RNA–Protein interactions for RNA: ENST00000566498.1

CCDC113-204, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-204ENST00000566498 SH2D1AO60880 128 aa13.29□□□□□ -0.28
CCDC113-204ENST00000566498 LTAP01374 205 aa13.29□□□□□ -0.28
CCDC113-204ENST00000566498 ZNF506Q5JVG8 444 aa13.29□□□□□ -0.28
CCDC113-204ENST00000566498 CFAP126Q5VTH2 177 aa13.29□□□□□ -0.28
CCDC113-204ENST00000566498 AKAP14Q86UN6 197 aa13.29□□□□□ -0.28
CCDC113-204ENST00000566498 TXNDC17Q9BRA2 123 aa13.29□□□□□ -0.28
CCDC113-204ENST00000566498 GNG13Q9P2W3 67 aa13.29□□□□□ -0.28
CCDC113-204ENST00000566498 BIRC6Q9NR09 4857 aa13.28□□□□□ -0.28
CCDC113-204ENST00000566498 SCO2A0A1W2PP80 73 aa13.28□□□□□ -0.28
CCDC113-204ENST00000566498 KRBOX1C9JBD0 128 aa13.28□□□□□ -0.28
CCDC113-204ENST00000566498 CIDEAO60543 219 aa13.28□□□□□ -0.28
CCDC113-204ENST00000566498 NXPH4O95158 308 aa13.28□□□□□ -0.28
CCDC113-204ENST00000566498 CCL20P78556 96 aa13.28□□□□□ -0.28
CCDC113-204ENST00000566498 COX8CQ7Z4L0 72 aa13.28□□□□□ -0.28
CCDC113-204ENST00000566498 NHLRC2Q8NBF2 726 aa13.28□□□□□ -0.28
CCDC113-204ENST00000566498 PTH2Q96A98 100 aa13.28□□□□□ -0.28
CCDC113-204ENST00000566498 A0A1B0GVY2 172 aa13.27□□□□□ -0.29
CCDC113-204ENST00000566498 GRIFINA4D1Z8 144 aa13.27□□□□□ -0.29
CCDC113-204ENST00000566498 GATA1P15976 413 aaPredicted RBP13.27□□□□□ -0.29
CCDC113-204ENST00000566498 ZNF674Q2M3X9 581 aa13.27□□□□□ -0.29
CCDC113-204ENST00000566498 SLC51BQ86UW2 128 aa13.27□□□□□ -0.29
CCDC113-204ENST00000566498 TMSB15BA0A087X1C1 80 aa13.26□□□□□ -0.29
CCDC113-204ENST00000566498 LOC100131303A0A0U1RQF7 123 aa13.26□□□□□ -0.29
CCDC113-204ENST00000566498 H3BVH4 76 aa13.26□□□□□ -0.29
CCDC113-204ENST00000566498 SULT1A2P50226 295 aa13.26□□□□□ -0.29
CCDC113-204ENST00000566498 BAGE2Q86Y30 109 aa13.26□□□□□ -0.29
CCDC113-204ENST00000566498 SLC25A29Q8N8R3 303 aa13.26□□□□□ -0.29
CCDC113-204ENST00000566498 PRADC1Q9BSG0 188 aa13.26□□□□□ -0.29
CCDC113-204ENST00000566498 MANBALQ9NQG1 85 aa13.26□□□□□ -0.29
CCDC113-204ENST00000566498 IL36BQ9NZH7 164 aa13.26□□□□□ -0.29
CCDC113-204ENST00000566498 TRAV1-1A0A0B4J248 108 aa13.25□□□□□ -0.29
CCDC113-204ENST00000566498 A0A1W2PPQ1 181 aa13.25□□□□□ -0.29
CCDC113-204ENST00000566498 ARMS2P0C7Q2 107 aa13.25□□□□□ -0.29
CCDC113-204ENST00000566498 A8MWV9 139 aa13.24□□□□□ -0.29
CCDC113-204ENST00000566498 TNP2Q05952 138 aa13.24□□□□□ -0.29
CCDC113-204ENST00000566498 SH2D6Q7Z4S9 175 aa13.24□□□□□ -0.29
CCDC113-204ENST00000566498 SYT8Q8NBV8 401 aa13.24□□□□□ -0.29
CCDC113-204ENST00000566498 KRTAP1-5Q9BYS1 174 aa13.24□□□□□ -0.29
CCDC113-204ENST00000566498 TRBV6-4A0A1B0GX49 114 aa13.23□□□□□ -0.29
CCDC113-204ENST00000566498 DMRTA1Q5VZB9 504 aa13.23□□□□□ -0.29
CCDC113-204ENST00000566498 PHLDA3Q9Y5J5 127 aa13.23□□□□□ -0.29
CCDC113-204ENST00000566498 TRAV9-2A0A087WT02 112 aa13.22□□□□□ -0.29
CCDC113-204ENST00000566498 MGST1P10620 155 aaKnown RBP13.22□□□□□ -0.29
CCDC113-204ENST00000566498 RHOHQ15669 191 aa13.22□□□□□ -0.29
CCDC113-204ENST00000566498 LINC01559Q495D7 138 aa13.22□□□□□ -0.29
CCDC113-204ENST00000566498 PIK3CD-AS1Q5SR53 167 aa13.22□□□□□ -0.29
CCDC113-204ENST00000566498 DNLZQ5SXM8 178 aa13.22□□□□□ -0.29
CCDC113-204ENST00000566498 DNAH17Q9UFH2 4485 aa13.21□□□□□ -0.29
CCDC113-204ENST00000566498 RPL35P42766 123 aaKnown RBP13.21□□□□□ -0.29
CCDC113-204ENST00000566498 PRR27Q6MZM9 219 aa13.21□□□□□ -0.29
CCDC113-204ENST00000566498 PARLQ9H300 379 aa13.21□□□□□ -0.29
CCDC113-204ENST00000566498 JPT2Q9H910 190 aa13.21□□□□□ -0.29
CCDC113-204ENST00000566498 FAT2Q9NYQ8 4349 aa13.2□□□□□ -0.3
CCDC113-204ENST00000566498 ZFP2Q6ZN57 461 aa13.2□□□□□ -0.3
CCDC113-204ENST00000566498 ZNF575Q86XF7 245 aa13.2□□□□□ -0.3
CCDC113-204ENST00000566498 C9orf62Q8N4C0 152 aa13.2□□□□□ -0.3
CCDC113-204ENST00000566498 MLST8Q9BVC4 326 aa13.2□□□□□ -0.3
CCDC113-204ENST00000566498 LY96Q9Y6Y9 160 aa13.2□□□□□ -0.3
CCDC113-204ENST00000566498 M0R381 172 aa13.19□□□□□ -0.3
CCDC113-204ENST00000566498 IFNA1P01562 189 aa13.19□□□□□ -0.3
CCDC113-204ENST00000566498 Q6ZSN1 163 aa13.19□□□□□ -0.3
CCDC113-204ENST00000566498 DERL1Q9BUN8 251 aa13.19□□□□□ -0.3
CCDC113-204ENST00000566498 SAMD10Q9BYL1 202 aa13.19□□□□□ -0.3
CCDC113-204ENST00000566498 BTF3P20290 206 aaKnown RBP13.18□□□□□ -0.3
CCDC113-204ENST00000566498 EVI2AP22794 236 aa13.18□□□□□ -0.3
CCDC113-204ENST00000566498 WFDC10BQ8IUB3 73 aa13.18□□□□□ -0.3
CCDC113-204ENST00000566498 LINC00315P59091 139 aa13.17□□□□□ -0.3
CCDC113-204ENST00000566498 RPL19P84098 196 aaKnown RBP13.17□□□□□ -0.3
CCDC113-204ENST00000566498 MEF2BQ02080 365 aaPredicted RBP13.17□□□□□ -0.3
CCDC113-204ENST00000566498 FAM74A4Q5TZK3 123 aa13.17□□□□□ -0.3
CCDC113-204ENST00000566498 ZFP82Q8N141 532 aa13.17□□□□□ -0.3
CCDC113-204ENST00000566498 C11orf52Q96A22 123 aa13.17□□□□□ -0.3
CCDC113-204ENST00000566498 SCRT2Q9NQ03 307 aa13.17□□□□□ -0.3
CCDC113-204ENST00000566498 HECTD4Q9Y4D8 3996 aa13.16□□□□□ -0.3
CCDC113-204ENST00000566498 PDE6DO43924 150 aa13.16□□□□□ -0.3
CCDC113-204ENST00000566498 ATP6V0E2Q8NHE4 81 aa13.16□□□□□ -0.3
CCDC113-204ENST00000566498 MED9Q9NWA0 146 aa13.16□□□□□ -0.3
CCDC113-204ENST00000566498 A0A087WWL8 130 aa13.15□□□□□ -0.3
CCDC113-204ENST00000566498 TRAV8-6A0A0B4J262 113 aa13.15□□□□□ -0.3
CCDC113-204ENST00000566498 RAB19A4D1S5 217 aa13.15□□□□□ -0.3
CCDC113-204ENST00000566498 GAGE12JA6NER3 117 aa13.15□□□□□ -0.3
CCDC113-204ENST00000566498 RHODO00212 210 aa13.15□□□□□ -0.3
CCDC113-204ENST00000566498 TIRAPP58753 221 aa13.15□□□□□ -0.3
CCDC113-204ENST00000566498 GAGE1Q13065 139 aa13.15□□□□□ -0.3
CCDC113-204ENST00000566498 GAGE4Q13068 117 aa13.15□□□□□ -0.3
CCDC113-204ENST00000566498 GAGE5Q13069 117 aa13.15□□□□□ -0.3
CCDC113-204ENST00000566498 GAGE13Q4V321 117 aa13.15□□□□□ -0.3
CCDC113-204ENST00000566498 CENPWQ5EE01 88 aa13.15□□□□□ -0.3
CCDC113-204ENST00000566498 OR10J3Q5JRS4 329 aa13.15□□□□□ -0.3
CCDC113-204ENST00000566498 DAZAP1Q96EP5 407 aaKnown RBP13.15□□□□□ -0.3
CCDC113-204ENST00000566498 SFRP2Q96HF1 295 aa13.15□□□□□ -0.3
CCDC113-204ENST00000566498 VAX2Q9UIW0 290 aa13.15□□□□□ -0.3
CCDC113-204ENST00000566498 TNFRSF18Q9Y5U5 241 aa13.15□□□□□ -0.3
CCDC113-204ENST00000566498 PKD1P98161 4303 aa13.15□□□□□ -0.31
CCDC113-204ENST00000566498 GNG4P50150 75 aa13.14□□□□□ -0.31
CCDC113-204ENST00000566498 SSTP61278 116 aa13.14□□□□□ -0.31
CCDC113-204ENST00000566498 UFSP1Q6NVU6 142 aa13.14□□□□□ -0.31
CCDC113-204ENST00000566498 ALKAL2Q6UX46 152 aa13.14□□□□□ -0.31
CCDC113-204ENST00000566498 C14orf178Q8N769 122 aaPredicted RBP13.14□□□□□ -0.31
CCDC113-204ENST00000566498 GTSF1LQ9H1H1 148 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms