RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 ZC2HC1BQ5TFG8 222 aa12.69□□□□□ -0.38
CMTM3-213ENST00000566756 SAMD13Q5VXD3 122 aa12.69□□□□□ -0.38
CMTM3-213ENST00000566756 OR5A1Q8NGJ0 315 aa12.69□□□□□ -0.38
CMTM3-213ENST00000566756 Q96MF0 132 aa12.69□□□□□ -0.38
CMTM3-213ENST00000566756 H3BUT2 72 aa12.69□□□□□ -0.38
CMTM3-213ENST00000566756 K7ERU9 68 aa12.69□□□□□ -0.38
CMTM3-213ENST00000566756 TAL2Q16559 108 aa12.69□□□□□ -0.38
CMTM3-213ENST00000566756 MAPK1IP1LQ8NDC0 245 aa12.69□□□□□ -0.38
CMTM3-213ENST00000566756 JMJD8Q96S16 334 aa12.69□□□□□ -0.38
CMTM3-213ENST00000566756 CHAC1Q9BUX1 264 aa12.69□□□□□ -0.38
CMTM3-213ENST00000566756 DPH3P1Q9H4G8 78 aa12.69□□□□□ -0.38
CMTM3-213ENST00000566756 CSMD2Q7Z408 3487 aa12.68□□□□□ -0.38
CMTM3-213ENST00000566756 H3BUX3 64 aa12.68□□□□□ -0.38
CMTM3-213ENST00000566756 FSHBP01225 129 aa12.68□□□□□ -0.38
CMTM3-213ENST00000566756 SMIM13P0DJ93 91 aa12.68□□□□□ -0.38
CMTM3-213ENST00000566756 ASIPP42127 132 aa12.68□□□□□ -0.38
CMTM3-213ENST00000566756 UNQ9165/PRO28630Q6UXU0 137 aa12.68□□□□□ -0.38
CMTM3-213ENST00000566756 TM2D2Q9BX73 214 aa12.68□□□□□ -0.38
CMTM3-213ENST00000566756 MRPL35Q9NZE8 188 aaKnown RBP12.68□□□□□ -0.38
CMTM3-213ENST00000566756 TRBV25-1A0A075B6N4 114 aa12.67□□□□□ -0.38
CMTM3-213ENST00000566756 TRAV26-2A0A0B4J265 109 aa12.67□□□□□ -0.38
CMTM3-213ENST00000566756 A0A1W2PPM0 123 aa12.67□□□□□ -0.38
CMTM3-213ENST00000566756 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.67□□□□□ -0.38
CMTM3-213ENST00000566756 CREBBPQ92793 2442 aa12.67□□□□□ -0.38
CMTM3-213ENST00000566756 TCTAP57738 103 aa12.67□□□□□ -0.38
CMTM3-213ENST00000566756 SUMO2P61956 95 aaKnown RBP12.67□□□□□ -0.38
CMTM3-213ENST00000566756 ZNF580Q9UK33 172 aa12.67□□□□□ -0.38
CMTM3-213ENST00000566756 Q6ZQT7 251 aa12.66□□□□□ -0.38
CMTM3-213ENST00000566756 GTSCR1Q86UQ5 136 aa12.66□□□□□ -0.38
CMTM3-213ENST00000566756 POM121L12Q8N7R1 296 aa12.66□□□□□ -0.38
CMTM3-213ENST00000566756 TOMM6Q96B49 74 aa12.66□□□□□ -0.38
CMTM3-213ENST00000566756 SVEP1Q4LDE5 3571 aa12.66□□□□□ -0.38
CMTM3-213ENST00000566756 F8VRH5 84 aa12.65□□□□□ -0.38
CMTM3-213ENST00000566756 LINC01619G3V211 115 aa12.65□□□□□ -0.38
CMTM3-213ENST00000566756 H7C1H1 209 aa12.65□□□□□ -0.38
CMTM3-213ENST00000566756 TRBV12-3P01733 135 aa12.65□□□□□ -0.38
CMTM3-213ENST00000566756 HIST2H2BCQ6DN03 193 aa12.65□□□□□ -0.38
CMTM3-213ENST00000566756 TMEM160Q9NX00 188 aa12.65□□□□□ -0.38
CMTM3-213ENST00000566756 LINC00527Q9UJ94 153 aa12.65□□□□□ -0.38
CMTM3-213ENST00000566756 LINC01549A6NIU2 74 aa12.65□□□□□ -0.38
CMTM3-213ENST00000566756 NXPH4O95158 308 aa12.65□□□□□ -0.38
CMTM3-213ENST00000566756 S100A4P26447 101 aaKnown RBP12.65□□□□□ -0.38
CMTM3-213ENST00000566756 RASL10AQ92737 203 aa12.65□□□□□ -0.38
CMTM3-213ENST00000566756 PHLDA3Q9Y5J5 127 aa12.65□□□□□ -0.38
CMTM3-213ENST00000566756 IGLV1-40P01703 118 aa12.64□□□□□ -0.39
CMTM3-213ENST00000566756 FABP2P12104 132 aa12.64□□□□□ -0.39
CMTM3-213ENST00000566756 LY6EQ16553 131 aa12.64□□□□□ -0.39
CMTM3-213ENST00000566756 CEND1Q8N111 149 aa12.64□□□□□ -0.39
CMTM3-213ENST00000566756 GCSHP23434 173 aa12.63□□□□□ -0.39
CMTM3-213ENST00000566756 FXYD2P54710 66 aa12.63□□□□□ -0.39
CMTM3-213ENST00000566756 RPL32P62910 135 aaKnown RBP12.63□□□□□ -0.39
CMTM3-213ENST00000566756 DEFB112Q30KQ8 113 aa12.63□□□□□ -0.39
CMTM3-213ENST00000566756 ANXA2RQ3ZCQ2 193 aa12.63□□□□□ -0.39
CMTM3-213ENST00000566756 K7EMT4 169 aa12.63□□□□□ -0.39
CMTM3-213ENST00000566756 SPCS1Q9Y6A9 102 aa12.63□□□□□ -0.39
CMTM3-213ENST00000566756 RNF151Q2KHN1 245 aa12.62□□□□□ -0.39
CMTM3-213ENST00000566756 SAMD5Q5TGI4 173 aa12.62□□□□□ -0.39
CMTM3-213ENST00000566756 PHLDA1Q8WV24 401 aaPredicted RBP12.62□□□□□ -0.39
CMTM3-213ENST00000566756 DAZ1Q9NQZ3 744 aaKnown RBP12.62□□□□□ -0.39
CMTM3-213ENST00000566756 CELSR1Q9NYQ6 3014 aa12.62□□□□□ -0.39
CMTM3-213ENST00000566756 NEXN-AS1Q8NBZ9 246 aa12.61□□□□□ -0.39
CMTM3-213ENST00000566756 RAB37Q96AX2 223 aa12.61□□□□□ -0.39
CMTM3-213ENST00000566756 SCGB3A1Q96QR1 104 aa12.61□□□□□ -0.39
CMTM3-213ENST00000566756 RHPN1-AS1Q9BWJ2 59 aa12.61□□□□□ -0.39
CMTM3-213ENST00000566756 ID1P41134 155 aa12.61□□□□□ -0.39
CMTM3-213ENST00000566756 CFHR3Q02985 330 aa12.61□□□□□ -0.39
CMTM3-213ENST00000566756 TTTY13Q9BZ97 58 aa12.61□□□□□ -0.39
CMTM3-213ENST00000566756 KLLNB2CW77 178 aa12.6□□□□□ -0.39
CMTM3-213ENST00000566756 PF4V1P10720 104 aa12.6□□□□□ -0.39
CMTM3-213ENST00000566756 RNASE3P12724 160 aaKnown RBP12.6□□□□□ -0.39
CMTM3-213ENST00000566756 NEGR1Q7Z3B1 354 aa12.6□□□□□ -0.39
CMTM3-213ENST00000566756 VPS25Q9BRG1 176 aa12.6□□□□□ -0.39
CMTM3-213ENST00000566756 CHTOPQ9Y3Y2 248 aaKnown RBP12.6□□□□□ -0.39
CMTM3-213ENST00000566756 ZANQ9Y493 2812 aa12.6□□□□□ -0.39
CMTM3-213ENST00000566756 IGHV4OR15-8A0A075B7B6 117 aa12.6□□□□□ -0.39
CMTM3-213ENST00000566756 NBPF19A0A087WUL8 3843 aa12.6□□□□□ -0.39
CMTM3-213ENST00000566756 A0A087WW49 117 aa12.6□□□□□ -0.39
CMTM3-213ENST00000566756 RNASE4P34096 147 aaKnown RBP12.6□□□□□ -0.39
CMTM3-213ENST00000566756 C14orf178Q8N769 122 aaPredicted RBP12.6□□□□□ -0.39
CMTM3-213ENST00000566756 WFDC11Q8NEX6 87 aa12.6□□□□□ -0.39
CMTM3-213ENST00000566756 KLK15Q9H2R5 256 aa12.6□□□□□ -0.39
CMTM3-213ENST00000566756 RPL11P62913 178 aaKnown RBP12.59□□□□□ -0.39
CMTM3-213ENST00000566756 BLCAPP62952 87 aa12.58□□□□□ -0.4
CMTM3-213ENST00000566756 Q6YL49 198 aa12.58□□□□□ -0.4
CMTM3-213ENST00000566756 TEX29Q8N6K0 151 aa12.58□□□□□ -0.4
CMTM3-213ENST00000566756 MAPKAPK5-AS1Q8N8E1 139 aa12.58□□□□□ -0.4
CMTM3-213ENST00000566756 ITPR3Q14573 2671 aa12.58□□□□□ -0.4
CMTM3-213ENST00000566756 J3KRW8 73 aa12.58□□□□□ -0.4
CMTM3-213ENST00000566756 IGHV3-11P01762 117 aa12.58□□□□□ -0.4
CMTM3-213ENST00000566756 IGHV4-59P01825 116 aa12.58□□□□□ -0.4
CMTM3-213ENST00000566756 TM4SF20Q53R12 229 aa12.58□□□□□ -0.4
CMTM3-213ENST00000566756 C2orf66Q6UXQ4 117 aa12.58□□□□□ -0.4
CMTM3-213ENST00000566756 RPL39LQ96EH5 51 aaKnown RBP12.58□□□□□ -0.4
CMTM3-213ENST00000566756 ODF3Q96PU9 254 aa12.58□□□□□ -0.4
CMTM3-213ENST00000566756 KIF25-AS1Q9Y6Z4 181 aa12.58□□□□□ -0.4
CMTM3-213ENST00000566756 PDZD2O15018 2839 aa12.57□□□□□ -0.4
CMTM3-213ENST00000566756 OR11H12B2RN74 326 aa12.57□□□□□ -0.4
CMTM3-213ENST00000566756 OR11H1Q8NG94 326 aa12.57□□□□□ -0.4
CMTM3-213ENST00000566756 OR11H2Q8NH07 326 aa12.57□□□□□ -0.4
CMTM3-213ENST00000566756 NAA38Q9BRA0 125 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms