RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 TTC28Q96AY4 2481 aa5.78□□□□□ -1.48
ATXN3-249ENST00000564606 PLEKHB2Q96CS7 222 aa5.78□□□□□ -1.48
ATXN3-249ENST00000564606 SPANXB1Q9NS25 103 aaPredicted RBP5.78□□□□□ -1.48
ATXN3-249ENST00000564606 C11orf21Q9P2W6 132 aa5.78□□□□□ -1.48
ATXN3-249ENST00000564606 WDFY3Q8IZQ1 3526 aa5.78□□□□□ -1.48
ATXN3-249ENST00000564606 IGHV3-49A0A0A0MS15 119 aa5.77□□□□□ -1.49
ATXN3-249ENST00000564606 TRBV27A0A0K0K1C4 114 aa5.77□□□□□ -1.49
ATXN3-249ENST00000564606 PRSS29PA6NIE9 313 aa5.77□□□□□ -1.49
ATXN3-249ENST00000564606 CD7P09564 240 aa5.77□□□□□ -1.49
ATXN3-249ENST00000564606 FXYD2P54710 66 aa5.77□□□□□ -1.49
ATXN3-249ENST00000564606 NSUN5P1Q3KNT7 163 aa5.77□□□□□ -1.49
ATXN3-249ENST00000564606 LINC01356Q8N9X3 169 aa5.77□□□□□ -1.49
ATXN3-249ENST00000564606 BAALCQ8WXS3 180 aa5.77□□□□□ -1.49
ATXN3-249ENST00000564606 EDA2RQ9HAV5 297 aa5.77□□□□□ -1.49
ATXN3-249ENST00000564606 MRPL16Q9NX20 251 aaKnown RBP5.77□□□□□ -1.49
ATXN3-249ENST00000564606 PEMTQ9UBM1 199 aa5.77□□□□□ -1.49
ATXN3-249ENST00000564606 VPS13AQ96RL7 3174 aa5.77□□□□□ -1.49
ATXN3-249ENST00000564606 ZNF292O60281 2723 aa5.76□□□□□ -1.49
ATXN3-249ENST00000564606 TPRP12270 2363 aaKnown RBP5.76□□□□□ -1.49
ATXN3-249ENST00000564606 IGHV1OR15-1A0A075B7D0 117 aa5.76□□□□□ -1.49
ATXN3-249ENST00000564606 TMEM238C9JI98 176 aa5.76□□□□□ -1.49
ATXN3-249ENST00000564606 RHODO00212 210 aa5.76□□□□□ -1.49
ATXN3-249ENST00000564606 GATA1P15976 413 aaPredicted RBP5.76□□□□□ -1.49
ATXN3-249ENST00000564606 POLR2KP53803 58 aaKnown RBP5.76□□□□□ -1.49
ATXN3-249ENST00000564606 CMC4P56277 68 aaPredicted RBP5.76□□□□□ -1.49
ATXN3-249ENST00000564606 ZFP2Q6ZN57 461 aa5.76□□□□□ -1.49
ATXN3-249ENST00000564606 ZNF575Q86XF7 245 aa5.76□□□□□ -1.49
ATXN3-249ENST00000564606 PTH2Q96A98 100 aa5.76□□□□□ -1.49
ATXN3-249ENST00000564606 SIGMAR1Q99720 223 aa5.76□□□□□ -1.49
ATXN3-249ENST00000564606 PRADC1Q9BSG0 188 aa5.76□□□□□ -1.49
ATXN3-249ENST00000564606 SPEGQ15772 3267 aa5.75□□□□□ -1.49
ATXN3-249ENST00000564606 TRBV7-3A0A075B6L6 115 aa5.75□□□□□ -1.49
ATXN3-249ENST00000564606 IGKV2D-26A0A0A0MRZ7 120 aa5.75□□□□□ -1.49
ATXN3-249ENST00000564606 TRAV26-2A0A0B4J265 109 aa5.75□□□□□ -1.49
ATXN3-249ENST00000564606 SDHAF1A6NFY7 115 aa5.75□□□□□ -1.49
ATXN3-249ENST00000564606 A8MWV9 139 aa5.75□□□□□ -1.49
ATXN3-249ENST00000564606 TMEM262E9PQX1 116 aa5.75□□□□□ -1.49
ATXN3-249ENST00000564606 I3L3M4 83 aa5.75□□□□□ -1.49
ATXN3-249ENST00000564606 LEPROTO15243 131 aa5.75□□□□□ -1.49
ATXN3-249ENST00000564606 LGALS1P09382 135 aaKnown RBP5.75□□□□□ -1.49
ATXN3-249ENST00000564606 RNASE3P12724 160 aaKnown RBP5.75□□□□□ -1.49
ATXN3-249ENST00000564606 CDSNQ15517 529 aa5.75□□□□□ -1.49
ATXN3-249ENST00000564606 ZNF56Q15929 161 aa5.75□□□□□ -1.49
ATXN3-249ENST00000564606 LY6EQ16553 131 aa5.75□□□□□ -1.49
ATXN3-249ENST00000564606 CD300EQ496F6 205 aaPredicted RBP5.75□□□□□ -1.49
ATXN3-249ENST00000564606 UNQ9165/PRO28630Q6UXU0 137 aa5.75□□□□□ -1.49
ATXN3-249ENST00000564606 LCNL1Q6ZST4 164 aa5.75□□□□□ -1.49
ATXN3-249ENST00000564606 Q71RC1 249 aaPredicted RBP5.75□□□□□ -1.49
ATXN3-249ENST00000564606 C20orf173Q96LM9 149 aa5.75□□□□□ -1.49
ATXN3-249ENST00000564606 MDFICQ9P1T7 246 aa5.75□□□□□ -1.49
ATXN3-249ENST00000564606 TP53TG1Q9Y2A0 90 aa5.75□□□□□ -1.49
ATXN3-249ENST00000564606 ANKRD11Q6UB99 2663 aaPredicted RBP5.75□□□□□ -1.49
ATXN3-249ENST00000564606 APC2O95996 2303 aa5.75□□□□□ -1.49
ATXN3-249ENST00000564606 RIF1Q5UIP0 2472 aaKnown RBP5.74□□□□□ -1.49
ATXN3-249ENST00000564606 FREM2Q5SZK8 3169 aa5.74□□□□□ -1.49
ATXN3-249ENST00000564606 PCNX1Q96RV3 2341 aa5.74□□□□□ -1.49
ATXN3-249ENST00000564606 IGHV4-61A0A0C4DH41 118 aa5.74□□□□□ -1.49
ATXN3-249ENST00000564606 A0A0J9YX75 114 aa5.74□□□□□ -1.49
ATXN3-249ENST00000564606 LINC01548A6NM66 108 aa5.74□□□□□ -1.49
ATXN3-249ENST00000564606 H3BMG7 143 aa5.74□□□□□ -1.49
ATXN3-249ENST00000564606 J3KRW8 73 aa5.74□□□□□ -1.49
ATXN3-249ENST00000564606 M0QXV9 152 aa5.74□□□□□ -1.49
ATXN3-249ENST00000564606 IGHV3-11P01762 117 aa5.74□□□□□ -1.49
ATXN3-249ENST00000564606 PSMB8P28062 276 aa5.74□□□□□ -1.49
ATXN3-249ENST00000564606 CFHR3Q02985 330 aa5.74□□□□□ -1.49
ATXN3-249ENST00000564606 Q5PR19 223 aa5.74□□□□□ -1.49
ATXN3-249ENST00000564606 TMEM170BQ5T4T1 132 aa5.74□□□□□ -1.49
ATXN3-249ENST00000564606 BRD3OSQ6XYD6 125 aa5.74□□□□□ -1.49
ATXN3-249ENST00000564606 NFE4Q86UQ8 179 aa5.74□□□□□ -1.49
ATXN3-249ENST00000564606 PHLDA1Q8WV24 401 aaPredicted RBP5.74□□□□□ -1.49
ATXN3-249ENST00000564606 DNAJC30Q96LL9 226 aa5.74□□□□□ -1.49
ATXN3-249ENST00000564606 UBE2E2Q96LR5 201 aa5.74□□□□□ -1.49
ATXN3-249ENST00000564606 C9orf85Q96MD7 179 aa5.74□□□□□ -1.49
ATXN3-249ENST00000564606 SPXQ9BT56 116 aa5.74□□□□□ -1.49
ATXN3-249ENST00000564606 KLK15Q9H2R5 256 aa5.74□□□□□ -1.49
ATXN3-249ENST00000564606 YAE1D1Q9NRH1 226 aa5.74□□□□□ -1.49
ATXN3-249ENST00000564606 PYGO1Q9Y3Y4 419 aa5.74□□□□□ -1.49
ATXN3-249ENST00000564606 ABCA1O95477 2261 aa5.74□□□□□ -1.49
ATXN3-249ENST00000564606 ZFHX2Q9C0A1 2572 aaPredicted RBP5.74□□□□□ -1.49
ATXN3-249ENST00000564606 MYO15AQ9UKN7 3530 aa5.74□□□□□ -1.49
ATXN3-249ENST00000564606 PTPRZ1P23471 2315 aaPredicted RBP5.74□□□□□ -1.49
ATXN3-249ENST00000564606 FRYQ5TBA9 3013 aa5.73□□□□□ -1.49
ATXN3-249ENST00000564606 A0A1B0GV72 72 aa5.73□□□□□ -1.49
ATXN3-249ENST00000564606 IGIPA6NJ69 53 aa5.73□□□□□ -1.49
ATXN3-249ENST00000564606 H3BS24 57 aa5.73□□□□□ -1.49
ATXN3-249ENST00000564606 K7EQG2 157 aa5.73□□□□□ -1.49
ATXN3-249ENST00000564606 GNRH2O43555 120 aa5.73□□□□□ -1.49
ATXN3-249ENST00000564606 COX6CP09669 75 aa5.73□□□□□ -1.49
ATXN3-249ENST00000564606 GNLYP22749 145 aa5.73□□□□□ -1.49
ATXN3-249ENST00000564606 ZNF415Q09FC8 603 aa5.73□□□□□ -1.49
ATXN3-249ENST00000564606 SUMO4Q6EEV6 95 aa5.73□□□□□ -1.49
ATXN3-249ENST00000564606 DCANP1Q8TF63 244 aa5.73□□□□□ -1.49
ATXN3-249ENST00000564606 SPANXA1Q9NS26 97 aa5.73□□□□□ -1.49
ATXN3-249ENST00000564606 ZNF256Q9Y2P7 627 aaPredicted RBP5.73□□□□□ -1.49
ATXN3-249ENST00000564606 TNFRSF18Q9Y5U5 241 aa5.73□□□□□ -1.49
ATXN3-249ENST00000564606 KIF25-AS1Q9Y6Z4 181 aa5.73□□□□□ -1.49
ATXN3-249ENST00000564606 GVINP1Q7Z2Y8 2422 aa5.73□□□□□ -1.49
ATXN3-249ENST00000564606 DSPP15924 2871 aaKnown RBP5.72□□□□□ -1.49
ATXN3-249ENST00000564606 TRAV12-3A0A0B4J271 114 aa5.72□□□□□ -1.49
ATXN3-249ENST00000564606 IGHV3-16A0A0C4DH30 117 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms