RNA–Protein interactions for RNA: ENST00000566613.1

GDPD3-205, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, human

TSL 5

Gene GDPD3, Length 235 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GDPD3-205	ENST00000566613	RPUSD1	Q9UJJ7	312 aa	Known RBP	4.28	□□□□□ -1.72
GDPD3-205	ENST00000566613	SMIM26	A0A096LP01	95 aa		4.27	□□□□□ -1.73
GDPD3-205	ENST00000566613	TRGV5	A0A0B4J1U4	118 aa		4.27	□□□□□ -1.73
GDPD3-205	ENST00000566613	BUB3	O43684	328 aa		4.27	□□□□□ -1.73
GDPD3-205	ENST00000566613	CGB3	P0DN86	165 aa		4.27	□□□□□ -1.73
GDPD3-205	ENST00000566613	CGB7	P0DN87	165 aa		4.27	□□□□□ -1.73
GDPD3-205	ENST00000566613	CCL3	P10147	92 aa		4.27	□□□□□ -1.73
GDPD3-205	ENST00000566613	EGR2	P11161	476 aa	Predicted RBP	4.27	□□□□□ -1.73
GDPD3-205	ENST00000566613	TSPEAR-AS2	P59090	65 aa		4.27	□□□□□ -1.73
GDPD3-205	ENST00000566613	LYZ	P61626	148 aa		4.27	□□□□□ -1.73
GDPD3-205	ENST00000566613	WT1-AS	Q06250	92 aa		4.27	□□□□□ -1.73
GDPD3-205	ENST00000566613	ATP5EP2	Q5VTU8	51 aa		4.27	□□□□□ -1.73
GDPD3-205	ENST00000566613	C2orf66	Q6UXQ4	117 aa		4.27	□□□□□ -1.73
GDPD3-205	ENST00000566613	DEFB132	Q7Z7B7	95 aa		4.27	□□□□□ -1.73
GDPD3-205	ENST00000566613	C1orf158	Q8N1D5	194 aa		4.27	□□□□□ -1.73
GDPD3-205	ENST00000566613	SLC25A45	Q8N413	288 aa		4.27	□□□□□ -1.73
GDPD3-205	ENST00000566613	CD177	Q8N6Q3	437 aa		4.27	□□□□□ -1.73
GDPD3-205	ENST00000566613	VSIG2	Q96IQ7	327 aa		4.27	□□□□□ -1.73
GDPD3-205	ENST00000566613	TIMM17A	Q99595	171 aa		4.27	□□□□□ -1.73
GDPD3-205	ENST00000566613	TIMM21	Q9BVV7	248 aa		4.27	□□□□□ -1.73
GDPD3-205	ENST00000566613	MRPL36	Q9P0J6	103 aa	Known RBP	4.27	□□□□□ -1.73
GDPD3-205	ENST00000566613	PRRC2A	P48634	2157 aa	Known RBP	4.27	□□□□□ -1.73
GDPD3-205	ENST00000566613	SRRM5	B3KS81	715 aa		4.26	□□□□□ -1.73
GDPD3-205	ENST00000566613	TMEM178B	H3BS89	294 aa		4.26	□□□□□ -1.73
GDPD3-205	ENST00000566613		H3BTX0	84 aa		4.26	□□□□□ -1.73
GDPD3-205	ENST00000566613	NBR2	O15453	112 aa		4.26	□□□□□ -1.73
GDPD3-205	ENST00000566613	BCE1	O60756	84 aa		4.26	□□□□□ -1.73
GDPD3-205	ENST00000566613	WT1	P19544	449 aa	Predicted RBP	4.26	□□□□□ -1.73
GDPD3-205	ENST00000566613	DLX1	P56177	255 aa		4.26	□□□□□ -1.73
GDPD3-205	ENST00000566613	C17orf58	Q2M2W7	97 aa		4.26	□□□□□ -1.73
GDPD3-205	ENST00000566613		Q6ZT83	130 aa		4.26	□□□□□ -1.73
GDPD3-205	ENST00000566613	CYSTM1	Q9H1C7	97 aa		4.26	□□□□□ -1.73
GDPD3-205	ENST00000566613	SLC25A15	Q9Y619	301 aa		4.26	□□□□□ -1.73
GDPD3-205	ENST00000566613	TRAV41	A0A0B4J266	112 aa		4.25	□□□□□ -1.73
GDPD3-205	ENST00000566613	IGHV1OR15-9	A0A0B4J2B8	117 aa		4.25	□□□□□ -1.73
GDPD3-205	ENST00000566613	KRTAP23-1	A1A580	65 aa		4.25	□□□□□ -1.73
GDPD3-205	ENST00000566613	CGB1	A6NKQ9	187 aa		4.25	□□□□□ -1.73
GDPD3-205	ENST00000566613	KNCN	A6PVL3	124 aa		4.25	□□□□□ -1.73
GDPD3-205	ENST00000566613	IGHV1-69	P01742	117 aa		4.25	□□□□□ -1.73
GDPD3-205	ENST00000566613	IGHG2	P01859	326 aa		4.25	□□□□□ -1.73
GDPD3-205	ENST00000566613	GATA1	P15976	413 aa	Predicted RBP	4.25	□□□□□ -1.73
GDPD3-205	ENST00000566613	BEAN1	Q3B7T3	259 aa		4.25	□□□□□ -1.73
GDPD3-205	ENST00000566613	PRR14L	Q5THK1	2151 aa		4.25	□□□□□ -1.73
GDPD3-205	ENST00000566613	DNAH12	Q6ZR08	3092 aa		4.25	□□□□□ -1.73
GDPD3-205	ENST00000566613	CNTRL	Q7Z7A1	2325 aa		4.25	□□□□□ -1.73
GDPD3-205	ENST00000566613	APRG1	Q8IVJ8	170 aa		4.25	□□□□□ -1.73
GDPD3-205	ENST00000566613	LINC00311	Q8N616	119 aa		4.25	□□□□□ -1.73
GDPD3-205	ENST00000566613	DCTN5	Q9BTE1	182 aa		4.25	□□□□□ -1.73
GDPD3-205	ENST00000566613	PKIG	Q9Y2B9	76 aa		4.25	□□□□□ -1.73
GDPD3-205	ENST00000566613	PI4KA	P42356	2102 aa		4.25	□□□□□ -1.73
GDPD3-205	ENST00000566613	COL27A1	Q8IZC6	1860 aa	Predicted RBP	4.24	□□□□□ -1.73
GDPD3-205	ENST00000566613	IGHV1OR21-1	A0A087WYE8	117 aa		4.24	□□□□□ -1.73
GDPD3-205	ENST00000566613		A0A0J9YXY3	114 aa		4.24	□□□□□ -1.73
GDPD3-205	ENST00000566613	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	4.24	□□□□□ -1.73
GDPD3-205	ENST00000566613	USP17L23	D6RBM5	183 aa		4.24	□□□□□ -1.73
GDPD3-205	ENST00000566613		H7C2G1	150 aa		4.24	□□□□□ -1.73
GDPD3-205	ENST00000566613	TIMM17B	O60830	172 aa		4.24	□□□□□ -1.73
GDPD3-205	ENST00000566613	GAS8-AS1	O95177	125 aa		4.24	□□□□□ -1.73
GDPD3-205	ENST00000566613	IGLV3-19	P01714	112 aa		4.24	□□□□□ -1.73
GDPD3-205	ENST00000566613	IGKV1-16	P04430	117 aa		4.24	□□□□□ -1.73
GDPD3-205	ENST00000566613	IGHV4-34	P06331	123 aa		4.24	□□□□□ -1.73
GDPD3-205	ENST00000566613	EDN2	P20800	178 aa		4.24	□□□□□ -1.73
GDPD3-205	ENST00000566613	DEFB103A	P81534	67 aa		4.24	□□□□□ -1.73
GDPD3-205	ENST00000566613	ZNF876P	Q49A33	203 aa		4.24	□□□□□ -1.73
GDPD3-205	ENST00000566613	MUSTN1	Q8IVN3	82 aa		4.24	□□□□□ -1.73
GDPD3-205	ENST00000566613	TMEM61	Q8N0U2	210 aa		4.24	□□□□□ -1.73
GDPD3-205	ENST00000566613	ZNF491	Q8N8L2	437 aa		4.24	□□□□□ -1.73
GDPD3-205	ENST00000566613	KLHL30-AS1	Q8NEE0	82 aa		4.24	□□□□□ -1.73
GDPD3-205	ENST00000566613	OVOL2	Q9BRP0	275 aa		4.24	□□□□□ -1.73
GDPD3-205	ENST00000566613	TMEM243	Q9BU79	118 aa		4.24	□□□□□ -1.73
GDPD3-205	ENST00000566613	C16orf95	Q9H693	158 aa		4.24	□□□□□ -1.73
GDPD3-205	ENST00000566613	MSRB1	Q9NZV6	116 aa		4.24	□□□□□ -1.73
GDPD3-205	ENST00000566613	MALRD1	Q5VYJ5	2156 aa		4.24	□□□□□ -1.73
GDPD3-205	ENST00000566613	IGKV1D-17	A0A075B6S4	117 aa		4.23	□□□□□ -1.73
GDPD3-205	ENST00000566613	IGHV7-4-1	A0A0J9YVY3	117 aa		4.23	□□□□□ -1.73
GDPD3-205	ENST00000566613	COX7A2L	O14548	114 aa		4.23	□□□□□ -1.73
GDPD3-205	ENST00000566613	ENSA	O43768	121 aa	Known RBP	4.23	□□□□□ -1.73
GDPD3-205	ENST00000566613	IGLV2-23	P01705	113 aa		4.23	□□□□□ -1.73
GDPD3-205	ENST00000566613	IGHV3-9	P01782	118 aa		4.23	□□□□□ -1.73
GDPD3-205	ENST00000566613	TRGV3	P03979	118 aa		4.23	□□□□□ -1.73
GDPD3-205	ENST00000566613	RPL27A	P46776	148 aa	Known RBP	4.23	□□□□□ -1.73
GDPD3-205	ENST00000566613	UBE2E1	P51965	193 aa		4.23	□□□□□ -1.73
GDPD3-205	ENST00000566613	CFHR3	Q02985	330 aa		4.23	□□□□□ -1.73
GDPD3-205	ENST00000566613	MIA	Q16674	131 aa		4.23	□□□□□ -1.73
GDPD3-205	ENST00000566613	S100A7L2	Q5SY68	101 aa		4.23	□□□□□ -1.73
GDPD3-205	ENST00000566613	ZNF826P	Q6ZT77	177 aa		4.23	□□□□□ -1.73
GDPD3-205	ENST00000566613	C14orf178	Q8N769	122 aa	Predicted RBP	4.23	□□□□□ -1.73
GDPD3-205	ENST00000566613	C10orf105	Q8TEF2	133 aa		4.23	□□□□□ -1.73
GDPD3-205	ENST00000566613	LAMTOR3	Q9UHA4	124 aa		4.23	□□□□□ -1.73
GDPD3-205	ENST00000566613	SVIL	O95425	2214 aa		4.23	□□□□□ -1.73
GDPD3-205	ENST00000566613	DOCK10	Q96BY6	2186 aa		4.23	□□□□□ -1.73
GDPD3-205	ENST00000566613	NACA	E9PAV3	2078 aa		4.22	□□□□□ -1.73
GDPD3-205	ENST00000566613	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	4.22	□□□□□ -1.73
GDPD3-205	ENST00000566613	IGIP	A6NJ69	53 aa		4.22	□□□□□ -1.73
GDPD3-205	ENST00000566613	PATE3	B3GLJ2	98 aa		4.22	□□□□□ -1.73
GDPD3-205	ENST00000566613	LMO7DN	F2Z398	122 aa		4.22	□□□□□ -1.73
GDPD3-205	ENST00000566613		I3L3M4	83 aa		4.22	□□□□□ -1.73
GDPD3-205	ENST00000566613	NTN3	O00634	580 aa	Predicted RBP	4.22	□□□□□ -1.73
GDPD3-205	ENST00000566613	SCRG1	O75711	98 aa		4.22	□□□□□ -1.73
GDPD3-205	ENST00000566613	DNAL4	O96015	105 aa		4.22	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms