RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 SNHG12Q9BXW3 62 aa5.47□□□□□ -1.53
HERPUD1-209ENST00000564678 SIGLEC8Q9NYZ4 499 aa5.47□□□□□ -1.53
HERPUD1-209ENST00000564678 C11orf21Q9P2W6 132 aa5.47□□□□□ -1.53
HERPUD1-209ENST00000564678 ZNF462Q96JM2 2506 aa5.46□□□□□ -1.53
HERPUD1-209ENST00000564678 LINC01546A6NGU7 62 aa5.46□□□□□ -1.53
HERPUD1-209ENST00000564678 OR4C46A6NHA9 309 aa5.46□□□□□ -1.53
HERPUD1-209ENST00000564678 LGALS9O00182 355 aa5.46□□□□□ -1.53
HERPUD1-209ENST00000564678 RS1O15537 224 aa5.46□□□□□ -1.53
HERPUD1-209ENST00000564678 MED14OSP0DP75 135 aa5.46□□□□□ -1.53
HERPUD1-209ENST00000564678 LCNL1Q6ZST4 164 aa5.46□□□□□ -1.53
HERPUD1-209ENST00000564678 DEFB125Q8N687 156 aa5.46□□□□□ -1.53
HERPUD1-209ENST00000564678 ZFAND2AQ8N6M9 145 aa5.46□□□□□ -1.53
HERPUD1-209ENST00000564678 UBE2E2Q96LR5 201 aa5.46□□□□□ -1.53
HERPUD1-209ENST00000564678 MCRIP2Q9BUT9 160 aaKnown RBP5.46□□□□□ -1.53
HERPUD1-209ENST00000564678 ZNF747Q9BV97 191 aa5.46□□□□□ -1.53
HERPUD1-209ENST00000564678 CR1P17927 2039 aa5.46□□□□□ -1.54
HERPUD1-209ENST00000564678 ANKRD17O75179 2603 aaKnown RBP5.46□□□□□ -1.54
HERPUD1-209ENST00000564678 KRTAP10-9P60411 292 aa5.46□□□□□ -1.54
HERPUD1-209ENST00000564678 GAGE2BQ13066 116 aa5.46□□□□□ -1.54
HERPUD1-209ENST00000564678 GAGE2EQ4V326 116 aa5.46□□□□□ -1.54
HERPUD1-209ENST00000564678 GAGE2AQ6NT46 116 aa5.46□□□□□ -1.54
HERPUD1-209ENST00000564678 MAPK1IP1LQ8NDC0 245 aa5.46□□□□□ -1.54
HERPUD1-209ENST00000564678 MAP1LC3AQ9H492 121 aa5.46□□□□□ -1.54
HERPUD1-209ENST00000564678 ST20Q9HBF5 79 aa5.46□□□□□ -1.54
HERPUD1-209ENST00000564678 NXT2Q9NPJ8 142 aaKnown RBP5.46□□□□□ -1.54
HERPUD1-209ENST00000564678 MSRB1Q9NZV6 116 aa5.46□□□□□ -1.54
HERPUD1-209ENST00000564678 GAGE2DQ9UEU5 116 aa5.46□□□□□ -1.54
HERPUD1-209ENST00000564678 CELSR1Q9NYQ6 3014 aa5.46□□□□□ -1.54
HERPUD1-209ENST00000564678 MUC21A0A0G2JKD1 596 aa5.45□□□□□ -1.54
HERPUD1-209ENST00000564678 MUC21A0A140T8X8 626 aa5.45□□□□□ -1.54
HERPUD1-209ENST00000564678 NPYP01303 97 aa5.45□□□□□ -1.54
HERPUD1-209ENST00000564678 LGALS1P09382 135 aaKnown RBP5.45□□□□□ -1.54
HERPUD1-209ENST00000564678 MUC21Q5SSG8 566 aa5.45□□□□□ -1.54
HERPUD1-209ENST00000564678 LINC01545Q5VT33 79 aa5.45□□□□□ -1.54
HERPUD1-209ENST00000564678 LINC00173Q6ZV60 143 aa5.45□□□□□ -1.54
HERPUD1-209ENST00000564678 Q8N2B8 174 aa5.45□□□□□ -1.54
HERPUD1-209ENST00000564678 DCANP1Q8TF63 244 aa5.45□□□□□ -1.54
HERPUD1-209ENST00000564678 MS4A6AQ9H2W1 248 aa5.45□□□□□ -1.54
HERPUD1-209ENST00000564678 ZNF702PQ9H963 129 aa5.45□□□□□ -1.54
HERPUD1-209ENST00000564678 CSMD2Q7Z408 3487 aa5.45□□□□□ -1.54
HERPUD1-209ENST00000564678 UTP20O75691 2785 aaKnown RBP5.45□□□□□ -1.54
HERPUD1-209ENST00000564678 A0A096LNJ9 63 aa5.45□□□□□ -1.54
HERPUD1-209ENST00000564678 LOC389332A0A1B0GUA5 103 aa5.45□□□□□ -1.54
HERPUD1-209ENST00000564678 RHODO00212 210 aa5.45□□□□□ -1.54
HERPUD1-209ENST00000564678 HBDP02042 147 aa5.45□□□□□ -1.54
HERPUD1-209ENST00000564678 IGLL1P15814 213 aa5.45□□□□□ -1.54
HERPUD1-209ENST00000564678 BEAN1Q3B7T3 259 aa5.45□□□□□ -1.54
HERPUD1-209ENST00000564678 PAPPA-AS1Q5QFB9 102 aa5.45□□□□□ -1.54
HERPUD1-209ENST00000564678 SPANXN1Q5VSR9 72 aa5.45□□□□□ -1.54
HERPUD1-209ENST00000564678 Q96MF0 132 aa5.45□□□□□ -1.54
HERPUD1-209ENST00000564678 ODF3Q96PU9 254 aa5.45□□□□□ -1.54
HERPUD1-209ENST00000564678 MRPS16Q9Y3D3 137 aaKnown RBP5.45□□□□□ -1.54
HERPUD1-209ENST00000564678 USP9YO00507 2555 aaPredicted RBP5.45□□□□□ -1.54
HERPUD1-209ENST00000564678 CRYBG3Q68DQ2 2970 aa5.44□□□□□ -1.54
HERPUD1-209ENST00000564678 NBPF19A0A087WUL8 3843 aa5.44□□□□□ -1.54
HERPUD1-209ENST00000564678 UBR5O95071 2799 aaPredicted RBP5.44□□□□□ -1.54
HERPUD1-209ENST00000564678 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.44□□□□□ -1.54
HERPUD1-209ENST00000564678 NUTF2P61970 127 aaKnown RBP5.44□□□□□ -1.54
HERPUD1-209ENST00000564678 PRR9Q5T870 116 aa5.44□□□□□ -1.54
HERPUD1-209ENST00000564678 ATOH7Q8N100 152 aa5.44□□□□□ -1.54
HERPUD1-209ENST00000564678 TMEM86BQ8N661 226 aa5.44□□□□□ -1.54
HERPUD1-209ENST00000564678 A0A1B0GV90 55 aa5.43□□□□□ -1.54
HERPUD1-209ENST00000564678 KLLNB2CW77 178 aa5.43□□□□□ -1.54
HERPUD1-209ENST00000564678 EVI2AP22794 236 aa5.43□□□□□ -1.54
HERPUD1-209ENST00000564678 S100A4P26447 101 aaKnown RBP5.43□□□□□ -1.54
HERPUD1-209ENST00000564678 ASIPP42127 132 aa5.43□□□□□ -1.54
HERPUD1-209ENST00000564678 HNRNPA3P51991 378 aaKnown RBP5.43□□□□□ -1.54
HERPUD1-209ENST00000564678 SNRPD3P62318 126 aaKnown RBP5.43□□□□□ -1.54
HERPUD1-209ENST00000564678 LGALS9BQ3B8N2 356 aa5.43□□□□□ -1.54
HERPUD1-209ENST00000564678 LGALS9CQ6DKI2 356 aa5.43□□□□□ -1.54
HERPUD1-209ENST00000564678 Q6ZN92 141 aa5.43□□□□□ -1.54
HERPUD1-209ENST00000564678 MRAP2Q96G30 205 aa5.43□□□□□ -1.54
HERPUD1-209ENST00000564678 SCRT2Q9NQ03 307 aa5.43□□□□□ -1.54
HERPUD1-209ENST00000564678 CELSR2Q9HCU4 2923 aa5.43□□□□□ -1.54
HERPUD1-209ENST00000564678 C9orf118A6NHY6 69 aa5.43□□□□□ -1.54
HERPUD1-209ENST00000564678 SMKR1H3BMG3 65 aa5.43□□□□□ -1.54
HERPUD1-209ENST00000564678 FCER1GP30273 86 aa5.43□□□□□ -1.54
HERPUD1-209ENST00000564678 TSPOP30536 169 aa5.43□□□□□ -1.54
HERPUD1-209ENST00000564678 PSMG4Q5JS54 123 aa5.43□□□□□ -1.54
HERPUD1-209ENST00000564678 C10orf99Q6UWK7 81 aa5.43□□□□□ -1.54
HERPUD1-209ENST00000564678 Q8N8P6 123 aa5.43□□□□□ -1.54
HERPUD1-209ENST00000564678 OR4C5Q8NGB2 326 aa5.43□□□□□ -1.54
HERPUD1-209ENST00000564678 OR2K2Q8NGT1 345 aa5.43□□□□□ -1.54
HERPUD1-209ENST00000564678 PTPN13Q12923 2485 aa5.42□□□□□ -1.54
HERPUD1-209ENST00000564678 LRRK2Q5S007 2527 aa5.42□□□□□ -1.54
HERPUD1-209ENST00000564678 IGKV3-7A0A075B6H7 116 aa5.42□□□□□ -1.54
HERPUD1-209ENST00000564678 KRTAP4-8A0A0G2JLE6 195 aa5.42□□□□□ -1.54
HERPUD1-209ENST00000564678 H3BVH4 76 aa5.42□□□□□ -1.54
HERPUD1-209ENST00000564678 K7EQG2 157 aa5.42□□□□□ -1.54
HERPUD1-209ENST00000564678 NCR2O95944 276 aa5.42□□□□□ -1.54
HERPUD1-209ENST00000564678 RNASE4P34096 147 aaKnown RBP5.42□□□□□ -1.54
HERPUD1-209ENST00000564678 Q75L30 129 aa5.42□□□□□ -1.54
HERPUD1-209ENST00000564678 IFI27L1Q96BM0 104 aa5.42□□□□□ -1.54
HERPUD1-209ENST00000564678 PHLDA3Q9Y5J5 127 aa5.42□□□□□ -1.54
HERPUD1-209ENST00000564678 FBN2P35556 2912 aa5.42□□□□□ -1.54
HERPUD1-209ENST00000564678 IGLV2-18A0A075B6J9 118 aa5.42□□□□□ -1.54
HERPUD1-209ENST00000564678 F6UB75 175 aa5.42□□□□□ -1.54
HERPUD1-209ENST00000564678 K7EMI3 77 aa5.42□□□□□ -1.54
HERPUD1-209ENST00000564678 PPP1R17O96001 155 aa5.42□□□□□ -1.54
HERPUD1-209ENST00000564678 LEPP41159 167 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms