RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 PKIGQ9Y2B9 76 aa10.63□□□□□ -0.71
CX3CL1-204ENST00000565912 RBAKDNA6NC62 111 aa10.63□□□□□ -0.71
CX3CL1-204ENST00000565912 KIAA1671Q9BY89 1806 aa10.63□□□□□ -0.71
CX3CL1-204ENST00000565912 K7EQD1 137 aa10.63□□□□□ -0.71
CX3CL1-204ENST00000565912 SPRNQ5BIV9 151 aa10.63□□□□□ -0.71
CX3CL1-204ENST00000565912 HERV-K104P63124 156 aa10.63□□□□□ -0.71
CX3CL1-204ENST00000565912 C8orf31Q8N9H6 132 aa10.63□□□□□ -0.71
CX3CL1-204ENST00000565912 F8W735 103 aaPredicted RBP10.62□□□□□ -0.71
CX3CL1-204ENST00000565912 FUSP35637 526 aaKnown RBP eCLIP10.62□□□□□ -0.71
CX3CL1-204ENST00000565912 MAJINQ3KP22 176 aa10.62□□□□□ -0.71
CX3CL1-204ENST00000565912 RPL39LQ96EH5 51 aaKnown RBP10.62□□□□□ -0.71
CX3CL1-204ENST00000565912 SLX1AQ9BQ83 275 aa10.62□□□□□ -0.71
CX3CL1-204ENST00000565912 NOTCH4Q99466 2003 aa10.62□□□□□ -0.71
CX3CL1-204ENST00000565912 CACNA1HO95180 2353 aa10.62□□□□□ -0.71
CX3CL1-204ENST00000565912 WIPF2Q8TF74 440 aaPredicted RBP10.62□□□□□ -0.71
CX3CL1-204ENST00000565912 ZNF407Q9C0G0 2248 aa10.62□□□□□ -0.71
CX3CL1-204ENST00000565912 COX7A2LO14548 114 aa10.62□□□□□ -0.71
CX3CL1-204ENST00000565912 RBM3P98179 157 aaKnown RBP10.62□□□□□ -0.71
CX3CL1-204ENST00000565912 HIST2H2BCQ6DN03 193 aa10.62□□□□□ -0.71
CX3CL1-204ENST00000565912 LENEPQ9Y5L5 61 aa10.62□□□□□ -0.71
CX3CL1-204ENST00000565912 NRGNQ92686 78 aa10.61□□□□□ -0.71
CX3CL1-204ENST00000565912 IGHV7-81A0A0B4J1V7 117 aa10.61□□□□□ -0.71
CX3CL1-204ENST00000565912 WT1P19544 449 aaPredicted RBP10.61□□□□□ -0.71
CX3CL1-204ENST00000565912 C11orf53Q8IXP5 236 aa10.61□□□□□ -0.71
CX3CL1-204ENST00000565912 PLXNA2O75051 1894 aa10.61□□□□□ -0.71
CX3CL1-204ENST00000565912 C5orf47Q569G3 176 aa10.6□□□□□ -0.71
CX3CL1-204ENST00000565912 ZNF747Q9BV97 191 aa10.6□□□□□ -0.71
CX3CL1-204ENST00000565912 SPANXDQ9BXN6 97 aa10.6□□□□□ -0.71
CX3CL1-204ENST00000565912 SIVA1O15304 175 aa10.6□□□□□ -0.71
CX3CL1-204ENST00000565912 CHKB-CPT1BH3BT56 60 aa10.6□□□□□ -0.71
CX3CL1-204ENST00000565912 COX7B2Q8TF08 81 aa10.6□□□□□ -0.71
CX3CL1-204ENST00000565912 PRB2P02812 416 aaPredicted RBP10.59□□□□□ -0.71
CX3CL1-204ENST00000565912 NPSP0C0P6 89 aa10.59□□□□□ -0.71
CX3CL1-204ENST00000565912 GAGE12HA6NDE8 117 aa10.59□□□□□ -0.71
CX3CL1-204ENST00000565912 K7EMI3 77 aa10.59□□□□□ -0.71
CX3CL1-204ENST00000565912 PCP2Q8IVA1 136 aa10.59□□□□□ -0.71
CX3CL1-204ENST00000565912 NPBQ8NG41 125 aa10.59□□□□□ -0.71
CX3CL1-204ENST00000565912 RITA1Q96K30 269 aa10.59□□□□□ -0.71
CX3CL1-204ENST00000565912 DOCK11Q5JSL3 2073 aa10.59□□□□□ -0.71
CX3CL1-204ENST00000565912 ZFP2Q6ZN57 461 aa10.58□□□□□ -0.72
CX3CL1-204ENST00000565912 SND1-IT1Q9HBX3 110 aa10.58□□□□□ -0.72
CX3CL1-204ENST00000565912 IGHV4OR15-8A0A075B7B6 117 aa10.58□□□□□ -0.72
CX3CL1-204ENST00000565912 A0A087WW49 117 aa10.58□□□□□ -0.72
CX3CL1-204ENST00000565912 UBE2AP49459 152 aa10.58□□□□□ -0.72
CX3CL1-204ENST00000565912 CREBBPQ92793 2442 aa10.58□□□□□ -0.72
CX3CL1-204ENST00000565912 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.58□□□□□ -0.72
CX3CL1-204ENST00000565912 SH2D6Q7Z4S9 175 aa10.58□□□□□ -0.72
CX3CL1-204ENST00000565912 RNF152Q8N8N0 203 aa10.58□□□□□ -0.72
CX3CL1-204ENST00000565912 MRPL36Q9P0J6 103 aaKnown RBP10.58□□□□□ -0.72
CX3CL1-204ENST00000565912 KLF2Q9Y5W3 355 aaPredicted RBP10.58□□□□□ -0.72
CX3CL1-204ENST00000565912 DEFB4AO15263 64 aa10.58□□□□□ -0.72
CX3CL1-204ENST00000565912 NDUFB1O75438 58 aa10.58□□□□□ -0.72
CX3CL1-204ENST00000565912 IGLV3-1P01715 115 aa10.58□□□□□ -0.72
CX3CL1-204ENST00000565912 DAZ2Q13117 558 aaKnown RBP10.58□□□□□ -0.72
CX3CL1-204ENST00000565912 DAZ4Q86SG3 579 aaKnown RBP10.58□□□□□ -0.72
CX3CL1-204ENST00000565912 DAZ3Q9NR90 486 aaKnown RBP10.58□□□□□ -0.72
CX3CL1-204ENST00000565912 A0A0J9YXV3 536 aa10.57□□□□□ -0.72
CX3CL1-204ENST00000565912 HELZP42694 1942 aaKnown RBP10.57□□□□□ -0.72
CX3CL1-204ENST00000565912 I3L2K1 104 aa10.57□□□□□ -0.72
CX3CL1-204ENST00000565912 PRSS47A8MTI9 375 aa10.56□□□□□ -0.72
CX3CL1-204ENST00000565912 TMEM258P61165 79 aa10.56□□□□□ -0.72
CX3CL1-204ENST00000565912 NUP210Q8TEM1 1887 aaPredicted RBP10.56□□□□□ -0.72
CX3CL1-204ENST00000565912 K7EIM0 57 aa10.56□□□□□ -0.72
CX3CL1-204ENST00000565912 CCL25O15444 150 aa10.56□□□□□ -0.72
CX3CL1-204ENST00000565912 CITED1Q99966 193 aa10.56□□□□□ -0.72
CX3CL1-204ENST00000565912 MSRB1Q9NZV6 116 aa10.56□□□□□ -0.72
CX3CL1-204ENST00000565912 NCR3O14931 201 aa10.56□□□□□ -0.72
CX3CL1-204ENST00000565912 CTSGP08311 255 aa10.56□□□□□ -0.72
CX3CL1-204ENST00000565912 C10orf105Q8TEF2 133 aa10.56□□□□□ -0.72
CX3CL1-204ENST00000565912 IGLV11-55A0A075B6I3 123 aa10.55□□□□□ -0.72
CX3CL1-204ENST00000565912 HHLA3Q9XRX5 114 aa10.55□□□□□ -0.72
CX3CL1-204ENST00000565912 DEFB135Q30KP9 77 aa10.55□□□□□ -0.72
CX3CL1-204ENST00000565912 C4orf48Q5BLP8 95 aa10.55□□□□□ -0.72
CX3CL1-204ENST00000565912 C16orf54Q6UWD8 224 aa10.55□□□□□ -0.72
CX3CL1-204ENST00000565912 IGHG2P01859 326 aa10.55□□□□□ -0.72
CX3CL1-204ENST00000565912 OPRPNQ99935 248 aaPredicted RBP10.55□□□□□ -0.72
CX3CL1-204ENST00000565912 IGLL5B9A064 214 aa10.55□□□□□ -0.72
CX3CL1-204ENST00000565912 MUSTN1Q8IVN3 82 aa10.55□□□□□ -0.72
CX3CL1-204ENST00000565912 VSIG2Q96IQ7 327 aa10.54□□□□□ -0.72
CX3CL1-204ENST00000565912 C9orf47Q6ZRZ4 202 aa10.54□□□□□ -0.72
CX3CL1-204ENST00000565912 NDUFA1O15239 70 aa10.54□□□□□ -0.72
CX3CL1-204ENST00000565912 C10orf91Q5T1B1 145 aa10.54□□□□□ -0.72
CX3CL1-204ENST00000565912 Q8N1Y9 231 aa10.54□□□□□ -0.72
CX3CL1-204ENST00000565912 C2orf70A6NJV1 201 aa10.53□□□□□ -0.72
CX3CL1-204ENST00000565912 C5orf56Q8N8D9 126 aa10.53□□□□□ -0.72
CX3CL1-204ENST00000565912 DAND5Q8N907 189 aa10.53□□□□□ -0.72
CX3CL1-204ENST00000565912 FANCD2OSQ96PS1 177 aa10.53□□□□□ -0.72
CX3CL1-204ENST00000565912 H0YGX0 51 aa10.53□□□□□ -0.72
CX3CL1-204ENST00000565912 IGKV1-17P01599 117 aa10.53□□□□□ -0.72
CX3CL1-204ENST00000565912 Q8N9W7 124 aa10.53□□□□□ -0.72
CX3CL1-204ENST00000565912 WFDC9Q8NEX5 89 aa10.53□□□□□ -0.72
CX3CL1-204ENST00000565912 NREPQ16612 68 aa10.52□□□□□ -0.72
CX3CL1-204ENST00000565912 SEM1Q6ZVN7 128 aa10.52□□□□□ -0.72
CX3CL1-204ENST00000565912 ADORA2A-AS1P86434 159 aa10.52□□□□□ -0.73
CX3CL1-204ENST00000565912 FGF23Q9GZV9 251 aaPredicted RBP10.52□□□□□ -0.73
CX3CL1-204ENST00000565912 TM2D2Q9BX73 214 aa10.52□□□□□ -0.73
CX3CL1-204ENST00000565912 RPL39P62891 51 aaKnown RBP10.51□□□□□ -0.73
CX3CL1-204ENST00000565912 KLK5Q9Y337 293 aaPredicted RBP10.51□□□□□ -0.73
CX3CL1-204ENST00000565912 PRAC2D3DTV9 90 aa10.51□□□□□ -0.73
CX3CL1-204ENST00000565912 TRBV7-3A0A075B6L6 115 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms