RNA–Protein interactions for RNA: ENST00000566582.1

LINC01541-201, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 2

Gene LINC01541, Length 2,414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-201ENST00000566582 KLHL30-AS1Q8NEE0 82 aa6.56□□□□□ -1.36
LINC01541-201ENST00000566582 C18orf15Q96N68 181 aa6.56□□□□□ -1.36
LINC01541-201ENST00000566582 YAE1D1Q9NRH1 226 aa6.56□□□□□ -1.36
LINC01541-201ENST00000566582 FLNAP21333 2647 aaKnown RBP6.56□□□□□ -1.36
LINC01541-201ENST00000566582 TRAV12-2A0A075B6T6 113 aa6.55□□□□□ -1.36
LINC01541-201ENST00000566582 NBPF19A0A087WUL8 3843 aa6.55□□□□□ -1.36
LINC01541-201ENST00000566582 C7orf71A4D174 169 aa6.55□□□□□ -1.36
LINC01541-201ENST00000566582 LINC01545Q5VT33 79 aa6.55□□□□□ -1.36
LINC01541-201ENST00000566582 TMEM86BQ8N661 226 aa6.55□□□□□ -1.36
LINC01541-201ENST00000566582 C4orf3Q8WVX3 66 aa6.55□□□□□ -1.36
LINC01541-201ENST00000566582 PEMTQ9UBM1 199 aa6.55□□□□□ -1.36
LINC01541-201ENST00000566582 RNASE3P12724 160 aaKnown RBP6.55□□□□□ -1.36
LINC01541-201ENST00000566582 SPINK13Q1W4C9 94 aa6.55□□□□□ -1.36
LINC01541-201ENST00000566582 Q6ZSV7 163 aa6.55□□□□□ -1.36
LINC01541-201ENST00000566582 C11orf44Q8N8P7 122 aa6.55□□□□□ -1.36
LINC01541-201ENST00000566582 OR1N2Q8NGR9 330 aa6.55□□□□□ -1.36
LINC01541-201ENST00000566582 IFI27L1Q96BM0 104 aa6.55□□□□□ -1.36
LINC01541-201ENST00000566582 DPH3P1Q9H4G8 78 aa6.55□□□□□ -1.36
LINC01541-201ENST00000566582 ZNF469Q96JG9 3925 aaPredicted RBP6.54□□□□□ -1.36
LINC01541-201ENST00000566582 SMIM17P0DL12 118 aa6.54□□□□□ -1.36
LINC01541-201ENST00000566582 MED14OSP0DP75 135 aa6.54□□□□□ -1.36
LINC01541-201ENST00000566582 LURAP1LQ8IV03 231 aa6.54□□□□□ -1.36
LINC01541-201ENST00000566582 Q8N8P6 123 aa6.54□□□□□ -1.36
LINC01541-201ENST00000566582 DYNLRB2Q8TF09 96 aa6.54□□□□□ -1.36
LINC01541-201ENST00000566582 MRAP2Q96G30 205 aa6.54□□□□□ -1.36
LINC01541-201ENST00000566582 AP1S3Q96PC3 154 aa6.54□□□□□ -1.36
LINC01541-201ENST00000566582 ST20Q9HBF5 79 aa6.54□□□□□ -1.36
LINC01541-201ENST00000566582 GOLT1BQ9Y3E0 138 aa6.54□□□□□ -1.36
LINC01541-201ENST00000566582 DUSP14O95147 198 aaKnown RBP6.54□□□□□ -1.36
LINC01541-201ENST00000566582 FCER1GP30273 86 aa6.54□□□□□ -1.36
LINC01541-201ENST00000566582 TSPOP30536 169 aa6.54□□□□□ -1.36
LINC01541-201ENST00000566582 CDKN1BP46527 198 aa6.54□□□□□ -1.36
LINC01541-201ENST00000566582 MRPL52Q86TS9 123 aaKnown RBP6.54□□□□□ -1.36
LINC01541-201ENST00000566582 OR9G4Q8NGQ1 327 aa6.54□□□□□ -1.36
LINC01541-201ENST00000566582 TMEM158Q8WZ71 300 aa6.54□□□□□ -1.36
LINC01541-201ENST00000566582 A0A1W2PRX2 142 aa6.53□□□□□ -1.36
LINC01541-201ENST00000566582 TCAPO15273 167 aa6.53□□□□□ -1.36
LINC01541-201ENST00000566582 ADAMTSL5Q6ZMM2 481 aa6.53□□□□□ -1.36
LINC01541-201ENST00000566582 LINC00469Q8N7U9 141 aa6.53□□□□□ -1.36
LINC01541-201ENST00000566582 NRACQ8N912 160 aa6.53□□□□□ -1.36
LINC01541-201ENST00000566582 DLX4Q92988 240 aaPredicted RBP6.53□□□□□ -1.36
LINC01541-201ENST00000566582 PRSS1P07477 247 aa6.52□□□□□ -1.36
LINC01541-201ENST00000566582 DEFB131AP59861 70 aa6.52□□□□□ -1.36
LINC01541-201ENST00000566582 LAGE3Q14657 143 aa6.52□□□□□ -1.36
LINC01541-201ENST00000566582 FOXI2Q6ZQN5 318 aa6.52□□□□□ -1.36
LINC01541-201ENST00000566582 ODF3Q96PU9 254 aa6.52□□□□□ -1.36
LINC01541-201ENST00000566582 HELZ2Q9BYK8 2649 aaKnown RBP6.52□□□□□ -1.36
LINC01541-201ENST00000566582 SCRT2Q9NQ03 307 aa6.52□□□□□ -1.36
LINC01541-201ENST00000566582 SORL1Q92673 2214 aa6.52□□□□□ -1.37
LINC01541-201ENST00000566582 LGALS9BQ3B8N2 356 aa6.52□□□□□ -1.37
LINC01541-201ENST00000566582 LGALS9CQ6DKI2 356 aa6.52□□□□□ -1.37
LINC01541-201ENST00000566582 SLC25A34Q6PIV7 304 aa6.52□□□□□ -1.37
LINC01541-201ENST00000566582 ESM1Q9NQ30 184 aa6.52□□□□□ -1.37
LINC01541-201ENST00000566582 KNCNA6PVL3 124 aa6.51□□□□□ -1.37
LINC01541-201ENST00000566582 CD5LO43866 347 aa6.51□□□□□ -1.37
LINC01541-201ENST00000566582 HTN1P15515 57 aa6.51□□□□□ -1.37
LINC01541-201ENST00000566582 NUTF2P61970 127 aaKnown RBP6.51□□□□□ -1.37
LINC01541-201ENST00000566582 TMEM61Q8N0U2 210 aa6.51□□□□□ -1.37
LINC01541-201ENST00000566582 KMT2BQ9UMN6 2715 aaPredicted RBP6.51□□□□□ -1.37
LINC01541-201ENST00000566582 AGRNO00468 2067 aa6.51□□□□□ -1.37
LINC01541-201ENST00000566582 IGLV2-18A0A075B6J9 118 aa6.51□□□□□ -1.37
LINC01541-201ENST00000566582 LINC01546A6NGU7 62 aa6.51□□□□□ -1.37
LINC01541-201ENST00000566582 F5H697 171 aa6.51□□□□□ -1.37
LINC01541-201ENST00000566582 NUDT3O95989 172 aa6.51□□□□□ -1.37
LINC01541-201ENST00000566582 HINT1P49773 126 aaPredicted RBP6.51□□□□□ -1.37
LINC01541-201ENST00000566582 TCTAP57738 103 aa6.51□□□□□ -1.37
LINC01541-201ENST00000566582 SUMO2P61956 95 aaKnown RBP6.51□□□□□ -1.37
LINC01541-201ENST00000566582 RPL39LQ96EH5 51 aaKnown RBP6.51□□□□□ -1.37
LINC01541-201ENST00000566582 FOXC2Q99958 501 aa6.51□□□□□ -1.37
LINC01541-201ENST00000566582 SMIM2Q9BVW6 85 aa6.51□□□□□ -1.37
LINC01541-201ENST00000566582 TP73-AS1Q9UF72 201 aa6.51□□□□□ -1.37
LINC01541-201ENST00000566582 IGHV1OR15-1A0A075B7D0 117 aa6.5□□□□□ -1.37
LINC01541-201ENST00000566582 A0A087WWL8 130 aa6.5□□□□□ -1.37
LINC01541-201ENST00000566582 FAM74A4Q5TZK3 123 aa6.5□□□□□ -1.37
LINC01541-201ENST00000566582 Q8N1Y9 231 aa6.5□□□□□ -1.37
LINC01541-201ENST00000566582 RASL10AQ92737 203 aa6.5□□□□□ -1.37
LINC01541-201ENST00000566582 JPT2Q9H910 190 aa6.5□□□□□ -1.37
LINC01541-201ENST00000566582 MRPS16Q9Y3D3 137 aaKnown RBP6.5□□□□□ -1.37
LINC01541-201ENST00000566582 ACANP16112 2415 aa6.5□□□□□ -1.37
LINC01541-201ENST00000566582 COL5A1-AS1Q5SY13 56 aa6.5□□□□□ -1.37
LINC01541-201ENST00000566582 SYT8Q8NBV8 401 aa6.5□□□□□ -1.37
LINC01541-201ENST00000566582 MDFICQ9P1T7 246 aa6.5□□□□□ -1.37
LINC01541-201ENST00000566582 ITPR2Q14571 2701 aa6.5□□□□□ -1.37
LINC01541-201ENST00000566582 PDZD2O15018 2839 aa6.49□□□□□ -1.37
LINC01541-201ENST00000566582 CBY3A6NI87 242 aa6.49□□□□□ -1.37
LINC01541-201ENST00000566582 ATP5LO75964 103 aa6.49□□□□□ -1.37
LINC01541-201ENST00000566582 PPP1R17O96001 155 aa6.49□□□□□ -1.37
LINC01541-201ENST00000566582 KRTAP1-1Q07627 177 aa6.49□□□□□ -1.37
LINC01541-201ENST00000566582 SCGB2A2Q13296 93 aa6.49□□□□□ -1.37
LINC01541-201ENST00000566582 ZNF124Q15973 351 aa6.49□□□□□ -1.37
LINC01541-201ENST00000566582 STPG4Q8N801 248 aa6.49□□□□□ -1.37
LINC01541-201ENST00000566582 C20orf78Q9BR46 151 aa6.49□□□□□ -1.37
LINC01541-201ENST00000566582 DKK2Q9UBU2 259 aa6.49□□□□□ -1.37
LINC01541-201ENST00000566582 IGHV3-16A0A0C4DH30 117 aa6.49□□□□□ -1.37
LINC01541-201ENST00000566582 CD28P10747 220 aa6.49□□□□□ -1.37
LINC01541-201ENST00000566582 CD300EQ496F6 205 aaPredicted RBP6.49□□□□□ -1.37
LINC01541-201ENST00000566582 ORMDL2Q53FV1 153 aa6.49□□□□□ -1.37
LINC01541-201ENST00000566582 DEFB125Q8N687 156 aa6.49□□□□□ -1.37
LINC01541-201ENST00000566582 MUC4Q99102 2169 aa6.49□□□□□ -1.37
LINC01541-201ENST00000566582 CCL24O00175 119 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms