RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 BCL7BQ9BQE9 202 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 C7orf50Q9BRJ6 194 aaKnown RBP0.69□□□□□ -2.3
SMG1-212ENST00000566328 TMEM208Q9BTX3 173 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 PDCD10Q9BUL8 212 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 MRPS26Q9BYN8 205 aaKnown RBP0.69□□□□□ -2.3
SMG1-212ENST00000566328 SRRQ9GZT4 340 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 MFFQ9GZY8 342 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 AGPAT4-IT1Q9H0P7 198 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 VCX3AQ9NNX9 186 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 NOP10Q9NPE3 64 aaKnown RBP0.69□□□□□ -2.3
SMG1-212ENST00000566328 BATF3Q9NR55 127 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 PSENENQ9NZ42 101 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 OR5AC2Q9NZP5 309 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 COMMD9Q9P000 198 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 CCDC59Q9P031 241 aaKnown RBP0.69□□□□□ -2.3
SMG1-212ENST00000566328 ZMAT5Q9UDW3 170 aaKnown RBP0.69□□□□□ -2.3
SMG1-212ENST00000566328 SHPKQ9UHJ6 478 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 SCP2D1Q9UJQ7 156 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 TBC1D24Q9ULP9 559 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 RABL2BQ9UNT1 228 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 C14orf166Q9Y224 244 aaKnown RBP0.69□□□□□ -2.3
SMG1-212ENST00000566328 RCL1Q9Y2P8 373 aaKnown RBP0.69□□□□□ -2.3
SMG1-212ENST00000566328 KCNIP3Q9Y2W7 256 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 LINC00588Q9Y4M8 146 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 KLF12Q9Y4X4 402 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 LSM5Q9Y4Y9 91 aaKnown RBP0.69□□□□□ -2.3
SMG1-212ENST00000566328 TIMM8BQ9Y5J9 83 aaPredicted RBP0.69□□□□□ -2.3
SMG1-212ENST00000566328 U3KQ87 197 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 TRAV30A0A087WSZ9 112 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 IGKV2-40A0A087WW87 121 aaPredicted RBP0.68□□□□□ -2.3
SMG1-212ENST00000566328 TRAV8-1A0A0A6YYK1 113 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 A0A1B0GV50 99 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 FAM240BA0A1B0GVZ2 78 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 C9JCJ5 164 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 INS-IGF2F8WCM5 200 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 K7EPK0 472 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 ZNF701M0R085 212 aaPredicted RBP0.68□□□□□ -2.3
SMG1-212ENST00000566328 GOSR2O14653 212 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 LECT2O14960 151 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 MRPS12O15235 138 aaKnown RBP0.68□□□□□ -2.3
SMG1-212ENST00000566328 CYB5BO43169 146 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 LYRM1O43325 122 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 GSTZ1O43708 216 aaPredicted RBP0.68□□□□□ -2.3
SMG1-212ENST00000566328 CREBL2O60519 120 aaPredicted RBP0.68□□□□□ -2.3
SMG1-212ENST00000566328 B3GALNT1O75752 331 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 SCGNO76038 276 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 NDUFB6O95139 128 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 IFNA21P01568 189 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 IGKV2D-40P01614 121 aaPredicted RBP0.68□□□□□ -2.3
SMG1-212ENST00000566328 HBE1P02100 147 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 TCRBP04435 133 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 SPART-AS1P0CW21 52 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 P0DMU3 169 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 FAM231AP0DMU4 169 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 FAM231CP0DMU5 169 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 SLC25A4P12235 298 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 IL7P13232 177 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 HLA-DRB4P13762 266 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 CXCL3P19876 107 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 FGF7P21781 194 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 S100GP29377 79 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 INPP1P49441 399 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 EIF2B2P49770 351 aaKnown RBP0.68□□□□□ -2.3
SMG1-212ENST00000566328 RAB5CP51148 216 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 ZNF80P51504 273 aaPredicted RBP0.68□□□□□ -2.3
SMG1-212ENST00000566328 AP2S1P53680 142 aaPredicted RBP0.68□□□□□ -2.3
SMG1-212ENST00000566328 H2BFSP57053 126 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 DEFA1P59665 94 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 S100A10P60903 97 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 DAD1P61803 113 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 SELENOTP62341 195 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 RAB11AP62491 216 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 GNG5P63218 68 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 AKR1C1Q04828 323 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 IL15RAQ13261 267 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 BTN1A1Q13410 526 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 CLINT1Q14677 625 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 ARL6IP1Q15041 203 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 MSMO1Q15800 293 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 PSG3Q16557 428 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 IAH1Q2TAA2 248 aaPredicted RBP0.68□□□□□ -2.3
SMG1-212ENST00000566328 TMEM128Q5BJH2 165 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 C1orf134Q5TEV5 83 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 C10orf113Q5VZT2 155 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 THOC7Q6I9Y2 204 aaKnown RBP0.68□□□□□ -2.3
SMG1-212ENST00000566328 EBLN2Q6P2I7 272 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 LYPD5Q6UWN5 251 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 TMEM14EPQ6UXP3 125 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 DPPA3Q6W0C5 159 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 FOXI2Q6ZQN5 318 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 CYP2G1PQ6ZSU1 146 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 SSX7Q7RTT5 188 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 TMEM144Q7Z5S9 345 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 SPATA12Q7Z6I5 190 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 C12orf45Q8N5I9 185 aaPredicted RBP0.68□□□□□ -2.3
SMG1-212ENST00000566328 C15orf56Q8N910 161 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 TMEM75Q8N9X5 138 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 ZNF738Q8NE65 137 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 OR8A1Q8NGG7 326 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 OR4D5Q8NGN0 318 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms