RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 FAM159AQ6UWV7 190 aa12.98□□□□□ -0.33
HERC2-208ENST00000566635 SSBP4Q9BWG4 385 aaPredicted RBP12.98□□□□□ -0.33
HERC2-208ENST00000566635 GNB1LQ9BYB4 327 aa12.98□□□□□ -0.33
HERC2-208ENST00000566635 MRPL18Q9H0U6 180 aaKnown RBP12.98□□□□□ -0.33
HERC2-208ENST00000566635 TIMM8BQ9Y5J9 83 aaPredicted RBP12.98□□□□□ -0.33
HERC2-208ENST00000566635 WDR73Q6P4I2 378 aa12.97□□□□□ -0.33
HERC2-208ENST00000566635 RASL11AQ6T310 242 aa12.97□□□□□ -0.33
HERC2-208ENST00000566635 SPRY2O43597 315 aa12.97□□□□□ -0.33
HERC2-208ENST00000566635 RPL35AP18077 110 aaKnown RBP12.97□□□□□ -0.33
HERC2-208ENST00000566635 GTSCR1Q86UQ5 136 aa12.97□□□□□ -0.33
HERC2-208ENST00000566635 ZNF664Q8N3J9 261 aa12.97□□□□□ -0.33
HERC2-208ENST00000566635 BORCS7Q96B45 105 aa12.97□□□□□ -0.33
HERC2-208ENST00000566635 TP53TG3Q9ULZ0 132 aa12.97□□□□□ -0.33
HERC2-208ENST00000566635 RIGQ13278 110 aa12.96□□□□□ -0.33
HERC2-208ENST00000566635 OR10AG1Q8NH19 301 aa12.96□□□□□ -0.33
HERC2-208ENST00000566635 XCL2Q9UBD3 114 aa12.96□□□□□ -0.33
HERC2-208ENST00000566635 WIPF1O43516 503 aa12.95□□□□□ -0.34
HERC2-208ENST00000566635 AMBPP02760 352 aa12.95□□□□□ -0.34
HERC2-208ENST00000566635 ASIPP42127 132 aa12.95□□□□□ -0.34
HERC2-208ENST00000566635 SLAQ13239 276 aa12.95□□□□□ -0.34
HERC2-208ENST00000566635 IGHV1OR15-1A0A075B7D0 117 aa12.95□□□□□ -0.34
HERC2-208ENST00000566635 HLA-DQA1P01909 254 aa12.95□□□□□ -0.34
HERC2-208ENST00000566635 COX19Q49B96 90 aa12.95□□□□□ -0.34
HERC2-208ENST00000566635 SNAI2O43623 268 aa12.94□□□□□ -0.34
HERC2-208ENST00000566635 INSP01308 110 aa12.94□□□□□ -0.34
HERC2-208ENST00000566635 MT-ND6P03923 174 aa12.94□□□□□ -0.34
HERC2-208ENST00000566635 RNASE3P12724 160 aaKnown RBP12.94□□□□□ -0.34
HERC2-208ENST00000566635 S100A4P26447 101 aaKnown RBP12.94□□□□□ -0.34
HERC2-208ENST00000566635 TDRG1Q3Y452 100 aa12.94□□□□□ -0.34
HERC2-208ENST00000566635 OXLD1Q5BKU9 147 aa12.94□□□□□ -0.34
HERC2-208ENST00000566635 KCNS1Q96KK3 526 aa12.94□□□□□ -0.34
HERC2-208ENST00000566635 CNFNQ9BYD5 112 aa12.94□□□□□ -0.34
HERC2-208ENST00000566635 MSRB1Q9NZV6 116 aa12.94□□□□□ -0.34
HERC2-208ENST00000566635 OR5AL1P0C617 328 aa12.94□□□□□ -0.34
HERC2-208ENST00000566635 NTF3P20783 257 aa12.94□□□□□ -0.34
HERC2-208ENST00000566635 KIAA1644Q3SXP7 199 aa12.94□□□□□ -0.34
HERC2-208ENST00000566635 Q8N1Y9 231 aa12.94□□□□□ -0.34
HERC2-208ENST00000566635 F2Z2F3 143 aa12.93□□□□□ -0.34
HERC2-208ENST00000566635 PRM2P04554 102 aa12.93□□□□□ -0.34
HERC2-208ENST00000566635 RAB4AP20338 218 aa12.93□□□□□ -0.34
HERC2-208ENST00000566635 TWIST1Q15672 202 aa12.93□□□□□ -0.34
HERC2-208ENST00000566635 GIG44P09565 113 aaPredicted RBP12.92□□□□□ -0.34
HERC2-208ENST00000566635 HTN1P15515 57 aa12.92□□□□□ -0.34
HERC2-208ENST00000566635 MDFIQ99750 246 aa12.92□□□□□ -0.34
HERC2-208ENST00000566635 APCSP02743 223 aa12.92□□□□□ -0.34
HERC2-208ENST00000566635 IGHV3-16A0A0C4DH30 117 aa12.91□□□□□ -0.34
HERC2-208ENST00000566635 SCRT2Q9NQ03 307 aa12.91□□□□□ -0.34
HERC2-208ENST00000566635 MDFICQ9P1T7 246 aa12.91□□□□□ -0.34
HERC2-208ENST00000566635 A0A1B0GW15 77 aa12.91□□□□□ -0.34
HERC2-208ENST00000566635 CBY3A6NI87 242 aa12.91□□□□□ -0.34
HERC2-208ENST00000566635 GATD1Q8NB37 220 aa12.91□□□□□ -0.34
HERC2-208ENST00000566635 EREGO14944 169 aa12.9□□□□□ -0.34
HERC2-208ENST00000566635 MED14OSP0DP75 135 aa12.9□□□□□ -0.34
HERC2-208ENST00000566635 SPANXN1Q5VSR9 72 aa12.9□□□□□ -0.34
HERC2-208ENST00000566635 C1orf158Q8N1D5 194 aa12.9□□□□□ -0.34
HERC2-208ENST00000566635 LINC01587Q99440 93 aa12.9□□□□□ -0.34
HERC2-208ENST00000566635 M0R381 172 aa12.89□□□□□ -0.35
HERC2-208ENST00000566635 MRPL52Q86TS9 123 aaKnown RBP12.89□□□□□ -0.35
HERC2-208ENST00000566635 PHLDA3Q9Y5J5 127 aa12.89□□□□□ -0.35
HERC2-208ENST00000566635 MUC4Q99102 2169 aa12.89□□□□□ -0.35
HERC2-208ENST00000566635 IGHV3OR16-12A0A075B7B8 117 aa12.89□□□□□ -0.35
HERC2-208ENST00000566635 ZNF493Q6ZR52 646 aa12.89□□□□□ -0.35
HERC2-208ENST00000566635 C20orf144Q9BQM9 153 aa12.89□□□□□ -0.35
HERC2-208ENST00000566635 C9orf85Q96MD7 179 aa12.88□□□□□ -0.35
HERC2-208ENST00000566635 TMEM208Q9BTX3 173 aa12.88□□□□□ -0.35
HERC2-208ENST00000566635 TRGV11A0A075B6L2 103 aa12.88□□□□□ -0.35
HERC2-208ENST00000566635 IGHV4-4A0A075B6R2 117 aa12.88□□□□□ -0.35
HERC2-208ENST00000566635 KRTAP10-11P60412 298 aa12.88□□□□□ -0.35
HERC2-208ENST00000566635 CACNG7P62955 275 aa12.88□□□□□ -0.35
HERC2-208ENST00000566635 AMN1Q8IY45 258 aa12.88□□□□□ -0.35
HERC2-208ENST00000566635 SNHG12Q9BXW3 62 aa12.88□□□□□ -0.35
HERC2-208ENST00000566635 SRIP30626 198 aa12.87□□□□□ -0.35
HERC2-208ENST00000566635 MORN3Q6PF18 240 aaPredicted RBP12.87□□□□□ -0.35
HERC2-208ENST00000566635 LOC102724200A0A096LPH7 203 aaPredicted RBP12.86□□□□□ -0.35
HERC2-208ENST00000566635 M0R143 59 aa12.86□□□□□ -0.35
HERC2-208ENST00000566635 IQCJQ1A5X6 159 aa12.86□□□□□ -0.35
HERC2-208ENST00000566635 DMRTA1Q5VZB9 504 aa12.86□□□□□ -0.35
HERC2-208ENST00000566635 TMEM191AQ9H0A3 160 aa12.86□□□□□ -0.35
HERC2-208ENST00000566635 DNAH3Q8TD57 4116 aa12.85□□□□□ -0.35
HERC2-208ENST00000566635 NXPH4O95158 308 aa12.85□□□□□ -0.35
HERC2-208ENST00000566635 EVI2AP22794 236 aa12.85□□□□□ -0.35
HERC2-208ENST00000566635 GAGE1Q13065 139 aa12.85□□□□□ -0.35
HERC2-208ENST00000566635 TMEM18Q96B42 140 aa12.85□□□□□ -0.35
HERC2-208ENST00000566635 LINC00467Q9BRT7 94 aa12.85□□□□□ -0.35
HERC2-208ENST00000566635 KIR2DL5BA0A0G2JN68 375 aa12.85□□□□□ -0.35
HERC2-208ENST00000566635 KIR2DL5BA0A0G2JPC4 375 aa12.85□□□□□ -0.35
HERC2-208ENST00000566635 FAM104BQ5XKR9 115 aa12.85□□□□□ -0.35
HERC2-208ENST00000566635 KIR2DL5AQ8N109 375 aa12.85□□□□□ -0.35
HERC2-208ENST00000566635 CSNK1G2-AS1Q8NCQ2 148 aa12.85□□□□□ -0.35
HERC2-208ENST00000566635 G3V4G9 280 aa12.84□□□□□ -0.35
HERC2-208ENST00000566635 AZU1P20160 251 aa12.84□□□□□ -0.35
HERC2-208ENST00000566635 TMEM256Q8N2U0 113 aa12.84□□□□□ -0.35
HERC2-208ENST00000566635 C1QTNF4Q9BXJ3 329 aa12.84□□□□□ -0.35
HERC2-208ENST00000566635 CSTL1Q9H114 145 aa12.84□□□□□ -0.35
HERC2-208ENST00000566635 EGFEM1PQ0D2K5 195 aa12.83□□□□□ -0.35
HERC2-208ENST00000566635 RNF185Q96GF1 192 aa12.83□□□□□ -0.35
HERC2-208ENST00000566635 ALKBH7Q9BT30 221 aaPredicted RBP12.83□□□□□ -0.35
HERC2-208ENST00000566635 MRPL51Q4U2R6 128 aaKnown RBP12.83□□□□□ -0.36
HERC2-208ENST00000566635 C11orf72Q8NBR9 251 aa12.83□□□□□ -0.36
HERC2-208ENST00000566635 GOLT1BQ9Y3E0 138 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms