RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 NDPQ00604 133 aa2.3□□□□□ -2.04
CHD9-218ENST00000566029 SLC25A48Q6ZT89 311 aaKnown RBP2.3□□□□□ -2.04
CHD9-218ENST00000566029 C11orf53Q8IXP5 236 aa2.3□□□□□ -2.04
CHD9-218ENST00000566029 OR11H6Q8NGC7 330 aa2.3□□□□□ -2.04
CHD9-218ENST00000566029 TRAV4A0A0B4J268 109 aa2.3□□□□□ -2.04
CHD9-218ENST00000566029 IGKV3OR2-268A0A0C4DH90 116 aa2.3□□□□□ -2.04
CHD9-218ENST00000566029 APELAP0DMC3 54 aa2.3□□□□□ -2.04
CHD9-218ENST00000566029 DKK2Q9UBU2 259 aa2.3□□□□□ -2.04
CHD9-218ENST00000566029 KMT2BQ9UMN6 2715 aaPredicted RBP2.3□□□□□ -2.04
CHD9-218ENST00000566029 ANKHD1Q8IWZ3 2542 aaKnown RBP2.3□□□□□ -2.04
CHD9-218ENST00000566029 H3BUX3 64 aa2.3□□□□□ -2.04
CHD9-218ENST00000566029 PCNX1Q96RV3 2341 aa2.3□□□□□ -2.04
CHD9-218ENST00000566029 F8WEM9 126 aa2.3□□□□□ -2.04
CHD9-218ENST00000566029 M0R1B8 84 aa2.3□□□□□ -2.04
CHD9-218ENST00000566029 FUSP35637 526 aaKnown RBP eCLIP2.3□□□□□ -2.04
CHD9-218ENST00000566029 ZNF493Q6ZR52 646 aa2.3□□□□□ -2.04
CHD9-218ENST00000566029 ODF3Q96PU9 254 aa2.3□□□□□ -2.04
CHD9-218ENST00000566029 INS-IGF2F8WCM5 200 aa2.29□□□□□ -2.04
CHD9-218ENST00000566029 UBE2D3P61077 147 aa2.29□□□□□ -2.04
CHD9-218ENST00000566029 UBE2D2P62837 147 aa2.29□□□□□ -2.04
CHD9-218ENST00000566029 CCL19Q99731 98 aa2.29□□□□□ -2.04
CHD9-218ENST00000566029 PCNX3Q9H6A9 2034 aa2.29□□□□□ -2.04
CHD9-218ENST00000566029 PIEZO1Q92508 2521 aa2.29□□□□□ -2.04
CHD9-218ENST00000566029 C22orf34Q6ZV56 151 aa2.29□□□□□ -2.04
CHD9-218ENST00000566029 EML5Q05BV3 1969 aa2.29□□□□□ -2.04
CHD9-218ENST00000566029 IGHV3-13P01766 116 aa2.29□□□□□ -2.04
CHD9-218ENST00000566029 IGLC6P0CF74 106 aa2.29□□□□□ -2.04
CHD9-218ENST00000566029 COX6A1P12074 109 aa2.29□□□□□ -2.04
CHD9-218ENST00000566029 MRPL51Q4U2R6 128 aaKnown RBP2.29□□□□□ -2.04
CHD9-218ENST00000566029 C16orf47Q6ZP98 133 aaPredicted RBP2.29□□□□□ -2.04
CHD9-218ENST00000566029 ORMDL3Q8N138 153 aa2.29□□□□□ -2.04
CHD9-218ENST00000566029 EP300Q09472 2414 aaPredicted RBP2.29□□□□□ -2.04
CHD9-218ENST00000566029 IGHV3-9P01782 118 aa2.29□□□□□ -2.04
CHD9-218ENST00000566029 NTN5Q8WTR8 489 aaPredicted RBP2.29□□□□□ -2.04
CHD9-218ENST00000566029 ALPK2Q86TB3 2170 aa2.29□□□□□ -2.04
CHD9-218ENST00000566029 RNF223E7ERA6 249 aa2.29□□□□□ -2.04
CHD9-218ENST00000566029 NBR2O15453 112 aa2.29□□□□□ -2.04
CHD9-218ENST00000566029 IGHG2P01859 326 aa2.29□□□□□ -2.04
CHD9-218ENST00000566029 ADORA2A-AS1P86434 159 aa2.29□□□□□ -2.04
CHD9-218ENST00000566029 LPAL2Q16609 132 aa2.29□□□□□ -2.04
CHD9-218ENST00000566029 ZFP2Q6ZN57 461 aa2.29□□□□□ -2.04
CHD9-218ENST00000566029 B4DSR2 109 aa2.29□□□□□ -2.04
CHD9-218ENST00000566029 SH2D1AO60880 128 aa2.29□□□□□ -2.04
CHD9-218ENST00000566029 ZNF580Q9UK33 172 aa2.29□□□□□ -2.04
CHD9-218ENST00000566029 LRCOL1A6NCL2 159 aa2.29□□□□□ -2.04
CHD9-218ENST00000566029 C3orf22Q8N5N4 141 aa2.29□□□□□ -2.04
CHD9-218ENST00000566029 KLK5Q9Y337 293 aaPredicted RBP2.29□□□□□ -2.04
CHD9-218ENST00000566029 BEAN1Q3B7T3 259 aa2.29□□□□□ -2.04
CHD9-218ENST00000566029 SPRNQ5BIV9 151 aa2.29□□□□□ -2.04
CHD9-218ENST00000566029 TOMM6Q96B49 74 aa2.29□□□□□ -2.04
CHD9-218ENST00000566029 SIGLEC9Q9Y336 463 aa2.29□□□□□ -2.04
CHD9-218ENST00000566029 AVPP01185 164 aa2.29□□□□□ -2.04
CHD9-218ENST00000566029 IFI27P40305 119 aaPredicted RBP2.29□□□□□ -2.04
CHD9-218ENST00000566029 FOXG1P55316 489 aaPredicted RBP2.29□□□□□ -2.04
CHD9-218ENST00000566029 C4orf26Q17RF5 130 aa2.29□□□□□ -2.04
CHD9-218ENST00000566029 C15orf61A6NNL5 157 aa2.29□□□□□ -2.04
CHD9-218ENST00000566029 BAALC-AS2P0C853 105 aa2.29□□□□□ -2.04
CHD9-218ENST00000566029 CGB3P0DN86 165 aa2.29□□□□□ -2.04
CHD9-218ENST00000566029 CGB7P0DN87 165 aa2.29□□□□□ -2.04
CHD9-218ENST00000566029 VEGFBP49765 207 aa2.29□□□□□ -2.04
CHD9-218ENST00000566029 NRGNQ92686 78 aa2.29□□□□□ -2.04
CHD9-218ENST00000566029 TRGV9Q99603 122 aa2.29□□□□□ -2.04
CHD9-218ENST00000566029 C21orf62Q9NYP8 219 aa2.29□□□□□ -2.04
CHD9-218ENST00000566029 RNASE6Q93091 150 aaKnown RBP2.28□□□□□ -2.04
CHD9-218ENST00000566029 RBAKDNA6NC62 111 aa2.28□□□□□ -2.04
CHD9-218ENST00000566029 GATA4P43694 442 aa2.28□□□□□ -2.04
CHD9-218ENST00000566029 PRCDQ00LT1 54 aa2.28□□□□□ -2.04
CHD9-218ENST00000566029 IGLV3-12A0A075B6K2 115 aa2.28□□□□□ -2.04
CHD9-218ENST00000566029 TRBV10-3A0A0K0K1G6 114 aa2.28□□□□□ -2.04
CHD9-218ENST00000566029 Q6ZQT7 251 aa2.28□□□□□ -2.04
CHD9-218ENST00000566029 SRXN1Q9BYN0 137 aa2.28□□□□□ -2.04
CHD9-218ENST00000566029 IGKV3-7A0A075B6H7 116 aa2.28□□□□□ -2.04
CHD9-218ENST00000566029 A0A1W2PR77 199 aa2.28□□□□□ -2.04
CHD9-218ENST00000566029 C1orf229Q6ZS94 237 aaPredicted RBP2.28□□□□□ -2.04
CHD9-218ENST00000566029 C9orf139Q6ZV77 190 aa2.28□□□□□ -2.04
CHD9-218ENST00000566029 SCXQ7RTU7 201 aa2.28□□□□□ -2.04
CHD9-218ENST00000566029 RNF7Q9UBF6 113 aa2.28□□□□□ -2.04
CHD9-218ENST00000566029 WNK2Q9Y3S1 2297 aa2.28□□□□□ -2.04
CHD9-218ENST00000566029 H3BT86 120 aa2.28□□□□□ -2.04
CHD9-218ENST00000566029 EBI3Q14213 229 aa2.28□□□□□ -2.04
CHD9-218ENST00000566029 IGKV1OR2-108A0A075B7D4 117 aa2.28□□□□□ -2.04
CHD9-218ENST00000566029 PRR4Q16378 134 aa2.28□□□□□ -2.04
CHD9-218ENST00000566029 ARMS2P0C7Q2 107 aa2.28□□□□□ -2.04
CHD9-218ENST00000566029 LYNX1P0DP58 116 aa2.28□□□□□ -2.04
CHD9-218ENST00000566029 UBE2E1P51965 193 aa2.28□□□□□ -2.04
CHD9-218ENST00000566029 IGKV1D-37A0A075B6S9 117 aa2.28□□□□□ -2.04
CHD9-218ENST00000566029 LGALS9O00182 355 aa2.28□□□□□ -2.04
CHD9-218ENST00000566029 IGLV2-11P01706 119 aa2.28□□□□□ -2.04
CHD9-218ENST00000566029 FAM104BQ5XKR9 115 aa2.28□□□□□ -2.04
CHD9-218ENST00000566029 CNEP1R1Q8N9A8 125 aa2.28□□□□□ -2.04
CHD9-218ENST00000566029 HHLA3Q9XRX5 114 aa2.28□□□□□ -2.04
CHD9-218ENST00000566029 PSPNO60542 156 aa2.28□□□□□ -2.04
CHD9-218ENST00000566029 ZNF71Q9NQZ8 489 aaPredicted RBP2.28□□□□□ -2.04
CHD9-218ENST00000566029 TRBV7-6A0A0J9YX20 115 aa2.28□□□□□ -2.05
CHD9-218ENST00000566029 CRYGDP07320 174 aa2.28□□□□□ -2.05
CHD9-218ENST00000566029 TFF2Q03403 129 aa2.28□□□□□ -2.05
CHD9-218ENST00000566029 CHCHD2Q9Y6H1 151 aaPredicted RBP2.28□□□□□ -2.05
CHD9-218ENST00000566029 DSCAMO60469 2012 aa2.28□□□□□ -2.05
CHD9-218ENST00000566029 MYMXA0A1B0GTQ4 84 aa2.28□□□□□ -2.05
CHD9-218ENST00000566029 ZNF503-AS2A6NEH8 195 aa2.28□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms