000567023 ATP6V0E2Q8NHE4 81 aa9.56□□□□□ -0.88
COMMD4-216ENST00000567023 ZC2HC1AQ96GY0 325 aa9.56□□□□□ -0.88
COMMD4-216ENST00000567023 PARLQ9H300 379 aa9.56□□□□□ -0.88
COMMD4-216ENST00000567023 SCO2A0A1W2PP80 73 aa9.55□□□□□ -0.88
COMMD4-216ENST00000567023 S100A9P06702 114 aaKnown RBP9.55□□□□□ -0.88
COMMD4-216ENST00000567023 S100A4P26447 101 aaKnown RBP9.55□□□□□ -0.88
COMMD4-216ENST00000567023 ASIPP42127 132 aa9.55□□□□□ -0.88
COMMD4-216ENST00000567023 UFSP1Q6NVU6 142 aa9.55□□□□□ -0.88
COMMD4-216ENST00000567023 Q6ZSN1 163 aa9.55□□□□□ -0.88
COMMD4-216ENST00000567023 C11orf52Q96A22 123 aa9.55□□□□□ -0.88
COMMD4-216ENST00000567023 GNG13Q9P2W3 67 aa9.55□□□□□ -0.88
COMMD4-216ENST00000567023 KRBOX1C9JBD0 128 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms